PSMB9, chr6:32811913-32827362 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115493740 chr6:32838539 PSMB9 [+11177bp] All: C 103,235 14 A vs. G 0.092 (A) - 0.87 (0.82-0.92) 0 (0-41) 8.65e-06
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs241425 chr6:32804909 TAP2 C - 12 A vs. G 0.45 (A) 0.392 (A) >1 (-) 15 (-) >0.05
rs9784758 chr6:32788511 TAP2 [-1099bp] C - 11 T vs. C 0.075 (C) 0.117 (C) >1 (-) 0 (-) >0.05
rs2857148 chr6:32768314 HLA-DOB [-12226bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs142671473 chr6:32865852 HLA-DMB [-36554bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs241438 chr6:32797620 TAP2 C - 12 T vs. C 0.375 (T) 0.492 (C) >1 (-) 22 (-) >0.05
rs10364 chr6:32780572 HLA-DOB C - 12 T vs. C 0.092 (C) 0.175 (C) <1 (-) 41 (-) >0.05
rs2857149 chr6:32768312 HLA-DOB [-12228bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs111980964 chr6:32841370 PSMB9 [+14008bp] C - 12 T vs. C 0.042 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs2621369 chr6:32768285 HLA-DOB [-12255bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2061952 chr6:32785714 HLA-DOB [+889bp] C - 12 T vs. C 0.233 (C) 0.292 (C) <1 (-) 0 (-) >0.05
rs2071475 chr6:32782387 HLA-DOB C - 12 A vs. G 0.233 (A) 0.292 (A) >1 (-) 0 (-) >0.05
rs2239701 chr6:32805049 TAP2 C - 12 T vs. C 0.433 (C) 0.433 (C) >1 (-) 47 (-) >0.05
rs146461602 chr6:32874542 HLA-DMB [-27864bp] C - 9 C vs. G - - >1 (-) 0 (-) >0.05
rs3101942 chr6:32870057 HLA-DMB [-32349bp] C - 11 A vs. G 0.442 (G) 0.475 (A) <1 (-) 1 (-) >0.05
rs9276807 chr6:32780156 HLA-DOB [-384bp] C - 12 A vs. G 0.267 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs2621318 chr6:32796455 TAP2 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs9276831 chr6:32832033 PSMB9 [+4671bp] C - 12 A vs. G 0.108 (G) 0.125 (G) <1 (-) 0 (-) >0.05
rs113532053 chr6:32766158 HLA-DOB [-14382bp] C - 12 C vs. G 0.083 (C) - >1 (-) 0 (-) >0.05
rs116456836 chr6:32767983 HLA-DOB [-12557bp] C - 12 A vs. G 0.092 (A) 0.225 (A) >1 (-) 37 (-) >0.05
rs241398 chr6:32875450 HLA-DMB [-26956bp] C - 11 T vs. C 0.417 (T) 0.292 (T) <1 (-) 0 (-) >0.05
rs10214513 chr6:32857703 PSMB9 [+30341bp] C - 12 A vs. C 0.075 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs2621423 chr6:32848820 PSMB9 [+21458bp] C - 3 T vs. C - 0.042 (C) <1 (-) 0 (-) >0.05
rs4947353 chr6:32777678 HLA-DOB [-2862bp] C - 12 A vs. G 0.092 (A) 0.192 (A) >1 (-) 36 (-) >0.05
rs1871664 chr6:32804881 TAP2 C - 12 A vs. G 0.45 (G) 0.408 (G) <1 (-) 2 (-) >0.05
rs1871665 chr6:32804879 TAP2 C - 12 T vs. C 0.45 (C) 0.408 (C) <1 (-) 1 (-) >0.05
rs10214886 chr6:32857419 PSMB9 [+30057bp] C - 11 A vs. T 0.075 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs241424 chr6:32804934 TAP2 C - 12 A vs. G 0.45 (A) 0.483 (A) <1 (-) 0 (-) >0.05
rs2244458 chr6:32853504 PSMB9 [+26142bp] C - 12 T vs. C - - >1 (-) 17 (-) >0.05
rs1585894 chr6:32875323 HLA-DMB [-27083bp] C - 12 T vs. G 0.058 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs61318116 chr6:32770493 HLA-DOB [-10047bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs117073325 chr6:32828669 PSMB9 [+1307bp] C - 9 A vs. C - 0.075 (A) <1 (-) 25 (-) >0.05
rs241437 chr6:32797684 TAP2 C - 12 A vs. G 0.417 (G) 0.475 (A) <1 (-) 14 (-) >0.05
rs11756846 chr6:32812580 PSMB9 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs2859579 chr6:32784073 HLA-DOB C - 12 T vs. G 0.317 (T) 0.375 (T) >1 (-) 0 (-) >0.05
rs2621340 chr6:32775480 HLA-DOB [-5060bp] C - 12 T vs. C 0.342 (C) 0.367 (C) <1 (-) 4 (-) >0.05
rs241436 chr6:32797876 TAP2 C - 12 A vs. G 0.442 (G) 0.425 (A) <1 (-) 32 (-) >0.05
rs2071474 chr6:32782582 HLA-DOB C - 12 T vs. C 0.325 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs2071470 chr6:32784753 HLA-DOB C - 12 T vs. C 0.325 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs113045309 chr6:32842230 PSMB9 [+14868bp] C - 12 T vs. G 0.042 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs28622052 chr6:32857086 PSMB9 [+29724bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs9276785 chr6:32776292 HLA-DOB [-4248bp] C - 12 A vs. G 0.267 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs116352852 chr6:32871729 HLA-DMB [-30677bp] C - 10 A vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs9276826 chr6:32830568 PSMB9 [+3206bp] C - 12 A vs. G 0.142 (G) - <1 (-) 0 (-) >0.05
rs241439 chr6:32797537 TAP2 C - 12 T vs. G 0.417 (G) 0.492 (T) <1 (-) 16 (-) >0.05
rs4947352 chr6:32777335 HLA-DOB [-3205bp] C - 12 A vs. G 0.092 (G) 0.175 (G) <1 (-) 38 (-) >0.05
rs6912414 chr6:32774465 HLA-DOB [-6075bp] C - 12 A vs. G 0.267 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs6899878 chr6:32770530 HLA-DOB [-10010bp] C - 12 A vs. T 0.267 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs7382649 chr6:32776087 HLA-DOB [-4453bp] C - 12 T vs. C 0.267 (T) 0.383 (T) <1 (-) 0 (-) >0.05
rs60825474 chr6:32851079 PSMB9 [+23717bp] C - 10 T vs. C - - <1 (-) 19 (-) >0.05
rs6457678 chr6:32768378 HLA-DOB [-12162bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]