PSMB9, chr6:32811913-32827362 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115493740 chr6:32838539 PSMB9 [+11177bp] All: C 103,235 14 A vs. G 0.092 (A) - 0.87 (0.82-0.92) 0 (0-41) 8.65e-06
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2228106 chr6:32816448 PSMB9 C - 10 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs150909029 chr6:32772903 HLA-DOB [-7637bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs9276733 chr6:32766026 HLA-DOB [-14514bp] C - 12 A vs. G 0.267 (G) 0.358 (G) >1 (-) 0 (-) >0.05
rs9378275 chr6:32803999 TAP2 C - 11 A vs. T 0.008 (T) 0.1 (T) <1 (-) 0 (-) >0.05
rs6912002 chr6:32765268 HLA-DOB [-15272bp] C - 12 T vs. C 0.267 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs6937723 chr6:32766003 HLA-DOB [-14537bp] C - 12 A vs. T 0.267 (T) 0.392 (T) >1 (-) 0 (-) >0.05
rs149824312 chr6:32813731 PSMB9 C - 9 C vs. G - - <1 (-) 65 (-) >0.05
rs2071469 chr6:32784783 HLA-DOB C - 12 T vs. C 0.375 (T) 0.492 (T) >1 (-) 0 (-) >0.05
rs117535069 chr6:32833984 PSMB9 [+6622bp] C - 11 T vs. C - 0.058 (T) <1 (-) 0 (-) >0.05
rs6937875 chr6:32766041 HLA-DOB [-14499bp] C - 12 T vs. C 0.267 (T) 0.392 (T) <1 (-) 0 (-) >0.05
rs9276772 chr6:32774291 HLA-DOB [-6249bp] C - 12 C vs. G 0.092 (G) - >1 (-) 19 (-) >0.05
rs117849398 chr6:32788377 TAP2 [-1233bp] C - 9 A vs. G - 0.067 (A) <1 (-) 0 (-) >0.05
rs11244 chr6:32780724 HLA-DOB C - 12 A vs. G 0.233 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs113625970 chr6:32788095 TAP2 [-1515bp] C - 9 T vs. C - 0.067 (C) >1 (-) 0 (-) >0.05
rs4148878 chr6:32822186 PSMB9 C - 12 T vs. G 0.042 (G) - >1 (-) 25 (-) >0.05
rs2071545 chr6:32796058 TAP2 C - 12 T vs. C 0.3 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs2071546 chr6:32796057 TAP2 C - 12 A vs. G 0.292 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs143486724 chr6:32826568 PSMB9 C - 3 T vs. C - - <1 (-) 12 (-) >0.05
rs3819715 chr6:32804219 TAP2 C - 12 T vs. G 0.292 (T) 0.375 (T) <1 (-) 0 (-) >0.05
rs2157077 chr6:32785904 HLA-DOB [+1079bp] C - 12 T vs. G 0.375 (T) 0.4 (T) >1 (-) 0 (-) >0.05
rs4623282 chr6:32817444 PSMB9 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs9469305 chr6:32872348 HLA-DMB [-30058bp] C - 11 A vs. G 0.058 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs9469302 chr6:32872266 HLA-DMB [-30140bp] C - 11 A vs. G 0.058 (G) 0.058 (G) <1 (-) 0 (-) >0.05
rs3819714 chr6:32804217 TAP2 C - 12 A vs. G 0.292 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs9501234 chr6:32876049 HLA-DMB [-26357bp] C - 11 A vs. G 0.058 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs55857185 chr6:32806084 TAP2 C - 6 C vs. G - - <1 (-) 21 (-) >0.05
rs9500925 chr6:32876416 HLA-DMB [-25990bp] C - 11 A vs. C - 0.075 (C) <1 (-) 0 (-) >0.05
rs55738762 chr6:32795981 TAP2 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs9276731 chr6:32765585 HLA-DOB [-14955bp] C - 12 T vs. G 0.083 (T) - <1 (-) 25 (-) >0.05
rs115225185 chr6:32791391 TAP2 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs2187689 chr6:32852647 PSMB9 [+25285bp] C - 12 T vs. C 0.033 (C) 0.175 (C) <1 (-) 0 (-) >0.05
rs41270492 chr6:32809965 PSMB8 C - 10 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs13208583 chr6:32800871 TAP2 C - 12 T vs. C 0.058 (T) - >1 (-) 0 (-) >0.05
rs12527715 chr6:32816998 PSMB9 C - 12 T vs. C 0.117 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs149508998 chr6:32840488 PSMB9 [+13126bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs78084276 chr6:32778326 HLA-DOB [-2214bp] C - 12 T vs. G 0.033 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs9404998 chr6:32784098 HLA-DOB C - 11 A vs. G 0.017 (A) 0.083 (A) >1 (-) 0 (-) >0.05
rs2621341 chr6:32775213 HLA-DOB [-5327bp] C - 4 C vs. G - 0.008 (C) >1 (-) 0 (-) >0.05
rs6937727 chr6:32766020 HLA-DOB [-14520bp] C - 12 A vs. G 0.267 (G) 0.375 (G) >1 (-) 0 (-) >0.05
rs6938180 chr6:32766014 HLA-DOB [-14526bp] C - 12 A vs. G 0.25 (A) 0.392 (A) <1 (-) 0 (-) >0.05
rs2071541 chr6:32812858 PSMB9 C - 12 A vs. G 0.083 (G) 0.175 (G) <1 (-) 0 (-) >0.05
rs1057141 chr6:32818774 PSMB9 C - 12 T vs. C 0.117 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs2071538 chr6:32818678 PSMB9 C - 12 A vs. G 0.275 (A) 0.408 (A) >1 (-) 41 (-) >0.05
rs6938690 chr6:32831461 PSMB9 [+4099bp] C - 12 T vs. C 0.35 (T) 0.325 (T) >1 (-) 12 (-) >0.05
rs17429444 chr6:32786068 HLA-DOB [+1243bp] C - 12 A vs. G 0.067 (G) 0.067 (G) <1 (-) 52 (-) >0.05
rs16871018 chr6:32813691 PSMB9 C - 8 T vs. C 0.008 (T) - >1 (-) 36 (-) >0.05
rs17213728 chr6:32781954 HLA-DOB C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs75439840 chr6:32836336 PSMB9 [+8974bp] C - 12 C vs. G - - >1 (-) 36 (-) >0.05
rs241431 chr6:32802351 TAP2 C - 12 T vs. C 0.05 (C) - >1 (-) 26 (-) >0.05
rs111594182 chr6:32790718 TAP2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]