PGS1, chr17:76374721-76421195 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4969188 chr17:76422473 DNAH17 All: C 108,990 15 T vs. C 0.258 (T) 0.042 (T) 0.92 (0.88-0.96) 0 (0-33) 5.75e-05
Meta_image?name=rs4969188

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112432312 chr17:76469397 DNAH17 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs55905899 chr17:76400221 PGS1 C - 12 T vs. C 0.1 (C) - <1 (-) 0 (-) >0.05
rs55818563 chr17:76387376 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs4490057 chr17:76375095 PGS1 C - 13 A vs. G 0.458 (A) 0.417 (G) >1 (-) 0 (-) >0.05
rs11871028 chr17:76404655 PGS1 C - 12 T vs. C 0.1 (T) - >1 (-) 0 (-) >0.05
rs116876036 chr17:76393762 PGS1 C - 12 T vs. C 0.1 (T) - >1 (-) 0 (-) >0.05
rs62075746 chr17:76386915 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs7222111 chr17:76386809 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs8075579 chr17:76469012 DNAH17 C - 13 C vs. G 0.108 (G) 0.167 (G) >1 (-) 0 (-) >0.05
rs62079153 chr17:76370896 PGS1 [-3825bp] C - 13 T vs. C 0.45 (C) 0.367 (T) <1 (-) 0 (-) >0.05
rs78318417 chr17:76470949 DNAH17 C - 13 A vs. G - - >1 (-) 22 (-) >0.05
rs56658017 chr17:76396164 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs74001351 chr17:76469323 DNAH17 C - 13 T vs. C 0.108 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs113417153 chr17:76373179 PGS1 [-1542bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12951460 chr17:76370557 PGS1 [-4164bp] C - 13 T vs. C 0.45 (C) 0.408 (T) <1 (-) 0 (-) >0.05
rs11658269 chr17:76345109 SOCS3 [-7755bp] C - 9 A vs. C 0.117 (A) 0.025 (A) >1 (-) 49 (-) >0.05
rs72911395 chr17:76391386 PGS1 C - 13 A vs. T 0.058 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs7221930 chr17:76386578 PGS1 C - 12 T vs. G 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs12602692 chr17:76403590 PGS1 C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs8072820 chr17:76385381 PGS1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs11871046 chr17:76404786 PGS1 C - 12 T vs. C 0.1 (T) - >1 (-) 0 (-) >0.05
rs8068866 chr17:76385267 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs56327721 chr17:76405302 PGS1 C - 12 T vs. C 0.1 (T) - >1 (-) 0 (-) >0.05
rs79423778 chr17:76453722 DNAH17 C - 9 T vs. C 0.075 (T) - >1 (-) 35 (-) >0.05
rs635874 chr17:76464916 DNAH17 C - 13 A vs. G 0.108 (A) 0.075 (A) >1 (-) 12 (-) >0.05
rs59448037 chr17:76389120 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs55829039 chr17:76398268 PGS1 C - 9 T vs. G 0.017 (T) - >1 (-) 0 (-) >0.05
rs12453354 chr17:76380126 PGS1 C - 13 A vs. G 0.058 (A) 0.15 (A) <1 (-) 0 (-) >0.05
rs62075745 chr17:76384680 PGS1 C - 12 A vs. G 0.1 (A) - >1 (-) 0 (-) >0.05
rs4969145 chr17:76406170 PGS1 C - 13 T vs. C 0.367 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs8072666 chr17:76385331 PGS1 C - 12 A vs. C - 0.058 (A) >1 (-) 0 (-) >0.05
rs72899786 chr17:76368299 PGS1 [-6422bp] C - 13 T vs. C - 0.15 (C) >1 (-) 3 (-) >0.05
rs62075744 chr17:76384438 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs72899785 chr17:76368295 PGS1 [-6426bp] C - 13 A vs. G - 0.133 (G) >1 (-) 3 (-) >0.05
rs62075742 chr17:76384278 PGS1 C - 12 C vs. G 0.1 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs113938217 chr17:76344959 SOCS3 [-7905bp] C - 9 A vs. C 0.142 (C) - <1 (-) 23 (-) >0.05
rs3817295 chr17:76394526 PGS1 C - 13 A vs. T 0.367 (T) 0.458 (T) <1 (-) 0 (-) >0.05
rs62075739 chr17:76383333 PGS1 C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs3744217 chr17:76400258 PGS1 C - 13 A vs. G 0.367 (G) 0.483 (A) <1 (-) 0 (-) >0.05
rs8068516 chr17:76385021 PGS1 C - 12 T vs. C 0.1 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs62075741 chr17:76384220 PGS1 C - 12 A vs. G 0.1 (A) - >1 (-) 0 (-) >0.05
rs62075743 chr17:76384315 PGS1 C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs8075131 chr17:76394595 PGS1 C - 13 T vs. G 0.367 (T) 0.458 (T) >1 (-) 0 (-) >0.05
rs111432639 chr17:76398636 PGS1 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs6501208 chr17:76395038 PGS1 C - 13 A vs. T 0.358 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs8076673 chr17:76331404 SOCS3 [-21460bp] C - 12 A vs. G 0.15 (G) - >1 (-) 0 (-) >0.05
rs16971107 chr17:76394042 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs16971105 chr17:76393975 PGS1 C - 13 T vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs12944051 chr17:76395856 PGS1 C - 13 A vs. G 0.367 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs3826323 chr17:76400268 PGS1 C - 13 C vs. G 0.358 (C) 0.483 (G) >1 (-) 0 (-) >0.05

Association studies for this region [+]