RNU6-283P, chr6:31337911-31338017 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9266630 chr6:31346869 RNU6-283P [+8852bp] All: C 103,235 14 A vs. C 0.258 (A) 0.2 (A) 1.09 (1.05-1.13) 10 (0-49) 1.25e-05
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2596549 chr6:31331166 HLA-B [+6201bp] All: C 96,035 11 A vs. G 0.192 (A) 0.075 (A) 1.08 (1.03-1.14) 7 (0-63) 9.58e-04
rs9378248 chr6:31326289 HLA-B [+1324bp] C - 6 A vs. G 0.217 (A) 0.5 (A) <1 (-) 0 (-) <0.05
rs2854003 chr6:31313984 HLA-B [-7665bp] All: C 84,927 7 A vs. G 0.375 (A) 0.417 (A) 0.92 (0.87-0.97) 0 (0-69) 0.001
rs2442725 chr6:31319896 HLA-B [-1753bp] C - 4 T vs. C 0.467 (T) 0.492 (C) >1 (-) 30 (-) <0.05
rs2442726 chr6:31319891 HLA-B [-1758bp] C - 4 T vs. G 0.45 (G) 0.483 (G) <1 (-) 30 (-) <0.05
rs9265676 chr6:31301000 HLA-B [-20649bp] C - 3 T vs. G 0.208 (G) 0.133 (G) <1 (-) 29 (-) <0.05
rs2596478 chr6:31327861 HLA-B [+2896bp] C - 9 T vs. C - - <1 (-) 18 (-) <0.05
rs9265957 chr6:31315374 HLA-B [-6275bp] C - 6 C vs. G 0.225 (G) 0.283 (G) >1 (-) 2 (-) <0.05
rs2596520 chr6:31316481 HLA-B [-5168bp] C - 8 T vs. C 0.242 (T) 0.133 (T) >1 (-) 31 (-) <0.05
rs115378916 chr6:31347768 RNU6-283P [+9751bp] C - 10 A vs. T 0.067 (T) 0.125 (T) <1 (-) 32 (-) <0.05
rs13202464 chr6:31344583 RNU6-283P [+6566bp] C - 10 A vs. G 0.067 (G) 0.125 (G) <1 (-) 31 (-) <0.05
rs9405084 chr6:31326251 HLA-B [+1286bp] C - 7 T vs. C - - <1 (-) 0 (-) <0.05
rs2596429 chr6:31334821 RNU6-283P [-3090bp] C - 9 A vs. T 0.192 (A) 0.042 (A) >1 (-) 21 (-) <0.05
rs35658952 chr6:31327452 HLA-B [+2487bp] All: C 73,071 4 C vs. T - - 0.74 (0.60-0.90) 47 (0-82) 0.002
rs2853976 chr6:31345270 RNU6-283P [+7253bp] All: C 103,235 14 C vs. T 0.442 (C) 0.442 (C) 1.05 (1.02-1.09) 0 (0-39) 0.003
rs9266718 chr6:31349788 RNU6-283P [+11771bp] C - 12 T vs. C 0.342 (C) 0.142 (C) <1 (-) 27 (-) <0.05
rs2596518 chr6:31316759 HLA-B [-4890bp] C - 7 A vs. G 0.225 (G) 0.167 (G) <1 (-) 29 (-) <0.05
rs9266366 chr6:31333032 RNU6-283P [-4879bp] C - 9 T vs. C - - >1 (-) 19 (-) <0.05
rs28428768 chr6:31319529 HLA-B [-2120bp] C - 4 T vs. C 0.042 (C) 0.092 (C) >1 (-) 7 (-) <0.05
rs2596548 chr6:31330546 HLA-B [+5581bp] C - 9 T vs. G 0.192 (T) 0.075 (T) >1 (-) 19 (-) <0.05
rs9265963 chr6:31315540 HLA-B [-6109bp] C - 7 A vs. G 0.233 (A) 0.133 (A) >1 (-) 30 (-) <0.05
rs2523620 chr6:31317514 HLA-B [-4135bp] All: C 92,086 10 C vs. A 0.217 (C) 0.142 (C) 1.09 (1.03-1.15) 29 (0-66) 0.003
rs9265959 chr6:31315425 HLA-B [-6224bp] C - 7 T vs. C 0.225 (T) 0.133 (T) >1 (-) 31 (-) <0.05
rs2523553 chr6:31331948 RNU6-283P [-5963bp] C - 9 A vs. C 0.192 (C) 0.075 (C) <1 (-) 16 (-) <0.05
rs9265893 chr6:31313339 HLA-B [-8310bp] C - 5 A vs. G 0.292 (G) 0.267 (G) <1 (-) 57 (-) <0.05
rs7450302 chr6:31313362 HLA-B [-8287bp] C - 5 T vs. C 0.258 (T) 0.217 (T) >1 (-) 58 (-) <0.05
rs3016016 chr6:31333006 RNU6-283P [-4905bp] C - 9 A vs. G - - >1 (-) 21 (-) <0.05
rs2442721 chr6:31320242 HLA-B [-1407bp] C - 4 T vs. C 0.467 (C) 0.417 (C) <1 (-) 18 (-) <0.05
rs35267732 chr6:31326779 HLA-B [+1814bp] C - 4 A vs. T 0.067 (A) 0.133 (A) >1 (-) 0 (-) <0.05
rs2523557 chr6:31331257 HLA-B [+6292bp] C - 11 A vs. G 0.433 (G) 0.133 (G) <1 (-) 54 (-) <0.05
rs2523489 chr6:31348878 RNU6-283P [+10861bp] All: C 103,235 14 T vs. C 0.292 (T) 0.108 (T) 1.06 (1.02-1.09) 11 (0-49) 0.005
rs3016015 chr6:31333091 RNU6-283P [-4820bp] C - 10 A vs. G 0.183 (A) 0.075 (A) >1 (-) 19 (-) <0.05
rs7450349 chr6:31313378 HLA-B [-8271bp] C - 5 A vs. G 0.208 (A) 0.075 (A) >1 (-) 48 (-) <0.05
rs2442722 chr6:31320241 HLA-B [-1408bp] C - 4 A vs. G 0.158 (A) 0.117 (A) <1 (-) 49 (-) <0.05
rs9266363 chr6:31332977 RNU6-283P [-4934bp] C - 10 A vs. G - - >1 (-) 19 (-) <0.05
rs2844576 chr6:31334601 RNU6-283P [-3310bp] C - 10 T vs. C 0.217 (T) 0.075 (T) >1 (-) 20 (-) <0.05
rs2523542 chr6:31335156 RNU6-283P [-2755bp] C - 10 A vs. G 0.192 (A) 0.075 (A) >1 (-) 20 (-) <0.05
rs2596427 chr6:31334393 RNU6-283P [-3518bp] C - 10 A vs. T 0.208 (A) 0.075 (A) >1 (-) 20 (-) <0.05
rs9265456 chr6:31296575 HLA-B [-25074bp] C - 3 A vs. G 0.375 (G) 0.142 (G) <1 (-) 8 (-) <0.05
rs2523485 chr6:31351035 RNU6-283P [+13018bp] All: C 103,235 14 T vs. C 0.183 (T) 0.042 (T) 1.07 (1.02-1.12) 25 (0-61) 0.006
rs2596426 chr6:31334264 RNU6-283P [-3647bp] C - 10 T vs. C 0.192 (T) - >1 (-) 20 (-) <0.05
rs2523537 chr6:31335707 RNU6-283P [-2204bp] C - 10 A vs. G 0.192 (A) 0.05 (A) >1 (-) 20 (-) <0.05
rs2523545 chr6:31333499 RNU6-283P [-4412bp] C - 12 A vs. G 0.425 (G) 0.108 (G) <1 (-) 50 (-) <0.05
rs2853991 chr6:31336812 RNU6-283P [-1099bp] C - 10 A vs. G 0.2 (A) 0.075 (A) >1 (-) 20 (-) <0.05
rs2854004 chr6:31313972 HLA-B [-7677bp] C - 5 A vs. G 0.392 (A) 0.383 (A) <1 (-) 0 (-) <0.05
rs2250292 chr6:31330334 HLA-B [+5369bp] C - 12 A vs. T 0.475 (A) 0.483 (T) <1 (-) 0 (-) <0.05
rs9266634 chr6:31346978 RNU6-283P [+8961bp] C - 12 A vs. T 0.433 (A) 0.383 (A) >1 (-) 0 (-) <0.05
rs2854006 chr6:31313591 HLA-B [-8058bp] C - 5 A vs. G 0.217 (A) 0.133 (A) >1 (-) 54 (-) <0.05
rs2854007 chr6:31313586 HLA-B [-8063bp] C - 5 A vs. G 0.217 (G) 0.133 (G) <1 (-) 54 (-) <0.05
rs9265929 chr6:31314313 HLA-B [-7336bp] C - 5 T vs. C 0.208 (C) 0.133 (C) <1 (-) 56 (-) <0.05

Association studies for this region [+]