PTPRA, chr20:2844830-3019722 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7268763 chr20:2828596 VPS16 All: C 108,990 15 G vs. A 0.292 (G) 0.467 (G) 0.93 (0.90-0.96) 0 (0-37) 9.32e-05
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12151888 chr20:2893954 PTPRA C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs147050647 chr20:2878065 PTPRA C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs6084235 chr20:3018330 PTPRA C - 13 A vs. G 0.167 (A) 0.25 (A) <1 (-) 24 (-) >0.05
rs519276 chr20:2885298 PTPRA C - 13 A vs. G 0.083 (A) 0.167 (A) >1 (-) 26 (-) >0.05
rs6139000 chr20:3048333 OXT [-3933bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs6115778 chr20:3048344 OXT [-3922bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs2325973 chr20:2835014 VPS16 C - 13 A vs. G 0.083 (G) 0.208 (G) <1 (-) 11 (-) >0.05
rs41281234 chr20:3028446 MRPS26 C - 8 T vs. C 0.033 (T) - <1 (-) 45 (-) >0.05
rs6084185 chr20:2838212 VPS16 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12151900 chr20:2894171 PTPRA C - 13 C vs. G 0.142 (G) 0.242 (G) <1 (-) 0 (-) >0.05
rs3787480 chr20:3016895 PTPRA C - 13 A vs. G 0.167 (A) 0.258 (A) <1 (-) 23 (-) >0.05
rs8184236 chr20:3039115 MRPS26 [+10215bp] C - 13 A vs. G 0.45 (G) 0.25 (G) <1 (-) 0 (-) >0.05
rs2740198 chr20:3057127 OXT [+3964bp] C - 12 A vs. C - - >1 (-) 15 (-) >0.05
rs6115779 chr20:3048346 OXT [-3920bp] C - 12 A vs. T - - 1 (-) 0 (-) >0.05
rs1178050 chr20:2934689 PTPRA C - 13 A vs. T 0.083 (T) 0.2 (T) 1 (-) 27 (-) >0.05

Association studies for this region [+]