PMVK, chr1:154897210-154909467 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34195153 chr1:154913723 PBXIP1 [-2829bp] All: C 99,075 12 C vs. G - - 0.64 (0.55-0.75) 0 (0-32) 3.09e-08
Meta_image?name=rs34195153

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34195153 chr1:154913723 PBXIP1 [-2829bp] All: C 99,075 12 C vs. G - - 0.64 (0.55-0.75) 0 (0-32) 3.09e-08
rs114138760 chr1:154898185 PMVK All: C 105,041 14 C vs. G 0.017 (C) - 1.50 (1.27-1.77) 0 (0-24) 2.18e-06
rs114853077 chr1:154852735 KCNN3 [+9979bp] All: C 99,521 13 T vs. C 0.017 (T) - 1.35 (1.18-1.54) 10 (0-49) 8.52e-06
rs41264253 chr1:154918352 PBXIP1 C - 13 A vs. G 0.083 (A) - <1 (-) 0 (-) <0.05
rs115965397 chr1:154853910 KCNN3 [+11154bp] C - 9 A vs. G 0.017 (G) - >1 (-) 39 (-) <0.05
rs3766921 chr1:154935253 PYGO2 C - 13 C vs. G 0.008 (C) - >1 (-) 0 (-) <0.05
rs11585145 chr1:154947496 CKS1B C - 13 A vs. T 0.017 (T) - <1 (-) 0 (-) <0.05
rs1131397 chr1:154938235 SHC1 C - 13 C vs. G 0.017 (C) - >1 (-) 0 (-) <0.05
rs16836580 chr1:154945047 SHC1 C - 13 A vs. G 0.017 (A) - >1 (-) 0 (-) <0.05
rs8191979 chr1:154938662 SHC1 C - 13 T vs. C 0.017 (C) - <1 (-) 0 (-) <0.05
rs12076073 chr1:154944156 SHC1 C - 13 A vs. G 0.017 (G) - <1 (-) 0 (-) <0.05
rs11590058 chr1:154956985 FLAD1 C - 13 T vs. C - - >1 (-) 1 (-) <0.05
rs12075984 chr1:154943881 SHC1 C - 13 A vs. G 0.017 (G) - <1 (-) 0 (-) <0.05
rs6661212 chr1:154946696 SHC1 C - 13 A vs. C 0.017 (C) - <1 (-) 0 (-) <0.05
rs12096640 chr1:154958067 FLAD1 C - 13 T vs. C - - >1 (-) 3 (-) <0.05
rs11264293 chr1:154946517 SHC1 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs10908449 chr1:154955724 FLAD1 [-90bp] C - 13 T vs. C 0.017 (T) - >1 (-) 0 (-) <0.05
rs6696397 chr1:154956662 FLAD1 C - 13 A vs. C 0.008 (A) - >1 (-) 0 (-) <0.05
rs147350405 chr1:154922599 PBXIP1 C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs6695407 chr1:154928707 PBXIP1 [+108bp] C - 13 A vs. G 0.017 (A) - >1 (-) 0 (-) <0.05
rs7528548 chr1:154934665 PYGO2 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs115973322 chr1:154886959 PMVK [-10251bp] C - 11 A vs. G 0.025 (A) - >1 (-) 1 (-) <0.05
rs75001385 chr1:154910729 PMVK [+1262bp] C - 10 T vs. C 0.025 (T) - >1 (-) 5 (-) <0.05
rs116667122 chr1:154883461 PMVK [-13749bp] C - 11 T vs. G 0.025 (T) - >1 (-) 0 (-) <0.05
rs75276445 chr1:154900061 PMVK C - 10 T vs. G 0.025 (T) - >1 (-) 10 (-) >0.05
rs4578216 chr1:154900721 PMVK C - 13 T vs. C 0.308 (C) 0.1 (C) >1 (-) 0 (-) >0.05
rs76664500 chr1:154899275 PMVK C - 11 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs116448674 chr1:154905310 PMVK C - 13 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs6696628 chr1:154906974 PMVK C - 13 T vs. C 0.05 (C) - <1 (-) 34 (-) >0.05
rs11799384 chr1:154906622 PMVK C - 13 C vs. G 0.033 (C) - >1 (-) 34 (-) >0.05
rs11589126 chr1:154899673 PMVK C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs11581175 chr1:154908258 PMVK C - 13 A vs. C 0.042 (A) - >1 (-) 34 (-) >0.05
rs7543051 chr1:154905179 PMVK C - 13 A vs. G 0.05 (G) - <1 (-) 35 (-) >0.05
rs1891805 chr1:154904840 PMVK C - 13 T vs. C 0.05 (C) - <1 (-) 35 (-) >0.05
rs6689022 chr1:154904230 PMVK C - 13 T vs. C 0.05 (C) - <1 (-) 35 (-) >0.05
rs12087657 chr1:154948327 CKS1B C - 13 T vs. G 0.333 (T) 0.017 (T) <1 (-) 0 (-) >0.05
rs11264286 chr1:154903047 PMVK C - 13 A vs. G 0.05 (A) - >1 (-) 35 (-) >0.05
rs11264287 chr1:154903583 PMVK C - 13 T vs. C 0.05 (T) - >1 (-) 35 (-) >0.05
rs7539805 chr1:154903921 PMVK C - 13 T vs. C 0.05 (C) - <1 (-) 35 (-) >0.05
rs143522632 chr1:154873864 PMVK [-23346bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs149026539 chr1:154889053 PMVK [-8157bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs148800700 chr1:154915278 PBXIP1 [-1274bp] C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs74116247 chr1:154899536 PMVK C - 13 T vs. G 0.025 (T) - >1 (-) 0 (-) >0.05
rs77715381 chr1:154888198 PMVK [-9012bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs79870157 chr1:154860748 KCNN3 [+17992bp] C - 13 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs151107921 chr1:154892388 PMVK [-4822bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs147942152 chr1:154886509 PMVK [-10701bp] C - 3 A vs. G - - >1 (-) 37 (-) >0.05
rs112385928 chr1:154850662 KCNN3 [+7906bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs76875541 chr1:154868172 KCNN3 [+25416bp] C - 13 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs114056923 chr1:154868744 KCNN3 [+25988bp] C - 13 T vs. C 0.025 (C) - >1 (-) 0 (-) >0.05

Association studies for this region [+]