PUM1, chr1:31404353-31538838 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs45439195 chr1:31439860 PUM1 All: C 103,470 14 A vs. G 0.075 (A) - 1.27 (1.14-1.42) 5 (0-57) 2.29e-05
Meta_image?name=rs45439195

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12563707 chr1:31378965 SDC3 C - 13 C vs. G 0.342 (G) 0.467 (G) <1 (-) 0 (-) <0.05
rs4949326 chr1:31391010 SDC3 [+9402bp] C - 13 T vs. G 0.425 (G) 0.4 (G) >1 (-) 22 (-) <0.05
rs12076304 chr1:31546318 PUM1 [+7480bp] C - 13 T vs. C 0.442 (T) 0.467 (C) >1 (-) 0 (-) <0.05
rs72657272 chr1:31407314 PUM1 C - 12 T vs. C 0.183 (T) - <1 (-) 5 (-) <0.05
rs56834707 chr1:31360261 SDC3 C - 3 A vs. G - - <1 (-) 0 (-) <0.05
rs4949343 chr1:31565763 PUM1 [+26925bp] C - 13 T vs. C 0.442 (T) 0.492 (T) >1 (-) 0 (-) <0.05
rs12760571 chr1:31405404 PUM1 C - 13 A vs. T 0.133 (T) - <1 (-) 0 (-) <0.05
rs4949342 chr1:31565755 PUM1 [+26917bp] C - 13 A vs. G 0.442 (G) 0.492 (G) <1 (-) 0 (-) <0.05
rs1539361 chr1:31444200 PUM1 C - 13 A vs. T 0.392 (A) 0.125 (A) >1 (-) 0 (-) <0.05
rs11578792 chr1:31464855 PUM1 C - 13 A vs. G 0.125 (A) - >1 (-) 0 (-) <0.05
rs10798815 chr1:31356898 SDC3 C - 13 T vs. G 0.125 (G) 0.408 (T) >1 (-) 20 (-) <0.05
rs12753819 chr1:31508189 PUM1 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs35502534 chr1:31521635 PUM1 C - 13 T vs. C 0.092 (T) - >1 (-) 0 (-) <0.05
rs12746021 chr1:31519002 PUM1 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs4245632 chr1:31567588 PUM1 [+28750bp] C - 13 T vs. C 0.442 (T) 0.5 (T) >1 (-) 0 (-) <0.05
rs10914268 chr1:31568931 PUM1 [+30093bp] C - 13 T vs. G 0.475 (G) 0.5 (G) <1 (-) 0 (-) <0.05
rs4949345 chr1:31567181 PUM1 [+28343bp] C - 13 T vs. G 0.442 (G) 0.5 (G) <1 (-) 0 (-) <0.05
rs1890020 chr1:31566838 PUM1 [+28000bp] C - 13 A vs. G 0.442 (A) 0.492 (A) >1 (-) 0 (-) <0.05
rs945697 chr1:31566760 PUM1 [+27922bp] C - 13 C vs. G 0.442 (C) 0.492 (C) >1 (-) 0 (-) <0.05
rs34311692 chr1:31356763 SDC3 C - 13 A vs. G 0.125 (G) - >1 (-) 29 (-) <0.05
rs955809 chr1:31535557 PUM1 C - 13 A vs. G 0.375 (G) 0.133 (G) <1 (-) 0 (-) <0.05
rs72887507 chr1:31550527 PUM1 [+11689bp] C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs72657253 chr1:31360799 SDC3 C - 13 A vs. G 0.117 (A) - <1 (-) 29 (-) <0.05
rs6672383 chr1:31424889 PUM1 C - 13 A vs. G 0.442 (G) 0.483 (G) <1 (-) 0 (-) <0.05
rs147230016 chr1:31390011 SDC3 [+8403bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs34692820 chr1:31355307 SDC3 C - 13 T vs. C 0.117 (T) - <1 (-) 29 (-) <0.05
rs4576693 chr1:31544006 PUM1 [+5168bp] C - 13 A vs. G 0.375 (A) - >1 (-) 0 (-) <0.05
rs56389855 chr1:31540394 PUM1 [+1556bp] C - 13 A vs. G 0.375 (A) 0.133 (A) >1 (-) 0 (-) <0.05
rs35851326 chr1:31395172 PUM1 [-9181bp] C - 13 T vs. C 0.125 (C) - <1 (-) 0 (-) <0.05
rs4949344 chr1:31566117 PUM1 [+27279bp] C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs12066225 chr1:31526251 PUM1 C - 13 A vs. G 0.383 (G) 0.133 (G) <1 (-) 0 (-) <0.05
rs4949192 chr1:31567131 PUM1 [+28293bp] C - 13 T vs. C 0.375 (C) - <1 (-) 0 (-) <0.05
rs10914267 chr1:31568793 PUM1 [+29955bp] C - 13 T vs. C 0.375 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs10914269 chr1:31569231 PUM1 [+30393bp] C - 13 T vs. G 0.4 (G) 0.133 (G) <1 (-) 0 (-) >0.05
rs72657266 chr1:31388786 SDC3 [+7178bp] C - 13 A vs. G 0.108 (A) - <1 (-) 18 (-) >0.05
rs6688010 chr1:31476821 PUM1 C - 13 T vs. C 0.392 (C) 0.133 (C) <1 (-) 0 (-) >0.05
rs1999811 chr1:31464327 PUM1 C - 13 T vs. C 0.375 (C) 0.167 (C) <1 (-) 0 (-) >0.05
rs12118566 chr1:31381106 SDC3 C - 13 C vs. G 0.333 (C) - <1 (-) 29 (-) >0.05
rs945696 chr1:31566345 PUM1 [+27507bp] C - 13 A vs. G 0.375 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs6667620 chr1:31557320 PUM1 [+18482bp] C - 13 A vs. C 0.375 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs2491135 chr1:31445932 PUM1 C - 13 C vs. G 0.383 (C) 0.133 (C) >1 (-) 0 (-) >0.05
rs4949340 chr1:31562297 PUM1 [+23459bp] C - 13 A vs. G 0.375 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs1999810 chr1:31464422 PUM1 C - 13 T vs. C 0.375 (C) 0.167 (C) <1 (-) 0 (-) >0.05
rs7544112 chr1:31403711 PUM1 [-642bp] C - 13 A vs. G 0.375 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs12736798 chr1:31582904 PUM1 [+44066bp] C - 10 A vs. T 0.125 (A) - >1 (-) 0 (-) >0.05
rs4949329 chr1:31440361 PUM1 C - 13 T vs. C 0.375 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs6687993 chr1:31572571 PUM1 [+33733bp] C - 13 T vs. C 0.133 (C) 0.133 (C) >1 (-) 16 (-) >0.05
rs61780504 chr1:31522834 PUM1 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs4949186 chr1:31402148 PUM1 [-2205bp] C - 13 T vs. C 0.375 (T) 0.117 (T) >1 (-) 2 (-) >0.05
rs9661612 chr1:31428852 PUM1 C - 13 A vs. G 0.4 (G) 0.133 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]