PSMB9, chr6:32811913-32827362 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115493740 chr6:32838539 PSMB9 [+11177bp] All: C 103,235 14 A vs. G 0.092 (A) - 0.87 (0.82-0.92) 0 (0-41) 8.65e-06
Meta_image?name=rs115493740

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs41316548 chr6:32797167 TAP2 C - 12 T vs. C 0.042 (T) 0.017 (T) <1 (-) 15 (-) >0.05
rs3819716 chr6:32804284 TAP2 C - 12 A vs. G 0.417 (G) 0.458 (A) <1 (-) 0 (-) >0.05
rs241430 chr6:32802820 TAP2 C - 12 T vs. C 0.408 (T) 0.333 (T) >1 (-) 0 (-) >0.05
rs117989917 chr6:32870271 HLA-DMB [-32135bp] C - 10 A vs. G - 0.1 (A) <1 (-) 0 (-) >0.05
rs16870917 chr6:32792092 TAP2 C - 12 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs117748428 chr6:32841457 PSMB9 [+14095bp] C - 10 A vs. G - 0.117 (G) >1 (-) 0 (-) >0.05
rs140872430 chr6:32842069 PSMB9 [+14707bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs2071535 chr6:32824187 PSMB9 C - 9 A vs. G - 0.117 (A) <1 (-) 0 (-) >0.05
rs34975158 chr6:32853511 PSMB9 [+26149bp] C - 12 A vs. G 0.067 (A) - <1 (-) 13 (-) >0.05
rs58075577 chr6:32791929 TAP2 C - 12 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs74486463 chr6:32873207 HLA-DMB [-29199bp] C - 12 A vs. T 0.058 (T) 0.05 (T) <1 (-) 3 (-) >0.05
rs2621378 chr6:32763040 HLA-DOB [-17500bp] C - 11 A vs. G 0.408 (G) 0.25 (G) >1 (-) 15 (-) >0.05
rs9276902 chr6:32848941 PSMB9 [+21579bp] C - 12 A vs. C 0.05 (C) - >1 (-) 33 (-) >0.05
rs139729172 chr6:32862402 PSMB9 [+35040bp] C - 9 A vs. C - - >1 (-) 25 (-) >0.05
rs78042421 chr6:32786516 HLA-DOB [+1691bp] C - 12 T vs. C 0.033 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs12526988 chr6:32849700 PSMB9 [+22338bp] C - 10 T vs. C - 0.108 (T) <1 (-) 0 (-) >0.05
rs2071481 chr6:32819865 PSMB9 C - 12 T vs. C 0.075 (C) 0.175 (C) <1 (-) 0 (-) >0.05
rs78866240 chr6:32871025 HLA-DMB [-31381bp] C - 12 C vs. G 0.058 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs80040212 chr6:32870783 HLA-DMB [-31623bp] C - 12 A vs. G 0.058 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs9500926 chr6:32876514 HLA-DMB [-25892bp] C - 12 T vs. C 0.05 (C) 0.058 (C) <1 (-) 3 (-) >0.05
rs117871380 chr6:32841253 PSMB9 [+13891bp] C - 10 T vs. C - 0.108 (T) <1 (-) 0 (-) >0.05
rs56173814 chr6:32797974 TAP2 C - 9 T vs. C 0.008 (T) - <1 (-) 18 (-) >0.05
rs79046827 chr6:32873547 HLA-DMB [-28859bp] C - 12 A vs. C 0.058 (A) - >1 (-) 0 (-) >0.05
rs141274380 chr6:32776136 HLA-DOB [-4404bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs9296057 chr6:32869915 HLA-DMB [-32491bp] C - 12 A vs. G 0.058 (G) 0.058 (G) <1 (-) 1 (-) >0.05
rs9469301 chr6:32869708 HLA-DMB [-32698bp] C - 12 T vs. C - - >1 (-) 1 (-) >0.05
rs75910838 chr6:32868607 HLA-DMB [-33799bp] C - 12 A vs. C 0.058 (A) - >1 (-) 0 (-) >0.05
rs1135216 chr6:32814975 PSMB9 C - 12 T vs. C 0.1 (C) 0.175 (C) <1 (-) 0 (-) >0.05
rs1591 chr6:32871317 HLA-DMB [-31089bp] C - 12 A vs. C 0.058 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs4959118 chr6:32845672 PSMB9 [+18310bp] C - 10 T vs. G - 0.092 (T) <1 (-) 0 (-) >0.05
rs9469310 chr6:32874796 HLA-DMB [-27610bp] C - 12 A vs. G 0.058 (G) 0.067 (G) <1 (-) 0 (-) >0.05
rs79012731 chr6:32872116 HLA-DMB [-30290bp] C - 12 T vs. C 0.033 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs9461818 chr6:32867859 HLA-DMB [-34547bp] C - 12 A vs. G 0.058 (G) 0.05 (G) <1 (-) 1 (-) >0.05
rs77601892 chr6:32868300 HLA-DMB [-34106bp] C - 12 T vs. C 0.058 (C) 0.058 (C) <1 (-) 1 (-) >0.05
rs9500924 chr6:32868985 HLA-DMB [-33421bp] C - 12 A vs. G 0.058 (G) 0.058 (G) <1 (-) 1 (-) >0.05
rs2227020 chr6:32770133 HLA-DOB [-10407bp] C - 12 T vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs112280802 chr6:32866427 HLA-DMB [-35979bp] C - 12 T vs. C 0.058 (C) 0.058 (C) <1 (-) 7 (-) >0.05
rs111383877 chr6:32866964 HLA-DMB [-35442bp] C - 12 A vs. C 0.067 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs9501233 chr6:32867123 HLA-DMB [-35283bp] C - 12 A vs. G 0.058 (A) 0.092 (A) >1 (-) 0 (-) >0.05
rs7744666 chr6:32859712 PSMB9 [+32350bp] C - 12 T vs. C 0.067 (C) - <1 (-) 0 (-) >0.05
rs16870918 chr6:32792162 TAP2 C - 12 T vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs9296058 chr6:32874413 HLA-DMB [-27993bp] C - 12 T vs. C 0.05 (C) 0.067 (C) <1 (-) 9 (-) >0.05
rs80108580 chr6:32763128 HLA-DOB [-17412bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs9986640 chr6:32764970 HLA-DOB [-15570bp] C - 8 A vs. G - 0.017 (A) >1 (-) 0 (-) >0.05
rs9296045 chr6:32766405 HLA-DOB [-14135bp] C - 8 A vs. G - 0.017 (A) >1 (-) 0 (-) >0.05
rs241426 chr6:32804553 TAP2 C - 12 A vs. T 0.375 (T) 0.425 (T) <1 (-) 0 (-) >0.05
rs79197014 chr6:32866520 HLA-DMB [-35886bp] C - 12 T vs. C 0.058 (T) 0.058 (T) >1 (-) 2 (-) >0.05
rs17213980 chr6:32864383 PSMB9 [+37021bp] C - 12 A vs. G 0.058 (G) 0.058 (G) <1 (-) 0 (-) >0.05
rs59145501 chr6:32791831 TAP2 C - 12 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs11963774 chr6:32864467 PSMB9 [+37105bp] C - 12 A vs. G 0.058 (G) 0.058 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]