PGS1, chr17:76374721-76421195 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4969188 chr17:76422473 DNAH17 All: C 108,990 15 T vs. C 0.258 (T) 0.042 (T) 0.92 (0.88-0.96) 0 (0-33) 5.75e-05
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7208596 chr17:76396528 PGS1 C - 13 C vs. G 0.375 (C) 0.458 (C) >1 (-) 0 (-) >0.05
rs8069695 chr17:76385044 PGS1 C - 12 T vs. C 0.108 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs12451791 chr17:76397343 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs73999306 chr17:76384534 PGS1 C - 12 T vs. C 0.042 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs57205765 chr17:76470983 DNAH17 C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs4969185 chr17:76398157 PGS1 C - 13 C vs. G 0.4 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs4969186 chr17:76398404 PGS1 C - 13 C vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs73999305 chr17:76384533 PGS1 C - 12 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs2292643 chr17:76395421 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs2292642 chr17:76395430 PGS1 C - 13 T vs. C 0.367 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs137880864 chr17:76326219 SOCS3 [-26645bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs3817294 chr17:76396963 PGS1 C - 13 A vs. G 0.367 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs7212201 chr17:76393896 PGS1 C - 13 A vs. C 0.375 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs12943881 chr17:76369670 PGS1 [-5051bp] C - 13 T vs. C 0.392 (C) 0.292 (T) <1 (-) 0 (-) >0.05
rs73378182 chr17:76328254 SOCS3 [-24610bp] C - 11 T vs. C 0.033 (T) 0.075 (T) <1 (-) 9 (-) >0.05
rs3744219 chr17:76400236 PGS1 C - 13 A vs. G 0.392 (G) 0.492 (A) <1 (-) 0 (-) >0.05
rs11077363 chr17:76397309 PGS1 C - 13 T vs. C 0.375 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs12451715 chr17:76397334 PGS1 C - 13 A vs. C 0.367 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs4789588 chr17:76333081 SOCS3 [-19783bp] C - 12 T vs. C 0.15 (T) - <1 (-) 0 (-) >0.05
rs6501207 chr17:76364099 SOCS3 [+7941bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs56971055 chr17:76382296 PGS1 C - 12 A vs. C 0.117 (C) 0.433 (C) >1 (-) 4 (-) >0.05
rs938350 chr17:76399552 PGS1 C - 13 A vs. G 0.367 (G) 0.492 (A) <1 (-) 0 (-) >0.05
rs8071884 chr17:76398058 PGS1 C - 13 C vs. G 0.367 (C) 0.458 (C) >1 (-) 0 (-) >0.05
rs4580257 chr17:76403028 PGS1 C - 13 T vs. G 0.375 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs62075738 chr17:76383319 PGS1 C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs2292640 chr17:76396610 PGS1 C - 13 A vs. G 0.367 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs12450500 chr17:76395750 PGS1 C - 13 T vs. C 0.367 (C) 0.45 (C) <1 (-) 0 (-) >0.05
rs12450528 chr17:76395753 PGS1 C - 13 A vs. G 0.367 (G) 0.45 (G) <1 (-) 0 (-) >0.05
rs11077362 chr17:76397219 PGS1 C - 13 A vs. T 0.367 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs12952093 chr17:76363640 SOCS3 [+7482bp] C - 12 A vs. C 0.292 (A) 0.475 (C) <1 (-) 0 (-) >0.05
rs1976704 chr17:76401318 PGS1 C - 13 T vs. C 0.383 (C) 0.492 (T) <1 (-) 0 (-) >0.05
rs74001354 chr17:76470975 DNAH17 C - 12 T vs. C - 0.142 (C) >1 (-) 7 (-) >0.05
rs62073523 chr17:76470275 DNAH17 C - 13 A vs. C 0.083 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs72907449 chr17:76426486 DNAH17 C - 3 A vs. C 0.025 (A) - >1 (-) 21 (-) >0.05
rs8072632 chr17:76397830 PGS1 C - 13 T vs. C 0.367 (T) 0.458 (T) >1 (-) 0 (-) >0.05
rs636570 chr17:76457060 DNAH17 C - 11 A vs. G 0.075 (A) - >1 (-) 34 (-) >0.05
rs9897751 chr17:76470043 DNAH17 C - 13 A vs. G 0.083 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs8071889 chr17:76398101 PGS1 C - 13 A vs. G 0.367 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs12451109 chr17:76389176 PGS1 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs4325635 chr17:76338800 SOCS3 [-14064bp] C - 12 A vs. G 0.167 (A) - <1 (-) 27 (-) >0.05
rs75039282 chr17:76343993 SOCS3 [-8871bp] C - 12 T vs. C 0.167 (C) 0.042 (C) >1 (-) 26 (-) >0.05
rs62080360 chr17:76382179 PGS1 C - 12 T vs. C 0.092 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs11653278 chr17:76341560 SOCS3 [-11304bp] C - 12 A vs. G 0.167 (A) - <1 (-) 27 (-) >0.05
rs11077361 chr17:76397128 PGS1 C - 13 A vs. G 0.383 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs12602206 chr17:76397133 PGS1 C - 13 A vs. G 0.383 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs4371218 chr17:76338899 SOCS3 [-13965bp] C - 12 A vs. G 0.167 (G) 0.067 (G) >1 (-) 27 (-) >0.05
rs8070806 chr17:76381743 PGS1 C - 12 A vs. C 0.092 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs12953258 chr17:76356096 SOCS3 C - 12 T vs. G - - <1 (-) 6 (-) >0.05
rs12949584 chr17:76359571 SOCS3 [+3413bp] C - 12 T vs. C - - <1 (-) 6 (-) >0.05
rs12449849 chr17:76334260 SOCS3 [-18604bp] C - 9 A vs. G - - >1 (-) 19 (-) >0.05

Association studies for this region [+]