PRDM2, chr1:14026693-14151574 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2235512 chr1:14147514 PRDM2 All: C 108,990 15 C vs. T 0.267 (C) 0.417 (C) 0.92 (0.89-0.96) 0 (0-38) 1.97e-05
Meta_image?name=rs2235512

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs61775102 chr1:14041456 PRDM2 C - 11 A vs. G 0.083 (G) - >1 (-) 0 (-) >0.05
rs11803035 chr1:14127020 PRDM2 C - 13 A vs. G 0.117 (A) 0.15 (A) >1 (-) 0 (-) >0.05
rs78623804 chr1:14004003 PRDM2 [-22690bp] C - 13 T vs. C - - >1 (-) 3 (-) >0.05
rs149459157 chr1:14004004 PRDM2 [-22689bp] C - 13 A vs. G - - <1 (-) 3 (-) >0.05
rs115231513 chr1:14083712 PRDM2 C - 13 A vs. T 0.008 (T) - >1 (-) 0 (-) >0.05
rs140621879 chr1:13984661 RNA5SP41 [+34882bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs6696356 chr1:14165824 PRDM2 [+14250bp] C - 13 A vs. G 0.333 (A) 0.417 (G) >1 (-) 0 (-) >0.05
rs115495351 chr1:14016819 PRDM2 [-9874bp] C - 13 T vs. G 0.017 (T) - <1 (-) 0 (-) >0.05
rs141201322 chr1:14051944 PRDM2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs1203683 chr1:14164286 PRDM2 [+12712bp] C - 13 A vs. C 0.325 (C) 0.417 (A) <1 (-) 0 (-) >0.05
rs151233269 chr1:14146747 PRDM2 C - 9 C vs. G - - <1 (-) 0 (-) >0.05
rs12753492 chr1:14201546 PRDM2 [+49972bp] C - 9 A vs. C 0.192 (A) 0.142 (A) >1 (-) 42 (-) >0.05
rs142362769 chr1:14155426 PRDM2 [+3852bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs79105662 chr1:14085094 PRDM2 C - 13 T vs. C 0.108 (C) 0.158 (C) <1 (-) 0 (-) >0.05
rs12759188 chr1:14195523 PRDM2 [+43949bp] C - 9 C vs. G 0.192 (G) 0.133 (G) <1 (-) 37 (-) >0.05
rs7528584 chr1:14172179 PRDM2 [+20605bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs78241391 chr1:14195512 PRDM2 [+43938bp] C - 9 T vs. C 0.192 (T) 0.133 (T) >1 (-) 37 (-) >0.05
rs116357395 chr1:14019058 PRDM2 [-7635bp] C - 13 A vs. G 0.017 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs1406417 chr1:14092865 PRDM2 C - 13 A vs. C 0.108 (C) 0.15 (C) <1 (-) 0 (-) >0.05
rs80234406 chr1:14044656 PRDM2 C - 13 A vs. T 0.108 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs7522689 chr1:14080748 PRDM2 C - 13 A vs. G 0.108 (A) 0.15 (A) >1 (-) 0 (-) >0.05
rs116252893 chr1:14070934 PRDM2 C - 13 A vs. C 0.008 (A) - <1 (-) 0 (-) >0.05
rs114029487 chr1:14104496 PRDM2 C - 13 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs2495065 chr1:13982728 RNA5SP41 [+32949bp] C - 13 A vs. G 0.008 (G) - >1 (-) 13 (-) >0.05
rs76112447 chr1:14009354 PRDM2 [-17339bp] C - 12 T vs. C 0.017 (T) - <1 (-) 9 (-) >0.05
rs114858490 chr1:14020044 PRDM2 [-6649bp] C - 13 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs4081324 chr1:14020270 PRDM2 [-6423bp] C - 13 T vs. C 0.017 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs2495066 chr1:13982716 RNA5SP41 [+32937bp] C - 13 T vs. C 0.008 (T) - <1 (-) 13 (-) >0.05
rs148848913 chr1:14099574 PRDM2 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs138185459 chr1:14147489 PRDM2 C - 9 A vs. C - - >1 (-) 13 (-) >0.05
rs115326724 chr1:14022276 PRDM2 [-4417bp] C - 13 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs139449949 chr1:13981283 RNA5SP41 [+31504bp] C - 13 T vs. C - - >1 (-) 13 (-) >0.05
rs149952398 chr1:13998278 PRDM2 [-28415bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs114005658 chr1:14044716 PRDM2 C - 12 T vs. G 0.017 (T) - <1 (-) 0 (-) >0.05
rs2487655 chr1:14014663 PRDM2 [-12030bp] C - 10 A vs. C - - >1 (-) 0 (-) >0.05
rs115395001 chr1:14022510 PRDM2 [-4183bp] C - 13 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs116760457 chr1:14023025 PRDM2 [-3668bp] C - 13 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs78178714 chr1:14023535 PRDM2 [-3158bp] C - 13 A vs. G - 0.025 (A) <1 (-) 0 (-) >0.05
rs2495037 chr1:13992846 PRDM2 [-33847bp] C - 13 A vs. G 0.1 (G) 0.283 (G) <1 (-) 0 (-) >0.05
rs113143745 chr1:14056606 PRDM2 C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs149679472 chr1:14149078 PRDM2 C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs79096732 chr1:14025007 PRDM2 [-1686bp] C - 13 T vs. C 0.017 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs3806424 chr1:14030598 PRDM2 C - 13 T vs. C 0.025 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs61775153 chr1:14165381 PRDM2 [+13807bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs147717566 chr1:14032836 PRDM2 C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs68184904 chr1:14165191 PRDM2 [+13617bp] C - 13 C vs. G 0.175 (G) 0.183 (G) >1 (-) 3 (-) >0.05
rs116622727 chr1:14035246 PRDM2 C - 13 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs141008778 chr1:14035290 PRDM2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs115184186 chr1:14036882 PRDM2 C - 13 T vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs144094531 chr1:14036824 PRDM2 C - 13 C vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]