PRDM2, chr1:14026693-14151574 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2235512 chr1:14147514 PRDM2 All: C 108,990 15 C vs. T 0.267 (C) 0.417 (C) 0.92 (0.89-0.96) 0 (0-38) 1.97e-05
Meta_image?name=rs2235512

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2495013 chr1:14074568 PRDM2 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2463872 chr1:14081139 PRDM2 C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs1852775 chr1:14174127 PRDM2 [+22553bp] C - 9 T vs. G - - >1 (-) 47 (-) >0.05
rs112032437 chr1:14002009 PRDM2 [-24684bp] C - 13 A vs. G 0.025 (A) - <1 (-) 11 (-) >0.05
rs2463867 chr1:14062394 PRDM2 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs7518274 chr1:14141371 PRDM2 C - 13 T vs. C 0.1 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs2495082 chr1:14157986 PRDM2 [+6412bp] C - 13 A vs. G 0.192 (A) 0.125 (A) >1 (-) 3 (-) >0.05
rs2495079 chr1:14141604 PRDM2 C - 13 A vs. G 0.075 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs76051382 chr1:13987252 RNA5SP41 [+37473bp] C - 3 T vs. C - - <1 (-) 3 (-) >0.05
rs2495091 chr1:14058201 PRDM2 C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs74056414 chr1:13986367 RNA5SP41 [+36588bp] C - 3 A vs. T - - <1 (-) 1 (-) >0.05
rs2473229 chr1:14055068 PRDM2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs2473230 chr1:14047734 PRDM2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs2495050 chr1:14050564 PRDM2 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2281164 chr1:14130628 PRDM2 C - 13 A vs. G 0.275 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs4661441 chr1:14044110 PRDM2 C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs4344326 chr1:14043609 PRDM2 C - 12 A vs. G 0.0 (G) 0.0 (G) >1 (-) 0 (-) >0.05
rs4661436 chr1:13995379 PRDM2 [-31314bp] C - 13 C vs. G 0.083 (C) - >1 (-) 0 (-) >0.05
rs2495054 chr1:14039816 PRDM2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs2495058 chr1:14034908 PRDM2 C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs2487623 chr1:14032919 PRDM2 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs2495060 chr1:14032007 PRDM2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs116188429 chr1:14022304 PRDM2 [-4389bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs2487626 chr1:14029158 PRDM2 C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs7551586 chr1:14140733 PRDM2 C - 13 A vs. G 0.1 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs78150090 chr1:14139718 PRDM2 C - 4 T vs. C - 0.058 (T) <1 (-) 0 (-) >0.05
rs56057569 chr1:14105922 PRDM2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs145526285 chr1:14025225 PRDM2 [-1468bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs41269803 chr1:14105291 PRDM2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs2487653 chr1:14010534 PRDM2 [-16159bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs114157993 chr1:14102908 PRDM2 C - 8 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs80104731 chr1:14000782 PRDM2 [-25911bp] C - 13 T vs. C 0.008 (T) 0.025 (T) <1 (-) 5 (-) >0.05
rs4480350 chr1:14000765 PRDM2 [-25928bp] C - 13 C vs. G 0.017 (C) 0.025 (C) <1 (-) 5 (-) >0.05
rs4421585 chr1:14000722 PRDM2 [-25971bp] C - 13 T vs. C 0.017 (C) 0.025 (C) >1 (-) 5 (-) >0.05
rs78565867 chr1:14001635 PRDM2 [-25058bp] C - 13 T vs. C - 0.025 (T) <1 (-) 5 (-) >0.05
rs141590326 chr1:13999256 PRDM2 [-27437bp] C - 13 A vs. G - - <1 (-) 5 (-) >0.05
rs113235120 chr1:13999614 PRDM2 [-27079bp] C - 13 A vs. G - - >1 (-) 5 (-) >0.05
rs143266882 chr1:14000071 PRDM2 [-26622bp] C - 13 T vs. C - - >1 (-) 5 (-) >0.05
rs2495090 chr1:14155055 PRDM2 [+3481bp] C - 13 T vs. C 0.217 (T) 0.333 (T) >1 (-) 7 (-) >0.05
rs77349561 chr1:14001835 PRDM2 [-24858bp] C - 13 T vs. G 0.017 (G) - >1 (-) 5 (-) >0.05
rs111871728 chr1:13999619 PRDM2 [-27074bp] C - 13 T vs. C - - >1 (-) 5 (-) >0.05
rs77005299 chr1:13999364 PRDM2 [-27329bp] C - 13 A vs. G 0.025 (G) - >1 (-) 5 (-) >0.05
rs2495014 chr1:13985591 RNA5SP41 [+35812bp] C - 13 A vs. C 0.025 (A) - >1 (-) 0 (-) >0.05
rs116406995 chr1:13998802 PRDM2 [-27891bp] C - 13 T vs. C 0.017 (C) - >1 (-) 3 (-) >0.05
rs145026374 chr1:13998735 PRDM2 [-27958bp] C - 13 A vs. C - - >1 (-) 3 (-) >0.05
rs71629848 chr1:14173424 PRDM2 [+21850bp] C - 9 A vs. G 0.183 (G) 0.217 (G) <1 (-) 45 (-) >0.05
rs1203689 chr1:14162680 PRDM2 [+11106bp] C - 13 A vs. T 0.175 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs71629847 chr1:14173337 PRDM2 [+21763bp] C - 9 A vs. T 0.192 (A) 0.217 (A) >1 (-) 45 (-) >0.05
rs113475021 chr1:14002412 PRDM2 [-24281bp] C - 13 T vs. C 0.017 (T) 0.025 (T) <1 (-) 3 (-) >0.05
rs140531764 chr1:14165174 PRDM2 [+13600bp] C - 9 T vs. C - - <1 (-) 47 (-) >0.05

Association studies for this region [+]