PUM1, chr1:31404353-31538838 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs45439195 chr1:31439860 PUM1 All: C 103,470 14 A vs. G 0.075 (A) - 1.27 (1.14-1.42) 5 (0-57) 2.29e-05
Meta_image?name=rs45439195

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6678306 chr1:31556968 PUM1 [+18130bp] C - 13 A vs. G 0.192 (A) 0.5 (A) >1 (-) 25 (-) >0.05
rs60398448 chr1:31391860 SDC3 [+10252bp] C - 13 A vs. G 0.175 (A) 0.225 (A) >1 (-) 36 (-) >0.05
rs12569263 chr1:31572349 PUM1 [+33511bp] C - 3 A vs. C - 0.125 (A) >1 (-) 0 (-) >0.05
rs72887531 chr1:31556478 PUM1 [+17640bp] C - 13 T vs. C - - >1 (-) 25 (-) >0.05
rs12566545 chr1:31556264 PUM1 [+17426bp] C - 13 T vs. C 0.192 (C) 0.5 (C) <1 (-) 25 (-) >0.05
rs6660628 chr1:31555266 PUM1 [+16428bp] C - 13 A vs. G 0.192 (G) 0.5 (G) <1 (-) 24 (-) >0.05
rs10914265 chr1:31553755 PUM1 [+14917bp] C - 13 A vs. G 0.167 (G) 0.5 (G) <1 (-) 25 (-) >0.05
rs6660171 chr1:31554817 PUM1 [+15979bp] C - 13 A vs. G 0.167 (G) - <1 (-) 25 (-) >0.05
rs2002491 chr1:31529325 PUM1 C - 13 T vs. C - - <1 (-) 33 (-) >0.05
rs10159428 chr1:31552950 PUM1 [+14112bp] C - 13 A vs. G 0.192 (G) 0.5 (G) <1 (-) 26 (-) >0.05
rs6699207 chr1:31555478 PUM1 [+16640bp] C - 13 A vs. C 0.192 (A) 0.492 (A) >1 (-) 25 (-) >0.05
rs7530948 chr1:31398348 PUM1 [-6005bp] C - 13 T vs. C - - >1 (-) 37 (-) >0.05
rs6704071 chr1:31552472 PUM1 [+13634bp] C - 13 T vs. C - - <1 (-) 26 (-) >0.05
rs10798822 chr1:31525641 PUM1 C - 13 T vs. C 0.192 (T) 0.467 (T) >1 (-) 33 (-) >0.05
rs6669719 chr1:31556909 PUM1 [+18071bp] C - 13 T vs. C 0.192 (C) 0.5 (C) <1 (-) 26 (-) >0.05
rs76787077 chr1:31546226 PUM1 [+7388bp] C - 3 T vs. G - 0.042 (G) <1 (-) 0 (-) >0.05
rs148973568 chr1:31547669 PUM1 [+8831bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs6678205 chr1:31556901 PUM1 [+18063bp] C - 13 A vs. G 0.192 (A) 0.5 (A) >1 (-) 26 (-) >0.05
rs75079440 chr1:31486224 PUM1 C - 11 T vs. C 0.067 (C) - <1 (-) 0 (-) >0.05
rs150139898 chr1:31560422 PUM1 [+21584bp] C - 3 A vs. C - - <1 (-) 0 (-) >0.05
rs10157117 chr1:31553155 PUM1 [+14317bp] C - 13 T vs. G 0.192 (G) 0.492 (G) <1 (-) 23 (-) >0.05
rs117060152 chr1:31560272 PUM1 [+21434bp] C - 3 T vs. C - 0.042 (C) <1 (-) 0 (-) >0.05
rs117728950 chr1:31540510 PUM1 [+1672bp] C - 3 A vs. G - 0.042 (A) >1 (-) 0 (-) >0.05
rs60374411 chr1:31547434 PUM1 [+8596bp] C - 13 T vs. C - - >1 (-) 26 (-) >0.05
rs10914232 chr1:31388559 SDC3 [+6951bp] C - 13 T vs. C 0.183 (C) 0.5 (C) <1 (-) 32 (-) >0.05
rs6704412 chr1:31528844 PUM1 C - 13 A vs. T 0.192 (T) 0.492 (T) <1 (-) 33 (-) >0.05
rs4294461 chr1:31396989 PUM1 [-7364bp] C - 13 A vs. C - - >1 (-) 37 (-) >0.05
rs12061368 chr1:31519865 PUM1 C - 13 T vs. C - - <1 (-) 35 (-) >0.05
rs6696444 chr1:31542580 PUM1 [+3742bp] C - 13 A vs. G 0.192 (A) 0.458 (A) >1 (-) 27 (-) >0.05
rs7541897 chr1:31543039 PUM1 [+4201bp] C - 13 T vs. C 0.192 (C) 0.492 (C) <1 (-) 26 (-) >0.05
rs10914263 chr1:31548601 PUM1 [+9763bp] C - 13 T vs. C 0.183 (T) - >1 (-) 25 (-) >0.05
rs10157595 chr1:31553148 PUM1 [+14310bp] C - 13 A vs. G 0.192 (A) 0.483 (A) >1 (-) 24 (-) >0.05
rs7524719 chr1:31533235 PUM1 C - 13 A vs. G - - <1 (-) 31 (-) >0.05
rs76933807 chr1:31357668 SDC3 C - 12 T vs. C 0.075 (T) - >1 (-) 0 (-) >0.05
rs2002492 chr1:31529399 PUM1 C - 13 A vs. G 0.183 (G) 0.483 (G) <1 (-) 31 (-) >0.05
rs12028150 chr1:31531627 PUM1 C - 13 A vs. G - - >1 (-) 32 (-) >0.05
rs6672947 chr1:31542646 PUM1 [+3808bp] C - 13 T vs. C 0.183 (T) 0.458 (T) >1 (-) 28 (-) >0.05
rs4279888 chr1:31554110 PUM1 [+15272bp] C - 13 A vs. C 0.2 (C) 0.5 (C) <1 (-) 27 (-) >0.05
rs10914257 chr1:31534292 PUM1 C - 13 A vs. G - - >1 (-) 31 (-) >0.05
rs10914261 chr1:31541472 PUM1 [+2634bp] C - 13 A vs. C - - >1 (-) 29 (-) >0.05
rs10914260 chr1:31541446 PUM1 [+2608bp] C - 13 A vs. G - - <1 (-) 29 (-) >0.05
rs7529390 chr1:31372686 SDC3 C - 9 A vs. C 0.1 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs16834208 chr1:31536869 PUM1 C - 13 A vs. G 0.192 (G) 0.483 (G) <1 (-) 30 (-) >0.05
rs34793487 chr1:31367034 SDC3 C - 9 C vs. G 0.042 (C) 0.033 (C) <1 (-) 8 (-) >0.05
rs78366654 chr1:31367548 SDC3 C - 9 T vs. C 0.05 (C) 0.067 (C) >1 (-) 7 (-) >0.05
rs7526662 chr1:31539051 PUM1 [+213bp] C - 13 A vs. G 0.192 (G) 0.492 (G) <1 (-) 29 (-) >0.05
rs7412502 chr1:31361327 SDC3 C - 13 A vs. C 0.492 (A) 0.308 (A) >1 (-) 10 (-) >0.05
rs34418949 chr1:31371089 SDC3 C - 9 T vs. C 0.05 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs72657262 chr1:31377975 SDC3 C - 13 T vs. G 0.467 (T) 0.483 (T) <1 (-) 0 (-) >0.05
rs35395844 chr1:31367744 SDC3 C - 9 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05

Association studies for this region [+]