PUM1, chr1:31404353-31538838 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs45439195 chr1:31439860 PUM1 All: C 103,470 14 A vs. G 0.075 (A) - 1.27 (1.14-1.42) 5 (0-57) 2.29e-05
Meta_image?name=rs45439195

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10753242 chr1:31494475 PUM1 C - 13 T vs. G 0.192 (G) 0.483 (G) <1 (-) 28 (-) >0.05
rs116391958 chr1:31503421 PUM1 C - 10 A vs. G 0.017 (A) - <1 (-) 26 (-) >0.05
rs6684464 chr1:31445670 PUM1 C - 13 T vs. C 0.158 (T) - >1 (-) 36 (-) >0.05
rs80253649 chr1:31379301 SDC3 C - 13 T vs. C 0.192 (T) 0.175 (T) >1 (-) 30 (-) >0.05
rs76381658 chr1:31519656 PUM1 C - 13 A vs. C 0.192 (C) 0.192 (C) <1 (-) 35 (-) >0.05
rs61778228 chr1:31390045 SDC3 [+8437bp] C - 13 T vs. G - - >1 (-) 13 (-) >0.05
rs12079848 chr1:31564604 PUM1 [+25766bp] C - 13 A vs. T - - <1 (-) 25 (-) >0.05
rs34914959 chr1:31424195 PUM1 C - 13 T vs. C 0.192 (T) 0.483 (T) >1 (-) 36 (-) >0.05
rs146313379 chr1:31382501 SDC3 [+893bp] C - 4 A vs. G - - >1 (-) 17 (-) >0.05
rs12563670 chr1:31384382 SDC3 [+2774bp] C - 13 A vs. C 0.192 (A) 0.492 (A) >1 (-) 32 (-) >0.05
rs76024965 chr1:31488290 PUM1 C - 13 A vs. G - - >1 (-) 27 (-) >0.05
rs142791606 chr1:31516157 PUM1 C - 3 A vs. C - - >1 (-) 0 (-) >0.05
rs78708698 chr1:31558508 PUM1 [+19670bp] C - 13 A vs. G - - <1 (-) 23 (-) >0.05
rs34780639 chr1:31556423 PUM1 [+17585bp] C - 13 A vs. C - - >1 (-) 25 (-) >0.05
rs12079901 chr1:31564710 PUM1 [+25872bp] C - 13 A vs. G 0.192 (G) - <1 (-) 25 (-) >0.05
rs77549753 chr1:31446867 PUM1 C - 13 A vs. G 0.192 (A) 0.475 (A) >1 (-) 32 (-) >0.05
rs72884074 chr1:31448995 PUM1 C - 13 T vs. C 0.192 (C) 0.483 (C) <1 (-) 32 (-) >0.05
rs57063046 chr1:31383397 SDC3 [+1789bp] C - 13 A vs. G 0.192 (A) 0.458 (A) >1 (-) 31 (-) >0.05
rs116854353 chr1:31499860 PUM1 C - 3 A vs. G - 0.05 (G) <1 (-) 0 (-) >0.05
rs76573961 chr1:31565056 PUM1 [+26218bp] C - 13 A vs. G - - <1 (-) 24 (-) >0.05
rs57864908 chr1:31408106 PUM1 C - 13 T vs. C 0.2 (T) 0.233 (T) >1 (-) 37 (-) >0.05
rs10798821 chr1:31515320 PUM1 C - 13 A vs. G 0.175 (G) 0.483 (G) <1 (-) 33 (-) >0.05
rs10798817 chr1:31463581 PUM1 C - 13 T vs. C 0.192 (T) 0.483 (T) >1 (-) 31 (-) >0.05
rs12033888 chr1:31465032 PUM1 C - 13 C vs. G 0.192 (G) 0.483 (G) <1 (-) 30 (-) >0.05
rs12079389 chr1:31473597 PUM1 C - 13 C vs. G 0.183 (G) 0.483 (G) <1 (-) 30 (-) >0.05
rs6684148 chr1:31563981 PUM1 [+25143bp] C - 13 A vs. G 0.192 (A) 0.5 (A) >1 (-) 20 (-) >0.05
rs12068379 chr1:31514763 PUM1 C - 13 T vs. C 0.192 (T) 0.475 (T) >1 (-) 33 (-) >0.05
rs12034311 chr1:31562345 PUM1 [+23507bp] C - 13 A vs. G 0.192 (G) 0.492 (G) <1 (-) 25 (-) >0.05
rs6700556 chr1:31455678 PUM1 C - 13 A vs. C 0.192 (A) 0.483 (A) >1 (-) 32 (-) >0.05
rs58194624 chr1:31391653 SDC3 [+10045bp] C - 13 A vs. G 0.142 (A) 0.217 (A) >1 (-) 35 (-) >0.05
rs7536143 chr1:31520581 PUM1 C - 13 C vs. G 0.192 (G) 0.483 (G) <1 (-) 34 (-) >0.05
rs7514514 chr1:31408056 PUM1 C - 12 T vs. C 0.242 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs12079902 chr1:31564522 PUM1 [+25684bp] C - 13 T vs. C 0.192 (C) 0.5 (C) <1 (-) 25 (-) >0.05
rs60770428 chr1:31410915 PUM1 C - 13 A vs. G 0.192 (A) 0.492 (A) >1 (-) 36 (-) >0.05
rs6659650 chr1:31560369 PUM1 [+21531bp] C - 13 A vs. T 0.192 (T) 0.5 (T) <1 (-) 25 (-) >0.05
rs6425697 chr1:31517117 PUM1 C - 13 A vs. G - - >1 (-) 33 (-) >0.05
rs7526989 chr1:31485149 PUM1 C - 13 A vs. G 0.192 (A) 0.483 (A) >1 (-) 26 (-) >0.05
rs12085650 chr1:31490096 PUM1 C - 13 A vs. G 0.192 (A) 0.467 (A) >1 (-) 25 (-) >0.05
rs10798818 chr1:31487009 PUM1 C - 13 T vs. C 0.183 (C) 0.458 (C) <1 (-) 26 (-) >0.05
rs10753241 chr1:31490614 PUM1 C - 13 A vs. G 0.192 (G) 0.483 (G) <1 (-) 25 (-) >0.05
rs72884036 chr1:31409898 PUM1 C - 13 T vs. C 0.192 (T) 0.483 (T) >1 (-) 38 (-) >0.05
rs6683522 chr1:31387701 SDC3 [+6093bp] C - 13 C vs. G 0.175 (C) 0.5 (C) >1 (-) 32 (-) >0.05
rs10914233 chr1:31388585 SDC3 [+6977bp] C - 13 A vs. G 0.167 (A) 0.5 (A) >1 (-) 33 (-) >0.05
rs6683846 chr1:31563653 PUM1 [+24815bp] C - 13 C vs. G 0.192 (C) 0.5 (C) >1 (-) 25 (-) >0.05
rs72887551 chr1:31562643 PUM1 [+23805bp] C - 13 C vs. G 0.192 (C) 0.467 (C) >1 (-) 24 (-) >0.05
rs12075967 chr1:31551739 PUM1 [+12901bp] C - 13 A vs. G 0.183 (G) 0.5 (G) <1 (-) 24 (-) >0.05
rs7535517 chr1:31557945 PUM1 [+19107bp] C - 13 C vs. G 0.192 (C) 0.492 (G) >1 (-) 25 (-) >0.05
rs7535605 chr1:31558053 PUM1 [+19215bp] C - 13 A vs. G 0.192 (A) 0.5 (A) >1 (-) 25 (-) >0.05
rs6667217 chr1:31556942 PUM1 [+18104bp] C - 13 A vs. G 0.192 (G) 0.5 (G) <1 (-) 25 (-) >0.05
rs6425702 chr1:31558965 PUM1 [+20127bp] C - 13 A vs. G 0.192 (A) - >1 (-) 25 (-) >0.05

Association studies for this region [+]