PODN, chr1:53527854-53551174 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34107528 chr1:53537396 PODN C - 13 A vs. G 0.033 (A) - >1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17107617 chr1:53489498 SCP2 C - 13 C vs. G 0.033 (G) 0.283 (G) <1 (-) 0 (-) >0.05
rs11582599 chr1:53586225 SLC1A7 C - 9 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs79566296 chr1:53478189 SCP2 C - 13 C vs. G 0.033 (C) 0.267 (C) >1 (-) 0 (-) >0.05
rs76900154 chr1:53489320 SCP2 C - 13 T vs. C 0.033 (T) 0.283 (T) >1 (-) 0 (-) >0.05
rs12094460 chr1:53506855 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs17107864 chr1:53544807 PODN C - 13 T vs. C 0.033 (T) 0.233 (T) >1 (-) 0 (-) >0.05
rs17107572 chr1:53482078 SCP2 C - 13 A vs. G - 0.267 (A) >1 (-) 0 (-) >0.05
rs28476576 chr1:53505596 SCP2 C - 13 A vs. G 0.092 (G) 0.4 (G) <1 (-) 0 (-) >0.05
rs151319960 chr1:53573715 SLC1A7 C - 10 A vs. C - - >1 (-) 6 (-) >0.05
rs80145801 chr1:53485330 SCP2 C - 13 T vs. C 0.017 (T) 0.283 (T) >1 (-) 0 (-) >0.05
rs7529265 chr1:53480745 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs74085595 chr1:53573809 SLC1A7 C - 10 A vs. C - - <1 (-) 6 (-) >0.05
rs7555162 chr1:53489244 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs7549603 chr1:53489296 SCP2 C - 13 T vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs6684285 chr1:53486262 SCP2 C - 13 T vs. C 0.067 (C) 0.383 (C) <1 (-) 0 (-) >0.05
rs61314084 chr1:53499512 SCP2 C - 13 T vs. C 0.092 (C) 0.383 (C) <1 (-) 0 (-) >0.05
rs61355531 chr1:53505072 SCP2 C - 13 A vs. T 0.025 (T) 0.267 (T) <1 (-) 0 (-) >0.05
rs4638058 chr1:53497686 SCP2 C - 13 T vs. C 0.092 (C) 0.4 (C) <1 (-) 0 (-) >0.05
rs10437066 chr1:53495130 SCP2 C - 13 A vs. G 0.092 (A) 0.4 (A) >1 (-) 0 (-) >0.05
rs75470315 chr1:53487808 SCP2 C - 13 T vs. C 0.025 (T) 0.283 (T) >1 (-) 0 (-) >0.05
rs6684182 chr1:53486314 SCP2 C - 13 A vs. G 0.067 (G) 0.375 (G) <1 (-) 0 (-) >0.05
rs80069702 chr1:53513022 SCP2 C - 13 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs17107690 chr1:53501451 SCP2 C - 13 A vs. C 0.033 (C) 0.067 (C) <1 (-) 17 (-) >0.05
rs17107697 chr1:53501472 SCP2 C - 13 A vs. G 0.033 (A) 0.083 (A) >1 (-) 17 (-) >0.05
rs77509776 chr1:53488641 SCP2 C - 13 A vs. C 0.033 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs17107720 chr1:53506670 SCP2 C - 13 A vs. C 0.033 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs76990261 chr1:53556695 SLC1A7 C - 13 A vs. C 0.033 (C) - <1 (-) 0 (-) >0.05
rs4244640 chr1:53494441 SCP2 C - 13 A vs. G 0.092 (G) 0.4 (G) <1 (-) 0 (-) >0.05
rs56943571 chr1:53505568 SCP2 C - 13 A vs. G 0.033 (A) 0.283 (A) >1 (-) 0 (-) >0.05
rs4926586 chr1:53576030 SLC1A7 C - 12 A vs. C 0.275 (A) - >1 (-) 17 (-) >0.05
rs12075895 chr1:53497421 SCP2 C - 13 A vs. G 0.033 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs17107654 chr1:53494879 SCP2 C - 13 C vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs150311619 chr1:53496507 SCP2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs6684171 chr1:53486094 SCP2 C - 13 T vs. C 0.092 (C) 0.4 (C) <1 (-) 0 (-) >0.05
rs74344194 chr1:53500244 SCP2 C - 13 A vs. G 0.033 (G) 0.292 (G) <1 (-) 0 (-) >0.05
rs59798079 chr1:53519508 SCP2 [+2133bp] C - 13 T vs. C 0.058 (T) 0.108 (T) >1 (-) 5 (-) >0.05
rs17107638 chr1:53491502 SCP2 C - 13 T vs. C 0.033 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs1679938 chr1:53574076 SLC1A7 C - 13 A vs. G 0.283 (G) 0.258 (A) <1 (-) 0 (-) >0.05
rs114618621 chr1:53556122 SLC1A7 C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs6588449 chr1:53488234 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs4442320 chr1:53494091 SCP2 C - 13 A vs. C 0.092 (A) 0.4 (A) >1 (-) 0 (-) >0.05
rs6588453 chr1:53492434 SCP2 C - 13 A vs. T 0.058 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs6588452 chr1:53492412 SCP2 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs75674851 chr1:53510237 SCP2 C - 13 A vs. G 0.033 (A) 0.283 (A) >1 (-) 0 (-) >0.05
rs78624382 chr1:53547188 PODN C - 13 T vs. G 0.033 (T) 0.233 (T) >1 (-) 0 (-) >0.05
rs17107652 chr1:53494825 SCP2 C - 13 A vs. G 0.033 (G) 0.283 (G) <1 (-) 0 (-) >0.05
rs72903149 chr1:53494738 SCP2 C - 13 C vs. G - 0.067 (C) >1 (-) 18 (-) >0.05
rs6588459 chr1:53511094 SCP2 C - 12 T vs. C 0.058 (T) 0.117 (T) >1 (-) 3 (-) >0.05
rs6588458 chr1:53510975 SCP2 C - 13 A vs. G 0.092 (A) 0.392 (A) >1 (-) 0 (-) >0.05
rs6421491 chr1:53511321 SCP2 C - 13 A vs. G 0.058 (G) 0.1 (G) <1 (-) 7 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.