SAMD4A, chr14:55033815-55260033 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10142221 chr14:55297916 GCH1 [-10810bp] All: C 108,990 15 T vs. C - - 1.10 (1.06-1.14) 0 (0-49) 7.46e-08
Meta_image?name=rs10142221

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10142221 chr14:55297916 GCH1 [-10810bp] All: C 108,990 15 T vs. C - - 1.10 (1.06-1.14) 0 (0-49) 7.46e-08
rs17127992 chr14:55296729 GCH1 [-11997bp] All: C 108,990 15 G vs. T 0.233 (G) 0.4 (G) 0.89 (0.85-0.93) 45 (0-70) 8.58e-08
rs10135789 chr14:55292020 GCH1 [-16706bp] All: C 108,990 15 G vs. A 0.392 (G) 0.425 (G) 0.91 (0.87-0.94) 0 (0-49) 9.47e-08
rs7141685 chr14:55290469 GCH1 [-18257bp] All: C 108,990 15 T vs. G 0.392 (T) 0.442 (T) 0.91 (0.87-0.94) 0 (0-49) 9.47e-08
rs9323272 chr14:55288924 GCH1 [-19802bp] All: C 108,990 15 A vs. G 0.392 (A) 0.442 (A) 0.91 (0.87-0.94) 0 (0-51) 1.11e-07
rs72713460 chr14:55297043 GCH1 [-11683bp] All: C 108,990 15 T vs. G 0.225 (T) 0.142 (T) 0.89 (0.85-0.93) 43 (0-69) 1.17e-07
rs72713456 chr14:55291048 GCH1 [-17678bp] All: C 108,990 15 C vs. T 0.233 (C) 0.408 (C) 0.89 (0.85-0.93) 44 (0-70) 1.18e-07
rs72713453 chr14:55285160 GCH1 [-23566bp] All: C 108,990 15 T vs. C 0.233 (T) 0.392 (T) 0.89 (0.85-0.93) 46 (1-70) 1.19e-07
rs7144602 chr14:55285588 GCH1 [-23138bp] All: C 108,990 15 G vs. T 0.392 (G) 0.442 (G) 0.91 (0.87-0.94) 2 (0-54) 1.44e-07
rs55985131 chr14:55290019 GCH1 [-18707bp] All: C 108,990 15 T vs. C 0.25 (T) 0.4 (T) 0.89 (0.85-0.93) 45 (0-70) 2.29e-07
rs17671090 chr14:55291644 GCH1 [-17082bp] All: C 108,990 15 A vs. G 0.392 (A) 0.433 (A) 0.91 (0.87-0.94) 0 (0-50) 2.37e-07
rs17128004 chr14:55306240 GCH1 [-2486bp] All: C 108,990 15 A vs. C 0.233 (A) 0.4 (A) 0.90 (0.87-0.94) 40 (0-67) 6.76e-07
rs2145945 chr14:55304080 GCH1 [-4646bp] All: C 108,990 15 A vs. G 0.392 (A) 0.442 (A) 0.92 (0.89-0.95) 0 (0-48) 6.76e-07
rs2057369 chr14:55304061 GCH1 [-4665bp] All: C 108,990 15 A vs. G 0.233 (A) 0.4 (A) 0.90 (0.87-0.94) 38 (0-66) 7.43e-07
rs2057368 chr14:55304009 GCH1 [-4717bp] All: C 108,990 15 A vs. G 0.225 (A) 0.4 (A) 0.90 (0.87-0.94) 38 (0-66) 7.44e-07
rs57875940 chr14:55301494 GCH1 [-7232bp] All: C 108,990 15 A vs. G 0.233 (A) 0.125 (A) 0.90 (0.86-0.94) 38 (0-66) 8.71e-07
rs7148266 chr14:55300378 GCH1 [-8348bp] All: C 108,990 15 T vs. C 0.233 (T) 0.4 (T) 0.90 (0.87-0.94) 40 (0-67) 8.73e-07
rs7154323 chr14:55301454 GCH1 [-7272bp] All: C 108,990 15 G vs. A 0.242 (G) 0.4 (G) 0.87 (0.81-0.92) 21 (0-57) 7.85e-06
rs1202667 chr14:55037156 SAMD4A C - 13 A vs. G 0.283 (A) 0.45 (G) <1 (-) 15 (-) <1.00e-04
rs7151058 chr14:55295940 GCH1 [-12786bp] C - 13 C vs. G 0.242 (G) 0.408 (G) >1 (-) 47 (-) <0.05
rs1954208 chr14:55024957 SAMD4A [-8858bp] C - 13 T vs. C - 0.467 (C) <1 (-) 17 (-) <0.05
rs10483639 chr14:55306457 GCH1 [-2269bp] C - 13 C vs. G 0.233 (C) 0.4 (C) <1 (-) 39 (-) <0.05
rs11626634 chr14:55041470 SAMD4A All: C 108,990 15 A vs. G 0.075 (A) 0.142 (A) 0.90 (0.85-0.96) 18 (0-55) 0.002
rs1212968 chr14:55043520 SAMD4A C - 13 A vs. C 0.133 (C) 0.45 (A) >1 (-) 28 (-) <0.05
rs1951951 chr14:55096118 SAMD4A C - 13 A vs. G 0.35 (G) 0.133 (G) >1 (-) 0 (-) <0.05
rs4548793 chr14:55034066 SAMD4A All: C 108,990 15 A vs. G 0.075 (A) - 0.91 (0.85-0.97) 7 (0-43) 0.003
rs1951952 chr14:55096397 SAMD4A C - 13 T vs. C 0.342 (C) 0.125 (C) >1 (-) 0 (-) <0.05
rs61975112 chr14:55026435 SAMD4A [-7380bp] All: C 108,990 15 G vs. C 0.075 (G) 0.142 (G) 0.91 (0.85-0.97) 12 (0-50) 0.004
rs2794262 chr14:55043364 SAMD4A C - 13 C vs. G 0.133 (G) 0.458 (G) >1 (-) 20 (-) <0.05
rs1307289 chr14:55042615 SAMD4A C - 13 A vs. G 0.142 (G) 0.45 (A) >1 (-) 29 (-) <0.05
rs3742559 chr14:55034952 SAMD4A C - 13 T vs. C 0.142 (C) - >1 (-) 28 (-) <0.05
rs61975109 chr14:55025550 SAMD4A [-8265bp] C - 13 C vs. G 0.05 (G) - >1 (-) 0 (-) <0.05
rs3742558 chr14:55034879 SAMD4A C - 13 T vs. C 0.25 (C) - >1 (-) 0 (-) <0.05
rs7161654 chr14:55281360 SAMD4A [+21327bp] C - 13 T vs. C 0.267 (C) 0.342 (T) <1 (-) 0 (-) <0.05
rs10498470 chr14:55105024 SAMD4A C - 13 T vs. C 0.142 (C) 0.117 (C) >1 (-) 15 (-) <0.05
rs17832215 chr14:55104308 SAMD4A C - 13 T vs. C 0.142 (T) 0.117 (T) <1 (-) 15 (-) <0.05
rs60837271 chr14:55079912 SAMD4A C - 13 A vs. G 0.25 (G) 0.392 (G) <1 (-) 11 (-) <0.05
rs61975128 chr14:55075505 SAMD4A C - 13 T vs. C 0.267 (C) 0.392 (C) <1 (-) 6 (-) <0.05
rs4901525 chr14:55083102 SAMD4A C - 13 A vs. T 0.25 (T) 0.392 (T) <1 (-) 5 (-) <0.05
rs2147537 chr14:55098313 SAMD4A All: C 108,990 15 C vs. T 0.142 (C) 0.025 (C) 1.06 (1.01-1.11) 0 (0-47) 0.010
rs17832209 chr14:55092855 SAMD4A All: C 108,990 15 G vs. A 0.142 (G) 0.025 (G) 1.06 (1.01-1.11) 0 (0-50) 0.011
rs1998671 chr14:55092303 SAMD4A All: C 108,990 15 A vs. T 0.142 (A) 0.025 (A) 1.06 (1.01-1.11) 0 (0-50) 0.011
rs4143720 chr14:55007435 CGRRF1 [+1868bp] C - 13 C vs. G 0.142 (G) 0.392 (G) >1 (-) 39 (-) <0.05
rs880120 chr14:55095891 SAMD4A All: C 108,990 15 T vs. C 0.142 (T) 0.025 (T) 1.06 (1.01-1.11) 0 (0-50) 0.013
rs4901520 chr14:55022454 SAMD4A [-11361bp] C - 13 A vs. G 0.125 (A) 0.467 (G) <1 (-) 23 (-) <0.05
rs11628740 chr14:55101273 SAMD4A C - 13 T vs. C 0.375 (T) 0.475 (T) >1 (-) 0 (-) <0.05
rs58804069 chr14:54989816 CGRRF1 C - 13 A vs. G - - >1 (-) 36 (-) <0.05
rs72660229 chr14:55156468 SAMD4A C - 6 T vs. C 0.008 (T) 0.05 (T) <1 (-) 24 (-) <0.05
rs9783664 chr14:55030847 SAMD4A [-2968bp] C - 13 T vs. G 0.125 (T) 0.458 (G) <1 (-) 28 (-) <0.05
rs72660231 chr14:55161067 SAMD4A C - 6 A vs. G 0.008 (G) 0.05 (G) >1 (-) 25 (-) <0.05

Association studies for this region [+]