PODN, chr1:53527854-53551174 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34107528 chr1:53537396 PODN C - 13 A vs. G 0.033 (A) - >1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7546714 chr1:53488564 SCP2 C - 13 A vs. T 0.092 (A) 0.4 (A) >1 (-) 5 (-) >0.05
rs58140496 chr1:53479298 SCP2 C - 13 A vs. G 0.025 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs3820201 chr1:53581670 SLC1A7 C - 13 A vs. G 0.358 (G) 0.092 (A) >1 (-) 27 (-) >0.05
rs965097 chr1:53525266 PODN [-2588bp] C - 13 A vs. C 0.067 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs17107710 chr1:53502973 SCP2 C - 13 T vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs60885959 chr1:53519530 SCP2 [+2155bp] C - 13 A vs. G 0.025 (A) 0.067 (A) >1 (-) 0 (-) >0.05
rs7544876 chr1:53485391 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs60961888 chr1:53557976 SLC1A7 C - 13 T vs. C 0.033 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs17107989 chr1:53573364 SLC1A7 C - 10 T vs. C - - >1 (-) 6 (-) >0.05
rs80232635 chr1:53502301 SCP2 C - 13 A vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs7526661 chr1:53486885 SCP2 C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs72901391 chr1:53486613 SCP2 C - 13 A vs. G 0.067 (A) 0.375 (A) >1 (-) 0 (-) >0.05
rs74084148 chr1:53556625 SLC1A7 C - 13 T vs. C - 0.033 (T) <1 (-) 0 (-) >0.05
rs150779185 chr1:53495634 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs17107666 chr1:53496675 SCP2 C - 13 A vs. C 0.067 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs142151341 chr1:53495624 SCP2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7540852 chr1:53487047 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs6673572 chr1:53499893 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs6698224 chr1:53492965 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs7543151 chr1:53510038 SCP2 C - 13 A vs. G - 0.092 (A) >1 (-) 18 (-) >0.05
rs6588451 chr1:53492366 SCP2 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs6675908 chr1:53488202 SCP2 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs72903121 chr1:53490989 SCP2 C - 13 A vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs72903122 chr1:53491013 SCP2 C - 13 C vs. G 0.067 (C) 0.367 (C) >1 (-) 0 (-) >0.05
rs72903123 chr1:53491183 SCP2 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs17107630 chr1:53489759 SCP2 C - 13 A vs. T 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs60411922 chr1:53489815 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs72903118 chr1:53490705 SCP2 C - 13 A vs. G 0.067 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs17107639 chr1:53493540 SCP2 C - 13 T vs. C 0.067 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs17107643 chr1:53493822 SCP2 C - 13 T vs. G 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs6588450 chr1:53488402 SCP2 C - 13 C vs. G 0.067 (C) 0.367 (C) >1 (-) 0 (-) >0.05
rs6678556 chr1:53488291 SCP2 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs72903120 chr1:53490763 SCP2 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs7535959 chr1:53489534 SCP2 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs17107624 chr1:53489668 SCP2 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs72903134 chr1:53493072 SCP2 C - 13 C vs. G 0.067 (C) 0.367 (C) >1 (-) 0 (-) >0.05
rs72903137 chr1:53493246 SCP2 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs79969290 chr1:53493426 SCP2 C - 13 C vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs112024481 chr1:53493267 SCP2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs80162538 chr1:53490887 SCP2 C - 13 C vs. G 0.033 (C) 0.267 (C) >1 (-) 0 (-) >0.05
rs17107633 chr1:53490221 SCP2 C - 13 T vs. C 0.067 (C) 0.35 (C) <1 (-) 0 (-) >0.05
rs57871697 chr1:53490399 SCP2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs72903115 chr1:53490614 SCP2 C - 13 T vs. C 0.067 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs77514340 chr1:53490345 SCP2 C - 13 T vs. C 0.067 (T) 0.35 (T) >1 (-) 0 (-) >0.05
rs17107662 chr1:53495529 SCP2 C - 13 T vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs58283791 chr1:53489983 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs58651631 chr1:53489949 SCP2 C - 13 A vs. C 0.067 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs17107656 chr1:53494927 SCP2 C - 13 C vs. G 0.067 (C) 0.367 (C) >1 (-) 0 (-) >0.05
rs60492542 chr1:53494599 SCP2 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs74224013 chr1:53570972 SLC1A7 C - 13 A vs. C 0.033 (C) 0.167 (C) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.