PKNOX1, chr21:44394620-44453691 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34637056 chr21:44355115 MIR5692B [-15923bp] All: C 108,990 15 C vs. T 0.442 (C) 0.117 (C) 1.10 (1.06-1.14) 45 (0-70) 3.54e-07
Meta_image?name=rs34637056

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34637056 chr21:44355115 MIR5692B [-15923bp] All: C 108,990 15 C vs. T 0.442 (C) 0.117 (C) 1.10 (1.06-1.14) 45 (0-70) 3.54e-07
rs452142 chr21:44412809 PKNOX1 All: C 108,990 15 G vs. A 0.258 (G) - 1.10 (1.05-1.14) 1 (0-54) 5.04e-06
rs2187248 chr21:44357419 MIR5692B [-13619bp] All: C 108,990 15 G vs. T - - 1.08 (1.05-1.12) 0 (0-51) 6.78e-06
rs8128471 chr21:44357289 MIR5692B [-13749bp] All: C 108,990 15 T vs. C - - 1.08 (1.05-1.12) 9 (0-46) 9.12e-06
rs7283165 chr21:44352353 MIR5692B [-18685bp] All: C 108,990 15 G vs. T - - 1.08 (1.04-1.12) 5 (0-56) 1.14e-05
rs7282181 chr21:44357886 MIR5692B [-13152bp] All: C 108,990 15 G vs. A 0.433 (G) 0.292 (G) 1.08 (1.04-1.12) 30 (0-62) 1.16e-05
rs7277837 chr21:44352457 MIR5692B [-18581bp] C - 13 C vs. G - 0.25 (C) >1 (-) 0 (-) <1.00e-04
rs6586268 chr21:44349295 NDUFV3 [+15881bp] C - 13 C vs. G - 0.267 (C) >1 (-) 0 (-) <1.00e-04
rs4919956 chr21:44356460 MIR5692B [-14578bp] All: C 108,990 15 C vs. T 0.317 (C) 0.3 (T) 0.93 (0.90-0.96) 3 (0-55) 1.62e-05
rs9647277 chr21:44351922 NDUFV3 [+18508bp] All: C 108,990 15 A vs. G 0.325 (A) 0.3 (G) 0.93 (0.90-0.96) 3 (0-55) 1.85e-05
rs11909033 chr21:44351663 NDUFV3 [+18249bp] All: C 108,990 15 A vs. G 0.325 (A) 0.3 (G) 0.93 (0.90-0.96) 3 (0-55) 1.96e-05
rs9979193 chr21:44346385 NDUFV3 [+12971bp] All: C 108,990 15 G vs. A 0.317 (G) 0.3 (A) 0.93 (0.90-0.96) 4 (0-56) 2.40e-05
rs6586266 chr21:44345686 NDUFV3 [+12272bp] C - 13 A vs. G 0.317 (A) 0.275 (G) <1 (-) 0 (-) <1.00e-04
rs13049906 chr21:44346705 NDUFV3 [+13291bp] All: C 108,990 15 C vs. A - - 1.07 (1.04-1.11) 7 (0-57) 2.59e-05
rs418639 chr21:44468843 CBS [-4458bp] All: C 108,990 15 G vs. A 0.258 (G) - 1.09 (1.05-1.13) 0 (0-44) 2.62e-05
rs13046174 chr21:44348243 NDUFV3 [+14829bp] All: C 108,990 15 G vs. A 0.325 (G) 0.292 (A) 0.93 (0.90-0.96) 5 (0-56) 2.74e-05
rs8128260 chr21:44347082 NDUFV3 [+13668bp] All: C 108,990 15 T vs. G - - 1.07 (1.04-1.11) 3 (0-55) 2.78e-05
rs13046774 chr21:44348762 NDUFV3 [+15348bp] All: C 108,990 15 T vs. C 0.35 (T) 0.3 (C) 0.93 (0.90-0.96) 1 (0-54) 2.96e-05
rs8129176 chr21:44347011 NDUFV3 [+13597bp] All: C 108,990 15 A vs. C - - 1.07 (1.04-1.11) 2 (0-55) 3.14e-05
rs7276126 chr21:44345320 NDUFV3 [+11906bp] All: C 108,990 15 T vs. G - - 1.07 (1.04-1.11) 0 (0-52) 3.19e-05
rs234731 chr21:44449389 PKNOX1 All: C 108,990 15 A vs. G 0.325 (A) 0.033 (A) 1.08 (1.04-1.11) 0 (0-51) 3.82e-05
rs6586265 chr21:44345180 NDUFV3 [+11766bp] All: C 108,990 15 T vs. C - - 1.07 (1.04-1.11) 0 (0-51) 4.13e-05
rs35879780 chr21:44413457 PKNOX1 All: C 108,990 15 A vs. G 0.142 (A) - 1.11 (1.06-1.16) 0 (0-48) 4.84e-05
rs11910485 chr21:44346090 NDUFV3 [+12676bp] C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs12626395 chr21:44348640 NDUFV3 [+15226bp] C - 13 A vs. C - - <1 (-) 0 (-) <0.05
rs234690 chr21:44431358 PKNOX1 All: C 108,990 15 T vs. G - - 0.94 (0.90-0.97) 6 (0-57) 3.94e-04
rs147174302 chr21:44346314 NDUFV3 [+12900bp] C - 13 A vs. G - - >1 (-) 27 (-) <0.05
rs13049993 chr21:44347820 NDUFV3 [+14406bp] C - 13 A vs. T - - >1 (-) 28 (-) <0.05
rs62217562 chr21:44350854 NDUFV3 [+17440bp] C - 13 T vs. C - - >1 (-) 28 (-) <0.05
rs12373949 chr21:44357077 MIR5692B [-13961bp] C - 13 T vs. G - - <1 (-) 31 (-) <0.05
rs62217560 chr21:44345904 NDUFV3 [+12490bp] C - 13 A vs. G 0.275 (A) - >1 (-) 24 (-) <0.05
rs13052802 chr21:44345369 NDUFV3 [+11955bp] C - 13 T vs. C 0.267 (C) - <1 (-) 24 (-) <0.05
rs35612957 chr21:44344813 NDUFV3 [+11399bp] C - 13 T vs. C 0.275 (T) - >1 (-) 24 (-) <0.05
rs365838 chr21:44374852 MIR5692B [+3728bp] C - 13 A vs. G 0.258 (A) 0.158 (A) >1 (-) 22 (-) <0.05
rs62217610 chr21:44358481 MIR5692B [-12557bp] C - 13 A vs. C 0.275 (A) - >1 (-) 22 (-) <0.05
rs6586267 chr21:44345966 NDUFV3 [+12552bp] C - 11 A vs. G 0.417 (G) 0.175 (A) >1 (-) 0 (-) <0.05
rs8132037 chr21:44350961 NDUFV3 [+17547bp] C - 13 T vs. G 0.425 (G) 0.175 (T) >1 (-) 0 (-) <0.05
rs234756 chr21:44418436 PKNOX1 C - 13 T vs. C 0.267 (T) - >1 (-) 19 (-) <0.05
rs234770 chr21:44424041 PKNOX1 C - 13 T vs. G 0.258 (T) 0.05 (T) >1 (-) 15 (-) <0.05
rs427925 chr21:44400045 PKNOX1 C - 13 A vs. G 0.25 (A) 0.058 (A) >1 (-) 17 (-) <0.05
rs234768 chr21:44422595 PKNOX1 C - 13 C vs. G 0.258 (G) 0.058 (G) <1 (-) 19 (-) <0.05
rs442965 chr21:44412676 PKNOX1 C - 13 T vs. C 0.258 (T) 0.033 (T) >1 (-) 17 (-) <0.05
rs234751 chr21:44415466 PKNOX1 C - 13 T vs. C 0.267 (C) 0.042 (C) <1 (-) 17 (-) <0.05
rs1672137 chr21:44403363 PKNOX1 C - 13 C vs. G 0.233 (G) 0.05 (G) <1 (-) 15 (-) <0.05
rs234696 chr21:44434217 PKNOX1 C - 13 T vs. C - - >1 (-) 14 (-) <0.05
rs411907 chr21:44457835 PKNOX1 [+4144bp] C - 13 C vs. G 0.267 (C) 0.05 (C) >1 (-) 14 (-) <0.05
rs1788473 chr21:44410402 PKNOX1 C - 13 T vs. C 0.258 (T) 0.033 (T) >1 (-) 17 (-) <0.05
rs234693 chr21:44432880 PKNOX1 C - 13 C vs. G 0.258 (C) 0.058 (C) >1 (-) 14 (-) <0.05
rs234776 chr21:44426479 PKNOX1 C - 13 A vs. G - - >1 (-) 16 (-) <0.05
rs170918 chr21:44428347 PKNOX1 C - 13 A vs. G 0.258 (A) 0.05 (A) >1 (-) 15 (-) <0.05

Association studies for this region [+]