PROM1, chr4:15964699-16086001 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs78918800 chr4:15952264 FGFBP2 [-9602bp] C - 9 T vs. C 0.017 (T) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs78918800 chr4:15952264 FGFBP2 [-9602bp] C - 9 T vs. C 0.017 (T) - >1 (-) 0 (-) <0.05
rs140678249 chr4:16074216 PROM1 All: C 108,990 15 T vs. G - - 0.89 (0.81-0.97) 0 (-) 0.012
rs74842426 chr4:15964812 FGFBP2 C - 7 T vs. C - - >1 (-) 0 (-) <0.05
rs61625829 chr4:16127817 TAPT1 [-34311bp] C - 13 C vs. G 0.167 (G) 0.033 (G) <1 (-) 31 (-) <0.05
rs115458300 chr4:16094263 PROM1 [+8262bp] C - 12 A vs. G 0.008 (A) - >1 (-) 22 (-) <0.05
rs56664915 chr4:16066953 PROM1 C - 5 A vs. C - 0.067 (C) <1 (-) 0 (-) <0.05
rs62288713 chr4:15977198 PROM1 C - 8 T vs. C 0.008 (C) - >1 (-) 1 (-) <0.05
rs115313780 chr4:16006654 PROM1 C - 13 T vs. C 0.042 (T) - >1 (-) 18 (-) <0.05
rs10939642 chr4:15943140 FGFBP1 [+2777bp] C - 13 A vs. G 0.358 (G) 0.317 (G) >1 (-) 28 (-) <0.05
rs75337066 chr4:16068822 PROM1 C - 13 T vs. C 0.075 (T) - <1 (-) 0 (-) <0.05
rs78798852 chr4:15936071 FGFBP1 [-1121bp] C - 5 T vs. G 0.008 (T) - >1 (-) 0 (-) <0.05
rs2531145 chr4:15927144 FGFBP1 [-10048bp] C - 13 T vs. C 0.217 (C) 0.333 (C) >1 (-) 0 (-) <0.05
rs111354830 chr4:15927009 FGFBP1 [-10183bp] C - 12 C vs. G - - <1 (-) 0 (-) <0.05
rs3796849 chr4:16005699 PROM1 C - 13 T vs. C 0.133 (C) 0.017 (C) <1 (-) 0 (-) <0.05
rs150510789 chr4:16080941 PROM1 C - 3 T vs. C - - >1 (-) 0 (-) <0.05
rs78496712 chr4:16062401 PROM1 C - 13 A vs. G 0.075 (A) - <1 (-) 8 (-) <0.05
rs56413603 chr4:16002317 PROM1 C - 13 T vs. C 0.133 (T) 0.092 (T) >1 (-) 0 (-) <0.05
rs116447403 chr4:16068530 PROM1 All: C 108,990 15 T vs. C 0.008 (T) - 1.10 (1.00-1.21) 0 (-) 0.046
rs17478086 chr4:16001913 PROM1 C - 13 T vs. C 0.133 (C) 0.092 (C) <1 (-) 0 (-) >0.05
rs2531143 chr4:15927497 FGFBP1 [-9695bp] C - 10 A vs. G 0.05 (A) 0.117 (A) <1 (-) 26 (-) >0.05
rs2531144 chr4:15927292 FGFBP1 [-9900bp] C - 13 T vs. C 0.217 (T) 0.333 (T) <1 (-) 0 (-) >0.05
rs7669150 chr4:16085522 PROM1 C - 13 T vs. C 0.075 (C) - >1 (-) 4 (-) >0.05
rs17387100 chr4:15995125 PROM1 C - 13 A vs. G 0.083 (G) - >1 (-) 0 (-) >0.05
rs6816182 chr4:16035996 PROM1 C - 13 T vs. C 0.133 (C) 0.225 (C) >1 (-) 0 (-) >0.05
rs146912355 chr4:16104353 PROM1 [+18352bp] All: C 108,990 15 G vs. A - - 0.90 (0.81-1.01) 0 (0-0) 0.063
rs55866803 chr4:15943485 FGFBP1 [+3122bp] C - 13 A vs. G 0.292 (A) 0.425 (A) <1 (-) 40 (-) >0.05
rs73230286 chr4:15993149 PROM1 C - 13 A vs. C 0.083 (C) - >1 (-) 0 (-) >0.05
rs876320 chr4:15930961 FGFBP1 [-6231bp] C - 13 A vs. G 0.242 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs115392928 chr4:15968713 FGFBP2 C - 12 A vs. G 0.017 (A) - >1 (-) 41 (-) >0.05
rs115832613 chr4:15967933 FGFBP2 C - 12 A vs. G 0.017 (A) - >1 (-) 41 (-) >0.05
rs17478044 chr4:16000334 PROM1 C - 13 T vs. C 0.133 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs11938689 chr4:15994984 PROM1 C - 13 A vs. G 0.133 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs17477995 chr4:15997097 PROM1 C - 13 A vs. G 0.133 (A) 0.092 (A) >1 (-) 0 (-) >0.05
rs6449214 chr4:16032640 PROM1 C - 13 A vs. G - 0.2 (A) <1 (-) 0 (-) >0.05
rs1850507 chr4:16028866 PROM1 C - 13 T vs. G 0.142 (G) 0.392 (G) >1 (-) 0 (-) >0.05
rs73232531 chr4:16094456 PROM1 [+8455bp] C - 13 T vs. G 0.017 (T) - >1 (-) 23 (-) >0.05
rs2531142 chr4:15928176 FGFBP1 [-9016bp] C - 13 A vs. C 0.192 (A) 0.333 (A) <1 (-) 0 (-) >0.05
rs2531138 chr4:15930280 FGFBP1 [-6912bp] C - 13 A vs. G - - <1 (-) 35 (-) >0.05
rs112500330 chr4:16006120 PROM1 C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs73798804 chr4:16007777 PROM1 C - 13 A vs. G 0.142 (G) 0.092 (G) <1 (-) 0 (-) >0.05
rs11941087 chr4:15994193 PROM1 C - 13 T vs. C 0.117 (C) 0.092 (C) <1 (-) 0 (-) >0.05
rs73230220 chr4:15982382 PROM1 C - 13 A vs. G 0.092 (A) - <1 (-) 0 (-) >0.05
rs6812899 chr4:15929668 FGFBP1 [-7524bp] C - 13 C vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs55808189 chr4:15983246 PROM1 C - 13 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs73230225 chr4:15983944 PROM1 C - 13 T vs. C 0.092 (T) - <1 (-) 0 (-) >0.05
rs151127031 chr4:16070750 PROM1 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs10488965 chr4:16009879 PROM1 C - 13 C vs. G 0.142 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs7692760 chr4:16085358 PROM1 C - 13 A vs. G 0.217 (A) 0.275 (A) <1 (-) 0 (-) >0.05
rs2532064 chr4:15932672 FGFBP1 [-4520bp] C - 11 C vs. G 0.042 (G) 0.117 (G) >1 (-) 23 (-) >0.05
rs73798805 chr4:16009562 PROM1 C - 13 A vs. G 0.142 (A) 0.1 (A) >1 (-) 0 (-) >0.05

Association studies for this region [+]