PGS1, chr17:76374721-76421195 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4969188 chr17:76422473 DNAH17 All: C 108,990 15 T vs. C 0.258 (T) 0.042 (T) 0.92 (0.88-0.96) 0 (0-33) 5.75e-05
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9909863 chr17:76468046 DNAH17 C - 3 A vs. C - - <1 (-) 35 (-) >0.05
rs55960293 chr17:76467838 DNAH17 C - 13 A vs. G 0.108 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs7207782 chr17:76357378 SOCS3 [+1220bp] C - 12 A vs. G 0.425 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs12936911 chr17:76328278 SOCS3 [-24586bp] C - 8 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs1465984 chr17:76470381 DNAH17 C - 13 T vs. C 0.208 (T) 0.267 (T) <1 (-) 7 (-) >0.05
rs691800 chr17:76469442 DNAH17 C - 13 T vs. C - - >1 (-) 10 (-) >0.05
rs58030087 chr17:76331294 SOCS3 [-21570bp] C - 11 T vs. C 0.025 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs11658216 chr17:76344918 SOCS3 [-7946bp] C - 6 T vs. C - 0.342 (C) <1 (-) 23 (-) >0.05
rs62079152 chr17:76367106 PGS1 [-7615bp] C - 12 A vs. G 0.158 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs1465985 chr17:76470654 DNAH17 C - 13 A vs. G 0.208 (A) 0.25 (A) <1 (-) 7 (-) >0.05
rs77287357 chr17:76467122 DNAH17 C - 3 A vs. T - - >1 (-) 34 (-) >0.05
rs113393496 chr17:76368278 PGS1 [-6443bp] C - 12 A vs. G 0.167 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs4969144 chr17:76406084 PGS1 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs7215542 chr17:76368171 PGS1 [-6550bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs12942811 chr17:76406692 PGS1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs75758039 chr17:76458906 DNAH17 C - 12 A vs. G 0.1 (G) - <1 (-) 32 (-) >0.05
rs11868378 chr17:76357874 SOCS3 [+1716bp] C - 12 A vs. G 0.225 (G) 0.425 (A) >1 (-) 0 (-) >0.05
rs148962996 chr17:76384588 PGS1 C - 11 A vs. T - - >1 (-) 55 (-) >0.05
rs114378341 chr17:76421817 DNAH17 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs78502439 chr17:76460141 DNAH17 C - 12 A vs. G 0.1 (G) - <1 (-) 33 (-) >0.05
rs77493878 chr17:76458542 DNAH17 C - 11 A vs. G 0.1 (A) - >1 (-) 38 (-) >0.05
rs72925850 chr17:76443304 DNAH17 C - 8 T vs. C - - <1 (-) 6 (-) >0.05
rs113951371 chr17:76325620 SOCS3 [-27244bp] C - 12 T vs. C 0.042 (C) - <1 (-) 0 (-) >0.05
rs62079154 chr17:76373922 PGS1 [-799bp] C - 12 A vs. G 0.175 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs4283288 chr17:76338963 SOCS3 [-13901bp] C - 11 T vs. C 0.133 (T) 0.008 (T) >1 (-) 40 (-) >0.05
rs58683032 chr17:76350722 SOCS3 [-2142bp] C - 3 A vs. G 0.025 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs80140768 chr17:76332351 SOCS3 [-20513bp] C - 11 T vs. G - 0.075 (T) <1 (-) 10 (-) >0.05
rs73378198 chr17:76333428 SOCS3 [-19436bp] C - 11 T vs. C - 0.075 (C) >1 (-) 9 (-) >0.05
rs73378194 chr17:76333223 SOCS3 [-19641bp] C - 11 T vs. C 0.025 (T) 0.083 (T) <1 (-) 9 (-) >0.05
rs73998036 chr17:76333127 SOCS3 [-19737bp] C - 11 A vs. G 0.025 (A) 0.092 (A) <1 (-) 11 (-) >0.05
rs73998037 chr17:76333131 SOCS3 [-19733bp] C - 11 A vs. G 0.025 (A) 0.092 (A) <1 (-) 11 (-) >0.05
rs692308 chr17:76467946 DNAH17 C - 13 A vs. G 0.233 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs73380163 chr17:76335209 SOCS3 [-17655bp] C - 11 T vs. C 0.025 (C) 0.075 (C) >1 (-) 6 (-) >0.05
rs10468440 chr17:76439478 DNAH17 C - 13 A vs. G 0.075 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs640641 chr17:76468019 DNAH17 C - 13 A vs. G 0.233 (A) 0.267 (A) <1 (-) 0 (-) >0.05
rs692082 chr17:76468286 DNAH17 C - 13 T vs. C 0.117 (C) 0.092 (C) <1 (-) 6 (-) >0.05
rs7220649 chr17:76331757 SOCS3 [-21107bp] C - 11 T vs. C - - <1 (-) 10 (-) >0.05
rs35397088 chr17:76325098 SOCS3 [-27766bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs73378191 chr17:76332904 SOCS3 [-19960bp] C - 11 A vs. G - - >1 (-) 9 (-) >0.05
rs12945443 chr17:76327463 SOCS3 [-25401bp] C - 13 A vs. G 0.2 (A) - >1 (-) 3 (-) >0.05
rs62079134 chr17:76335153 SOCS3 [-17711bp] C - 12 T vs. C 0.1 (T) 0.308 (T) <1 (-) 11 (-) >0.05
rs692426 chr17:76440262 DNAH17 C - 13 T vs. C 0.075 (C) 0.133 (C) <1 (-) 0 (-) >0.05
rs79018056 chr17:76325864 SOCS3 [-27000bp] C - 12 T vs. C 0.092 (T) - >1 (-) 21 (-) >0.05
rs12944581 chr17:76348830 SOCS3 [-4034bp] C - 4 C vs. G 0.167 (G) 0.325 (G) >1 (-) 31 (-) >0.05
rs11649879 chr17:76439109 DNAH17 C - 13 T vs. C 0.075 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs117008916 chr17:76467063 DNAH17 C - 8 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs55972203 chr17:76381261 PGS1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9903316 chr17:76335239 SOCS3 [-17625bp] C - 12 C vs. G 0.083 (G) - <1 (-) 22 (-) >0.05
rs118023792 chr17:76342465 SOCS3 [-10399bp] C - 10 T vs. C 0.025 (C) - >1 (-) 15 (-) >0.05
chr17:76470919 chr17:76470919 DNAH17 C - 11 A vs. T - - >1 (-) 25 (-) >0.05

Association studies for this region [+]