PODN, chr1:53527854-53551174 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34107528 chr1:53537396 PODN C - 13 A vs. G 0.033 (A) - >1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17107713 chr1:53503239 SCP2 C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs6689450 chr1:53492637 SCP2 C - 13 A vs. T - 0.383 (A) >1 (-) 3 (-) >0.05
rs11206072 chr1:53484234 SCP2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs78030880 chr1:53586010 SLC1A7 C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs72903200 chr1:53506814 SCP2 C - 13 A vs. G - - >1 (-) 13 (-) >0.05
rs11206103 chr1:53589130 SLC1A7 C - 13 A vs. G 0.1 (A) 0.158 (A) >1 (-) 0 (-) >0.05
rs10788947 chr1:53513168 SCP2 C - 13 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs74550275 chr1:53514385 SCP2 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs17107812 chr1:53532920 PODN C - 13 A vs. C 0.033 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs78096409 chr1:53536236 PODN C - 13 T vs. C - 0.233 (C) <1 (-) 0 (-) >0.05
rs76248987 chr1:53532984 PODN C - 13 T vs. C 0.033 (C) 0.25 (C) <1 (-) 0 (-) >0.05
rs78175275 chr1:53535055 PODN C - 13 A vs. G 0.033 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs4926944 chr1:53490068 SCP2 C - 13 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs1531698 chr1:53535085 PODN C - 13 T vs. C 0.033 (T) 0.25 (T) >1 (-) 0 (-) >0.05
rs1531700 chr1:53535205 PODN C - 13 T vs. C 0.033 (T) 0.25 (T) >1 (-) 0 (-) >0.05
rs61768116 chr1:53585254 SLC1A7 C - 13 A vs. G 0.05 (A) - >1 (-) 0 (-) >0.05
rs1531702 chr1:53535269 PODN C - 13 A vs. G 0.033 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs1531703 chr1:53535443 PODN C - 13 A vs. G 0.033 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs4926950 chr1:53534588 PODN C - 13 T vs. C 0.033 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs72903119 chr1:53490746 SCP2 C - 13 A vs. T 0.033 (T) 0.083 (T) <1 (-) 9 (-) >0.05
rs56054926 chr1:53527996 PODN C - 13 A vs. G - 0.383 (G) <1 (-) 20 (-) >0.05
rs3766767 chr1:53560301 SLC1A7 C - 13 T vs. C 0.242 (T) 0.467 (T) >1 (-) 0 (-) >0.05
rs74082410 chr1:53528955 PODN C - 13 A vs. G 0.025 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs2306459 chr1:53554305 SLC1A7 C - 13 A vs. G 0.033 (A) 0.425 (A) <1 (-) 0 (-) >0.05
rs61181386 chr1:53527132 PODN [-722bp] C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs4926948 chr1:53533333 PODN C - 13 A vs. G 0.067 (G) 0.117 (G) >1 (-) 15 (-) >0.05
rs11588200 chr1:53512519 SCP2 C - 13 T vs. G 0.025 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs10888762 chr1:53519218 SCP2 [+1843bp] C - 13 T vs. C 0.092 (T) 0.4 (T) >1 (-) 0 (-) >0.05
rs11206079 chr1:53513423 SCP2 C - 13 T vs. C 0.025 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs4348672 chr1:53513837 SCP2 C - 13 C vs. G 0.017 (C) 0.033 (C) >1 (-) 0 (-) >0.05
rs4599997 chr1:53513768 SCP2 C - 13 C vs. G 0.017 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs6664654 chr1:53514350 SCP2 C - 13 T vs. C 0.025 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs57866820 chr1:53577370 SLC1A7 C - 10 T vs. C - - >1 (-) 9 (-) >0.05
rs2896792 chr1:53513982 SCP2 C - 13 T vs. C - 0.033 (T) >1 (-) 0 (-) >0.05
rs11206081 chr1:53514066 SCP2 C - 13 C vs. G 0.025 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs60537900 chr1:53519464 SCP2 [+2089bp] C - 13 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs60905879 chr1:53519646 SCP2 [+2271bp] C - 13 A vs. G 0.025 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs58313958 chr1:53519716 SCP2 [+2341bp] C - 13 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs61312635 chr1:53526879 PODN [-975bp] C - 13 T vs. C 0.067 (C) 0.35 (C) <1 (-) 0 (-) >0.05
rs6697308 chr1:53534687 PODN C - 13 C vs. G 0.033 (G) 0.25 (G) <1 (-) 0 (-) >0.05
rs58924052 chr1:53565054 SLC1A7 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs2275453 chr1:53535876 PODN C - 13 T vs. C - 0.25 (C) <1 (-) 0 (-) >0.05
rs12096165 chr1:53518049 SCP2 [+674bp] C - 13 T vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs144075046 chr1:53573340 SLC1A7 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs17107767 chr1:53517997 SCP2 [+622bp] C - 13 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs6421492 chr1:53511341 SCP2 C - 13 A vs. T 0.058 (A) 0.1 (A) >1 (-) 1 (-) >0.05
rs11577650 chr1:53519436 SCP2 [+2061bp] C - 13 A vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs12070497 chr1:53518235 SCP2 [+860bp] C - 13 T vs. C 0.025 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs7534827 chr1:53515596 SCP2 C - 13 A vs. G 0.025 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs4926946 chr1:53515101 SCP2 C - 13 A vs. C 0.025 (A) 0.033 (A) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.