SCP2, chr1:53392901-53517375 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2906770 chr1:53471432 SCP2 All: C 108,990 15 C vs. A - - 1.13 (1.07-1.20) 40 (0-68) 5.39e-05
Meta_image?name=rs2906770

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs111813961 chr1:53349906 ZYG11A C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs506527 chr1:53350683 ZYG11A C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs550561 chr1:53375134 ECHDC2 C - 13 T vs. C 0.308 (C) 0.275 (T) <1 (-) 0 (-) >0.05
rs1242198 chr1:53352016 ZYG11A C - 13 A vs. G 0.317 (G) 0.025 (A) <1 (-) 0 (-) >0.05
rs562641 chr1:53374666 ECHDC2 C - 13 T vs. C 0.308 (C) 0.267 (T) <1 (-) 0 (-) >0.05
rs7552139 chr1:53387379 ECHDC2 C - 13 C vs. G 0.342 (G) - <1 (-) 0 (-) >0.05
rs2790427 chr1:53530786 PODN C - 12 A vs. G 0.35 (G) - >1 (-) 0 (-) >0.05
rs143730488 chr1:53425285 SCP2 C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs1242314 chr1:53417544 SCP2 C - 13 A vs. G - 0.258 (G) >1 (-) 0 (-) >0.05
rs12026882 chr1:53449365 SCP2 C - 9 C vs. G - 0.208 (G) >1 (-) 45 (-) >0.05
rs522259 chr1:53365481 ECHDC2 C - 13 A vs. G 0.3 (A) 0.258 (G) >1 (-) 0 (-) >0.05
rs576891 chr1:53364976 ECHDC2 C - 13 A vs. G 0.3 (A) 0.267 (G) >1 (-) 0 (-) >0.05
rs511599 chr1:53362818 ECHDC2 C - 13 T vs. C 0.3 (T) 0.267 (C) >1 (-) 0 (-) >0.05
rs520281 chr1:53365235 ECHDC2 C - 13 C vs. G 0.292 (G) 0.267 (C) <1 (-) 0 (-) >0.05
rs6588446 chr1:53425260 SCP2 C - 13 A vs. G 0.35 (A) 0.0 (G) >1 (-) 0 (-) >0.05
rs11585570 chr1:53438130 SCP2 C - 13 T vs. C 0.3 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs11206052 chr1:53426813 SCP2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7552096 chr1:53430577 SCP2 C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs12973550 chr1:53471025 SCP2 C - 13 A vs. C - - >1 (-) 7 (-) >0.05
rs11206060 chr1:53451840 SCP2 C - 12 T vs. C 0.442 (T) - >1 (-) 0 (-) >0.05
rs56020491 chr1:53348738 ZYG11A C - 13 A vs. G 0.025 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs10112808 chr1:53471357 SCP2 C - 13 A vs. G - - <1 (-) 7 (-) >0.05
rs1242315 chr1:53417181 SCP2 C - 13 A vs. G 0.35 (A) - >1 (-) 1 (-) >0.05
rs1242317 chr1:53414766 SCP2 C - 13 T vs. C 0.35 (T) - >1 (-) 2 (-) >0.05
rs1288362 chr1:53513437 SCP2 C - 12 T vs. C 0.367 (C) 0.292 (C) >1 (-) 0 (-) >0.05
rs6588445 chr1:53424928 SCP2 C - 13 T vs. C 0.35 (C) - <1 (-) 0 (-) >0.05
rs78246083 chr1:53489169 SCP2 C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs1242326 chr1:53399104 SCP2 C - 13 A vs. C 0.35 (C) - <1 (-) 1 (-) >0.05
rs1149800 chr1:53372594 ECHDC2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12046611 chr1:53398727 SCP2 C - 10 T vs. C - 0.25 (C) >1 (-) 50 (-) >0.05
rs1242328 chr1:53396869 SCP2 C - 13 A vs. G 0.367 (A) - >1 (-) 3 (-) >0.05
rs2897561 chr1:53388747 ECHDC2 C - 13 A vs. C 0.35 (C) - <1 (-) 5 (-) >0.05
rs11206055 chr1:53436632 SCP2 C - 13 A vs. T 0.3 (T) 0.275 (A) <1 (-) 0 (-) >0.05
rs9888728 chr1:53471493 SCP2 C - 13 T vs. C - - <1 (-) 48 (-) >0.05
rs11206056 chr1:53444836 SCP2 C - 13 T vs. C 0.275 (C) 0.258 (T) <1 (-) 0 (-) >0.05
rs479569 chr1:53352407 ZYG11A C - 13 T vs. C 0.35 (C) - <1 (-) 0 (-) >0.05
rs10888759 chr1:53433274 SCP2 C - 13 A vs. G 0.35 (G) 0.0 (A) <1 (-) 1 (-) >0.05
rs495985 chr1:53364049 ECHDC2 C - 13 T vs. C - - <1 (-) 12 (-) >0.05
rs9934692 chr1:53471385 SCP2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12037492 chr1:53440816 SCP2 C - 13 T vs. G 0.292 (T) 0.25 (G) >1 (-) 0 (-) >0.05
rs567880 chr1:53348564 ZYG11A C - 13 T vs. G 0.3 (T) 0.267 (G) >1 (-) 6 (-) >0.05
rs144405046 chr1:53448363 SCP2 C - 9 T vs. C - - >1 (-) 4 (-) >0.05
rs4584343 chr1:53434539 SCP2 C - 13 A vs. C 0.35 (C) - <1 (-) 1 (-) >0.05
rs481440 chr1:53344976 ZYG11A C - 13 T vs. C 0.325 (C) 0.267 (T) <1 (-) 6 (-) >0.05
rs501006 chr1:53368292 ECHDC2 C - 13 A vs. T 0.35 (T) - <1 (-) 0 (-) >0.05
rs1263452 chr1:53369497 ECHDC2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs512723 chr1:53343880 ZYG11A C - 13 A vs. G 0.35 (A) - >1 (-) 11 (-) >0.05
rs499195 chr1:53344907 ZYG11A C - 13 T vs. C 0.35 (C) - <1 (-) 11 (-) >0.05
rs12089511 chr1:53436427 SCP2 C - 13 A vs. T 0.333 (T) - <1 (-) 0 (-) >0.05
rs12972297 chr1:53471182 SCP2 C - 13 C vs. G - - >1 (-) 13 (-) >0.05

Association studies for this region [+]