PODN, chr1:53527854-53551174 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34107528 chr1:53537396 PODN C - 13 A vs. G 0.033 (A) - >1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs946593 chr1:53596228 SLC1A7 C - 13 T vs. C 0.283 (C) 0.258 (C) <1 (-) 36 (-) >0.05
rs74529778 chr1:53503274 SCP2 C - 10 T vs. G - 0.067 (G) >1 (-) 40 (-) >0.05
rs1288406 chr1:53558270 SLC1A7 C - 12 A vs. G 0.217 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs1288389 chr1:53544597 PODN C - 13 T vs. C 0.092 (T) 0.292 (C) <1 (-) 0 (-) >0.05
rs116221956 chr1:53513007 SCP2 C - 11 A vs. G 0.025 (G) - >1 (-) 28 (-) >0.05
rs79560803 chr1:53564492 SLC1A7 C - 10 T vs. C 0.033 (T) - >1 (-) 43 (-) >0.05
rs6667002 chr1:53593925 SLC1A7 C - 13 T vs. C 0.233 (C) - <1 (-) 0 (-) >0.05
rs12138818 chr1:53581886 SLC1A7 C - 8 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs116623976 chr1:53569237 SLC1A7 C - 7 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs1769316 chr1:53537266 PODN C - 11 A vs. G 0.375 (A) 0.283 (G) <1 (-) 0 (-) >0.05
rs12747412 chr1:53503282 SCP2 C - 12 T vs. C 0.483 (T) - >1 (-) 0 (-) >0.05
rs1288386 chr1:53535478 PODN C - 12 A vs. G 0.358 (A) 0.383 (G) <1 (-) 5 (-) >0.05
rs1288375 chr1:53579583 SLC1A7 C - 12 A vs. G 0.392 (G) 0.142 (A) >1 (-) 41 (-) >0.05
rs12132507 chr1:53482013 SCP2 C - 12 A vs. G 0.467 (G) - <1 (-) 0 (-) >0.05
rs116409305 chr1:53577298 SLC1A7 C - 8 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs17107576 chr1:53482526 SCP2 C - 10 T vs. C - 0.3 (C) >1 (-) 43 (-) >0.05
rs1769309 chr1:53590871 SLC1A7 C - 13 A vs. G 0.425 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs2790427 chr1:53530786 PODN C - 12 A vs. G 0.35 (G) - >1 (-) 0 (-) >0.05
rs3766776 chr1:53567618 SLC1A7 C - 13 A vs. C 0.092 (A) 0.442 (A) <1 (-) 0 (-) >0.05
rs931158 chr1:53598630 SLC1A7 C - 13 A vs. G 0.275 (A) 0.342 (A) >1 (-) 34 (-) >0.05
rs74082711 chr1:53588126 SLC1A7 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs36026049 chr1:53587664 SLC1A7 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs1769299 chr1:53585723 SLC1A7 C - 13 T vs. G 0.458 (G) 0.325 (T) <1 (-) 0 (-) >0.05
rs1679977 chr1:53588494 SLC1A7 C - 13 A vs. G 0.433 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs1288362 chr1:53513437 SCP2 C - 12 T vs. C 0.367 (C) 0.292 (C) >1 (-) 0 (-) >0.05
rs146215744 chr1:53592869 SLC1A7 C - 12 T vs. C - - <1 (-) 32 (-) >0.05
rs78246083 chr1:53489169 SCP2 C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs145346903 chr1:53599073 SLC1A7 C - 4 T vs. C - - <1 (-) 35 (-) >0.05
rs1383599 chr1:53592123 SLC1A7 C - 11 C vs. G 0.017 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs2806271 chr1:53587718 SLC1A7 C - 13 T vs. C 0.45 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs12087013 chr1:53568171 SLC1A7 C - 12 A vs. G - 0.225 (G) >1 (-) 0 (-) >0.05
rs11590819 chr1:53597998 SLC1A7 C - 13 A vs. G 0.092 (A) 0.025 (A) >1 (-) 0 (-) >0.05
rs11206106 chr1:53597703 SLC1A7 C - 13 A vs. G 0.167 (A) 0.258 (A) <1 (-) 14 (-) >0.05
rs3766791 chr1:53588988 SLC1A7 C - 13 A vs. G 0.2 (A) 0.067 (A) >1 (-) 0 (-) >0.05
rs4926955 chr1:53598104 SLC1A7 C - 13 A vs. G 0.167 (G) 0.242 (G) >1 (-) 14 (-) >0.05
rs936642 chr1:53586380 SLC1A7 C - 13 A vs. C 0.2 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs12406773 chr1:53600917 SLC1A7 C - 13 T vs. C 0.258 (T) 0.317 (T) >1 (-) 18 (-) >0.05
rs3766795 chr1:53591707 SLC1A7 C - 13 T vs. C 0.208 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs3820202 chr1:53587612 SLC1A7 C - 13 T vs. G 0.2 (T) 0.075 (T) >1 (-) 0 (-) >0.05
rs11206094 chr1:53567788 SLC1A7 C - 13 T vs. C - 0.233 (C) >1 (-) 0 (-) >0.05
rs74082709 chr1:53586784 SLC1A7 C - 7 C vs. G - - >1 (-) 0 (-) >0.05
rs141267023 chr1:53541458 PODN C - 9 A vs. G - - <1 (-) 55 (-) >0.05
rs2242275 chr1:53569432 SLC1A7 C - 10 T vs. C - 0.217 (T) <1 (-) 0 (-) >0.05
rs11206101 chr1:53570659 SLC1A7 C - 13 A vs. G - 0.217 (A) <1 (-) 0 (-) >0.05
rs74807762 chr1:53560171 SLC1A7 C - 13 A vs. G - 0.233 (A) <1 (-) 0 (-) >0.05
rs1288372 chr1:53577284 SLC1A7 C - 12 A vs. G 0.333 (G) 0.383 (G) >1 (-) 27 (-) >0.05
rs1288371 chr1:53576592 SLC1A7 C - 12 T vs. C 0.333 (T) 0.208 (T) <1 (-) 34 (-) >0.05
rs11206104 chr1:53592830 SLC1A7 C - 13 A vs. G 0.2 (G) 0.317 (G) <1 (-) 35 (-) >0.05
rs12089128 chr1:53557644 SLC1A7 C - 13 T vs. C - 0.233 (T) <1 (-) 0 (-) >0.05
rs72670883 chr1:53598160 SLC1A7 C - 13 T vs. C 0.2 (T) 0.283 (T) >1 (-) 18 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.