RAI1, chr17:17584787-17714767 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11868035 chr17:17715101 SREBF1 All: C 120,238 21 A vs. G 0.258 (A) 0.142 (G) 0.94 (0.91-0.97) 40 (0-65) 2.43e-05
Meta_image?name=rs11868035

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11868035 chr17:17715101 SREBF1 All: C 120,238 21 A vs. G 0.258 (A) 0.142 (G) 0.94 (0.91-0.97) 40 (0-65) 2.43e-05
rs4924821 chr17:17735952 SREBF1 All: C 108,990 15 T vs. C 0.333 (T) 0.042 (C) 0.93 (0.90-0.97) 14 (0-52) 5.20e-05
rs12450799 chr17:17730201 SREBF1 All: C 108,990 15 T vs. C 0.292 (T) 0.042 (C) 0.94 (0.90-0.97) 19 (0-56) 6.09e-05
rs13306736 chr17:17740281 SREBF1 All: C 108,990 15 C vs. T 0.342 (C) - 0.94 (0.91-0.97) 24 (0-59) 9.37e-05
rs4925117 chr17:17736252 SREBF1 All: C 108,990 15 C vs. A - - 1.07 (1.03-1.10) 27 (0-61) 9.67e-05
rs8079321 chr17:17760789 TOM1L2 All: C 108,990 15 T vs. C 0.292 (T) 0.125 (C) 0.94 (0.91-0.97) 26 (0-60) 1.62e-04
rs9902941 chr17:17733760 SREBF1 All: C 108,990 15 C vs. T 0.292 (C) 0.042 (T) 0.94 (0.91-0.97) 30 (0-63) 1.64e-04
rs1889018 chr17:17734740 SREBF1 All: C 108,990 15 G vs. A 0.292 (G) - 0.94 (0.91-0.97) 29 (0-62) 1.68e-04
rs140882060 chr17:17658583 RAI1 C - 8 A vs. G - - <1 (-) 0 (-) <0.05
chr17:17626439 chr17:17626439 RAI1 C - 3 T vs. C - - >1 (-) 35 (-) <0.05
rs79214154 chr17:17579213 RAI1 [-5574bp] C - 4 T vs. C 0.033 (C) - >1 (-) 0 (-) <0.05
rs6502612 chr17:17577771 RAI1 [-7016bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
chr17:17619659 chr17:17619659 RAI1 C - 4 A vs. C - - <1 (-) 5 (-) >0.05
rs143176806 chr17:17624491 RAI1 C - 4 T vs. C - - >1 (-) 4 (-) >0.05
rs114013612 chr17:17691730 RAI1 C - 7 A vs. G - - >1 (-) 31 (-) >0.05
rs76556206 chr17:17638168 RAI1 C - 3 C vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs11659047 chr17:17543412 RAI1 [-41375bp] C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs78711184 chr17:17739435 SREBF1 C - 4 C vs. G - - >1 (-) 0 (-) >0.05
rs77716216 chr17:17562578 RAI1 [-22209bp] C - 13 T vs. G 0.058 (T) - <1 (-) 0 (-) >0.05
rs11654482 chr17:17617087 RAI1 C - 13 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs11656769 chr17:17599850 RAI1 C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs8079880 chr17:17629992 RAI1 C - 13 T vs. C 0.058 (C) - >1 (-) 0 (-) >0.05
rs117108944 chr17:17595715 RAI1 C - 13 A vs. G 0.05 (G) - >1 (-) 0 (-) >0.05
rs76444726 chr17:17632105 RAI1 C - 13 T vs. G 0.058 (T) - <1 (-) 0 (-) >0.05
rs149202767 chr17:17741804 SREBF1 [+1479bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs80318113 chr17:17689629 RAI1 C - 12 A vs. G - - >1 (-) 15 (-) >0.05
rs151127579 chr17:17549080 RAI1 [-35707bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11653696 chr17:17634281 RAI1 C - 13 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs11078396 chr17:17647396 RAI1 C - 13 T vs. G 0.058 (T) - <1 (-) 0 (-) >0.05
rs11078397 chr17:17659857 RAI1 C - 13 C vs. G 0.058 (C) - <1 (-) 0 (-) >0.05
rs57638011 chr17:17535277 PEMT [+40255bp] C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs11653424 chr17:17646776 RAI1 C - 13 A vs. G 0.058 (A) - <1 (-) 0 (-) >0.05
rs35367147 chr17:17730031 SREBF1 C - 13 A vs. C 0.017 (A) - <1 (-) 0 (-) >0.05
rs11652574 chr17:17728815 SREBF1 C - 13 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs76381434 chr17:17647770 RAI1 C - 13 A vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs149586126 chr17:17601018 RAI1 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs11652525 chr17:17661555 RAI1 C - 13 A vs. C 0.058 (C) - >1 (-) 0 (-) >0.05
rs150356346 chr17:17670416 RAI1 C - 11 A vs. C - - <1 (-) 17 (-) >0.05
rs28715719 chr17:17535436 PEMT [+40414bp] C - 13 C vs. G 0.05 (G) - >1 (-) 0 (-) >0.05
rs8074981 chr17:17534854 PEMT [+39832bp] C - 13 A vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs56327101 chr17:17535138 PEMT [+40116bp] C - 13 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs9896285 chr17:17535847 PEMT [+40825bp] C - 13 T vs. C 0.05 (T) - <1 (-) 0 (-) >0.05
rs62066215 chr17:17540249 RAI1 [-44538bp] C - 13 A vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs11651383 chr17:17657478 RAI1 C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs56177028 chr17:17534989 PEMT [+39967bp] C - 13 A vs. G 0.05 (A) - <1 (-) 0 (-) >0.05
rs9911890 chr17:17762970 TOM1L2 C - 13 A vs. G 0.042 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs57006959 chr17:17751506 TOM1L2 C - 6 T vs. C - - <1 (-) 25 (-) >0.05
rs59713490 chr17:17751612 TOM1L2 C - 6 T vs. C - 0.042 (T) >1 (-) 25 (-) >0.05
rs60889477 chr17:17675545 RAI1 C - 13 A vs. G 0.058 (G) - >1 (-) 0 (-) >0.05
rs75951652 chr17:17636526 RAI1 C - 6 A vs. C - - >1 (-) 16 (-) >0.05

Association studies for this region [+]