SCP2, chr1:53392901-53517375 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2906770 chr1:53471432 SCP2 All: C 108,990 15 C vs. A - - 1.13 (1.07-1.20) 40 (0-68) 5.39e-05
Meta_image?name=rs2906770

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11206066 chr1:53469134 SCP2 C - 13 T vs. C 0.092 (C) 0.4 (C) >1 (-) 2 (-) >0.05
rs2275455 chr1:53535924 PODN C - 13 A vs. C - 0.25 (C) >1 (-) 0 (-) >0.05
rs56347603 chr1:53476902 SCP2 C - 13 A vs. G 0.025 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs2275454 chr1:53535918 PODN C - 13 A vs. C 0.033 (C) 0.25 (C) >1 (-) 0 (-) >0.05
rs11206084 chr1:53526696 PODN [-1158bp] C - 13 C vs. G 0.025 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs7516939 chr1:53453683 SCP2 C - 13 T vs. C 0.092 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs17107803 chr1:53530617 PODN C - 13 A vs. C 0.033 (C) 0.033 (C) <1 (-) 0 (-) >0.05
rs725509 chr1:53526104 PODN [-1750bp] C - 13 A vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs145437178 chr1:53472869 SCP2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7513730 chr1:53527948 PODN C - 13 T vs. G - - >1 (-) 19 (-) >0.05
rs7528565 chr1:53453640 SCP2 C - 13 A vs. G 0.092 (G) 0.408 (G) <1 (-) 0 (-) >0.05
rs58148442 chr1:53495621 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs10437068 chr1:53531275 PODN C - 13 A vs. G 0.033 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs17376279 chr1:53525481 PODN [-2373bp] C - 13 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs7544995 chr1:53448372 SCP2 C - 13 A vs. G 0.1 (G) 0.383 (G) <1 (-) 0 (-) >0.05
rs17107661 chr1:53495410 SCP2 C - 12 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs57357228 chr1:53454555 SCP2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs76073008 chr1:53435577 SCP2 C - 13 T vs. C 0.025 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs6678994 chr1:53479940 SCP2 C - 12 A vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs10158910 chr1:53532117 PODN C - 13 A vs. G 0.067 (G) 0.342 (G) <1 (-) 0 (-) >0.05
rs4926939 chr1:53452087 SCP2 C - 13 T vs. C 0.1 (T) 0.408 (T) <1 (-) 0 (-) >0.05
rs7527979 chr1:53452848 SCP2 C - 13 T vs. G 0.092 (G) - >1 (-) 2 (-) >0.05
rs12063529 chr1:53455543 SCP2 C - 13 A vs. G 0.092 (G) 0.4 (G) <1 (-) 0 (-) >0.05
rs6588460 chr1:53511139 SCP2 C - 13 A vs. G 0.058 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs10437070 chr1:53531449 PODN C - 13 A vs. T 0.1 (A) 0.417 (A) <1 (-) 11 (-) >0.05
rs72901316 chr1:53452808 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05

Association studies for this region [+]