SEMA4A, chr1:156117157-156147543 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs71630614 chr1:156072217 LMNA All: C 108,990 15 T vs. C 0.017 (T) - 1.48 (1.33-1.65) 0 (0-25) 2.39e-13
Meta_image?name=rs71630614

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs71630614 chr1:156072217 LMNA All: C 108,990 15 T vs. C 0.017 (T) - 1.48 (1.33-1.65) 0 (0-25) 2.39e-13
rs35643925 chr1:156154860 SEMA4A [+7317bp] C - 9 A vs. G - - >1 (-) 16 (-) <1.00e-06
rs114417629 chr1:156158777 SLC25A44 [-5103bp] All: C 108,990 15 A vs. G 0.2 (A) - 0.91 (0.86-0.96) 13 (0-51) 5.26e-04
rs76719272 chr1:156129796 SEMA4A All: C 108,990 15 T vs. C 0.15 (T) - 0.92 (0.87-0.97) 0 (0-40) 0.001
rs41265019 chr1:156146689 SEMA4A C - 6 A vs. G 0.017 (A) - <1 (-) 0 (-) <0.05
rs12756315 chr1:156160266 SLC25A44 [-3614bp] C - 4 T vs. G 0.042 (T) - >1 (-) 0 (-) <0.05
rs2842868 chr1:156196407 PMF1-BGLAP C - 13 T vs. G 0.342 (G) 0.033 (G) >1 (-) 18 (-) <0.05
rs2540171 chr1:156195682 PMF1-BGLAP C - 13 A vs. G - - <1 (-) 18 (-) <0.05
rs909269 chr1:156192028 PMF1-BGLAP C - 13 T vs. C 0.333 (T) 0.033 (T) <1 (-) 16 (-) <0.05
rs2247476 chr1:156190280 PMF1-BGLAP C - 13 A vs. C 0.342 (A) 0.033 (A) <1 (-) 20 (-) >0.05
rs2075163 chr1:156181833 SLC25A44 C - 3 T vs. G 0.008 (G) 0.292 (G) <1 (-) 0 (-) >0.05
rs7534339 chr1:156156219 SLC25A44 [-7661bp] C - 13 T vs. C 0.333 (C) 0.033 (C) >1 (-) 25 (-) >0.05
rs112223391 chr1:156156094 SLC25A44 [-7786bp] C - 13 A vs. G 0.317 (A) 0.033 (A) <1 (-) 26 (-) >0.05
rs2006302 chr1:156192351 PMF1-BGLAP C - 13 T vs. G - - <1 (-) 24 (-) >0.05
rs57056972 chr1:156159064 SLC25A44 [-4816bp] C - 13 A vs. C 0.333 (A) 0.033 (A) <1 (-) 28 (-) >0.05
rs55910626 chr1:156159909 SLC25A44 [-3971bp] C - 13 C vs. G 0.333 (G) 0.033 (G) >1 (-) 28 (-) >0.05
rs10159384 chr1:156160822 SLC25A44 [-3058bp] C - 13 T vs. C 0.333 (T) 0.033 (T) <1 (-) 28 (-) >0.05
rs41265025 chr1:156163906 SLC25A44 C - 13 T vs. C 0.342 (T) 0.033 (T) <1 (-) 27 (-) >0.05
rs6427304 chr1:156156789 SLC25A44 [-7091bp] C - 13 A vs. G 0.392 (G) 0.125 (G) >1 (-) 0 (-) >0.05
rs11587860 chr1:156156951 SLC25A44 [-6929bp] C - 13 C vs. G 0.392 (C) 0.058 (C) <1 (-) 0 (-) >0.05
rs61462713 chr1:156161682 SLC25A44 [-2198bp] C - 13 T vs. C 0.325 (T) 0.033 (T) <1 (-) 28 (-) >0.05
rs2241109 chr1:156173082 SLC25A44 C - 13 T vs. C 0.333 (T) 0.033 (T) <1 (-) 29 (-) >0.05
rs2736607 chr1:156174930 SLC25A44 C - 13 T vs. G - - <1 (-) 28 (-) >0.05
rs55675376 chr1:156165881 SLC25A44 C - 13 T vs. C 0.333 (T) 0.033 (T) <1 (-) 29 (-) >0.05
rs2241108 chr1:156181007 SLC25A44 C - 13 C vs. G 0.4 (G) 0.142 (G) >1 (-) 0 (-) >0.05
rs6669212 chr1:156110313 LMNA [+433bp] C - 13 A vs. G 0.183 (A) - <1 (-) 0 (-) >0.05
rs1468772 chr1:156116488 SEMA4A [-669bp] C - 13 T vs. G 0.275 (G) 0.142 (G) <1 (-) 0 (-) >0.05
rs2072499 chr1:156169610 SLC25A44 C - 13 A vs. G 0.4 (G) 0.133 (G) >1 (-) 0 (-) >0.05
rs2853643 chr1:156184831 PMF1-BGLAP C - 13 A vs. G 0.392 (A) 0.142 (A) <1 (-) 0 (-) >0.05
rs2253809 chr1:156172125 SLC25A44 C - 13 T vs. C 0.4 (C) 0.133 (C) >1 (-) 0 (-) >0.05
rs2248074 chr1:156195888 PMF1-BGLAP C - 13 T vs. C - - <1 (-) 5 (-) >0.05
rs2736613 chr1:156196016 PMF1-BGLAP C - 13 T vs. C 0.383 (C) 0.15 (C) >1 (-) 5 (-) >0.05
rs11584621 chr1:156083051 LMNA C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs2842864 chr1:156159217 SLC25A44 [-4663bp] C - 13 A vs. G 0.392 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs2853641 chr1:156181770 SLC25A44 C - 13 A vs. G 0.392 (G) 0.142 (G) >1 (-) 0 (-) >0.05
rs2758616 chr1:156160358 SLC25A44 [-3522bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2241107 chr1:156182710 PMF1-BGLAP [-63bp] C - 13 T vs. C 0.4 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs2266514 chr1:156173685 SLC25A44 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2984613 chr1:156197380 PMF1-BGLAP C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2758618 chr1:156160892 SLC25A44 [-2988bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2540175 chr1:156184747 PMF1-BGLAP C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2758600 chr1:156195205 PMF1-BGLAP C - 13 T vs. C 0.367 (T) 0.092 (T) <1 (-) 1 (-) >0.05
rs2758615 chr1:156158367 SLC25A44 [-5513bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2540173 chr1:156188214 PMF1-BGLAP C - 13 A vs. G 0.4 (G) 0.142 (G) >1 (-) 0 (-) >0.05
rs11264449 chr1:156135241 SEMA4A C - 13 C vs. G 0.325 (C) 0.175 (C) >1 (-) 17 (-) >0.05
rs6427307 chr1:156190083 PMF1-BGLAP C - 13 A vs. G 0.392 (G) - >1 (-) 0 (-) >0.05
rs2842869 chr1:156160696 SLC25A44 [-3184bp] C - 13 A vs. G 0.392 (G) 0.108 (G) >1 (-) 0 (-) >0.05
rs11588323 chr1:156129334 SEMA4A C - 13 T vs. C 0.308 (T) 0.167 (T) >1 (-) 19 (-) >0.05
rs510441 chr1:156129968 SEMA4A C - 13 A vs. G 0.258 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs887953 chr1:156191149 PMF1-BGLAP C - 13 T vs. C 0.392 (C) 0.133 (C) >1 (-) 0 (-) >0.05

Association studies for this region [+]