PRDM2, chr1:14026693-14151574 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2235512 chr1:14147514 PRDM2 All: C 108,990 15 C vs. T 0.267 (C) 0.417 (C) 0.92 (0.89-0.96) 0 (0-38) 1.97e-05
Meta_image?name=rs2235512

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2486182 chr1:13989227 PRDM2 [-37466bp] C - 13 T vs. C 0.1 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs116606690 chr1:14002571 PRDM2 [-24122bp] C - 13 T vs. C 0.017 (C) - >1 (-) 3 (-) >0.05
rs148169628 chr1:14002643 PRDM2 [-24050bp] C - 13 T vs. C - - <1 (-) 3 (-) >0.05
rs34088922 chr1:14177679 PRDM2 [+26105bp] C - 9 T vs. C 0.2 (T) 0.217 (T) >1 (-) 46 (-) >0.05
rs12063859 chr1:14173042 PRDM2 [+21468bp] C - 9 T vs. C 0.192 (C) 0.217 (C) <1 (-) 49 (-) >0.05
rs112170681 chr1:14003344 PRDM2 [-23349bp] C - 13 T vs. C 0.017 (C) - >1 (-) 3 (-) >0.05
rs112331292 chr1:14003485 PRDM2 [-23208bp] C - 13 A vs. G 0.008 (A) 0.033 (A) <1 (-) 3 (-) >0.05
rs10141303 chr1:14168428 PRDM2 [+16854bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs111277821 chr1:14003646 PRDM2 [-23047bp] C - 13 C vs. G 0.008 (G) - >1 (-) 3 (-) >0.05
rs74569552 chr1:14003770 PRDM2 [-22923bp] C - 13 T vs. C 0.017 (C) - >1 (-) 3 (-) >0.05
rs78557472 chr1:14098707 PRDM2 C - 13 T vs. C 0.108 (T) 0.15 (T) >1 (-) 0 (-) >0.05
rs2281167 chr1:14128113 PRDM2 C - 10 A vs. G 0.008 (A) 0.258 (A) <1 (-) 0 (-) >0.05
rs75185315 chr1:14174658 PRDM2 [+23084bp] C - 9 A vs. T 0.192 (A) 0.217 (A) >1 (-) 45 (-) >0.05
rs77229905 chr1:14097480 PRDM2 C - 13 A vs. G 0.108 (A) 0.15 (A) >1 (-) 0 (-) >0.05
rs12754389 chr1:13984226 RNA5SP41 [+34447bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs11803252 chr1:13984208 RNA5SP41 [+34429bp] C - 13 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs2487633 chr1:13979477 RNA5SP41 [+29698bp] C - 13 A vs. G 0.092 (G) 0.075 (G) <1 (-) 0 (-) >0.05
rs72637677 chr1:14153148 PRDM2 [+1574bp] C - 12 T vs. C 0.05 (C) - <1 (-) 1 (-) >0.05
rs2487631 chr1:13977327 RNA5SP41 [+27548bp] C - 13 T vs. G 0.1 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs111559874 chr1:14003858 PRDM2 [-22835bp] C - 13 A vs. G 0.008 (G) - >1 (-) 2 (-) >0.05
rs2495043 chr1:13996574 PRDM2 [-30119bp] C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs78823979 chr1:14004054 PRDM2 [-22639bp] C - 13 A vs. G 0.017 (G) - >1 (-) 2 (-) >0.05
rs116077027 chr1:14004401 PRDM2 [-22292bp] C - 13 T vs. C - - <1 (-) 2 (-) >0.05
rs76069246 chr1:14004191 PRDM2 [-22502bp] C - 13 A vs. C - - <1 (-) 2 (-) >0.05
rs75346192 chr1:14004433 PRDM2 [-22260bp] C - 13 A vs. C 0.017 (C) - >1 (-) 2 (-) >0.05
rs79825134 chr1:14004513 PRDM2 [-22180bp] C - 13 T vs. C 0.008 (C) 0.025 (C) >1 (-) 1 (-) >0.05
rs12754515 chr1:14175779 PRDM2 [+24205bp] C - 9 A vs. G - - <1 (-) 46 (-) >0.05
rs2495024 chr1:13988403 PRDM2 [-38290bp] C - 13 T vs. C 0.1 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs112618706 chr1:14004630 PRDM2 [-22063bp] C - 13 T vs. G - - >1 (-) 1 (-) >0.05
rs2495022 chr1:13988076 RNA5SP41 [+38297bp] C - 13 T vs. C 0.1 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs147830865 chr1:14005032 PRDM2 [-21661bp] C - 13 A vs. T - - >1 (-) 1 (-) >0.05
rs10927938 chr1:14160212 PRDM2 [+8638bp] C - 13 T vs. C 0.192 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs71629849 chr1:14173515 PRDM2 [+21941bp] C - 9 A vs. T 0.183 (T) 0.217 (T) <1 (-) 44 (-) >0.05
rs4140570 chr1:14157624 PRDM2 [+6050bp] C - 13 C vs. G 0.183 (C) 0.225 (C) >1 (-) 7 (-) >0.05
rs2463869 chr1:14158117 PRDM2 [+6543bp] C - 13 T vs. C - - <1 (-) 6 (-) >0.05
rs115968025 chr1:14005294 PRDM2 [-21399bp] C - 13 A vs. G 0.008 (G) 0.025 (G) >1 (-) 1 (-) >0.05
rs12026664 chr1:14169833 PRDM2 [+18259bp] C - 3 A vs. C 0.008 (C) 0.208 (C) >1 (-) 31 (-) >0.05
rs2463870 chr1:14158282 PRDM2 [+6708bp] C - 13 T vs. C - - >1 (-) 6 (-) >0.05
rs34552281 chr1:14175653 PRDM2 [+24079bp] C - 9 A vs. G 0.175 (G) 0.217 (G) <1 (-) 46 (-) >0.05
rs113266271 chr1:14005174 PRDM2 [-21519bp] C - 13 A vs. G - 0.025 (A) <1 (-) 1 (-) >0.05
rs34580945 chr1:14178016 PRDM2 [+26442bp] C - 9 A vs. T 0.192 (T) 0.217 (T) <1 (-) 47 (-) >0.05
rs12723907 chr1:14178218 PRDM2 [+26644bp] C - 9 T vs. C 0.175 (T) 0.217 (T) >1 (-) 47 (-) >0.05
rs7514927 chr1:14178516 PRDM2 [+26942bp] C - 9 A vs. G 0.175 (A) 0.217 (A) >1 (-) 47 (-) >0.05
rs7530376 chr1:14158776 PRDM2 [+7202bp] C - 13 A vs. G 0.2 (A) 0.2 (A) >1 (-) 5 (-) >0.05
rs149049086 chr1:14025572 PRDM2 [-1121bp] C - 10 T vs. C - - >1 (-) 33 (-) >0.05
rs113463397 chr1:14017726 PRDM2 [-8967bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs2495029 chr1:13990258 PRDM2 [-36435bp] C - 13 T vs. C 0.1 (C) - <1 (-) 0 (-) >0.05
rs75283449 chr1:14007885 PRDM2 [-18808bp] C - 12 A vs. G 0.008 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs17346826 chr1:14190295 PRDM2 [+38721bp] C - 12 A vs. T 0.067 (T) - <1 (-) 0 (-) >0.05
rs7518106 chr1:14174353 PRDM2 [+22779bp] C - 9 A vs. T 0.175 (A) 0.217 (A) >1 (-) 45 (-) >0.05

Association studies for this region [+]