SF3A2, chr19:2236520-2248678 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
Meta_image?name=rs117022814

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
chr19:2203555 chr19:2203555 DOT1L C - 9 T vs. G - - >1 (-) 22 (-) <0.05
rs145731586 chr19:2203551 DOT1L C - 9 T vs. C - - >1 (-) 22 (-) <0.05
rs74974755 chr19:2207701 DOT1L C - 5 A vs. T 0.025 (T) - <1 (-) 0 (-) <0.05
rs117734617 chr19:2193653 DOT1L C - 6 T vs. G 0.033 (T) - >1 (-) 0 (-) <0.05
rs73516526 chr19:2221430 DOT1L C - 11 T vs. G 0.025 (T) 0.242 (T) <1 (-) 17 (-) <0.05
rs2865074 chr19:2255819 JSRP1 C - 10 T vs. C 0.183 (T) 0.083 (T) >1 (-) 0 (-) <0.05
rs886363 chr19:2255336 JSRP1 C - 10 A vs. G 0.192 (A) 0.067 (A) >1 (-) 0 (-) <0.05
rs740404 chr19:2232049 DOT1L C - 11 A vs. G 0.1 (A) 0.2 (A) <1 (-) 0 (-) <0.05
rs7258448 chr19:2257230 JSRP1 C - 10 C vs. G 0.225 (G) 0.092 (G) <1 (-) 0 (-) <0.05
rs2523170 chr19:2268499 JSRP1 C - 11 A vs. T 0.242 (A) 0.1 (A) >1 (-) 0 (-) <0.05
rs117415965 chr19:2201327 DOT1L C - 5 A vs. G - 0.017 (A) <1 (-) 0 (-) <0.05
rs10409081 chr19:2257514 JSRP1 C - 11 T vs. C 0.192 (T) 0.075 (T) >1 (-) 0 (-) <0.05
rs58070120 chr19:2264497 JSRP1 C - 11 T vs. C 0.3 (T) 0.308 (C) >1 (-) 0 (-) <0.05
rs11672897 chr19:2214242 DOT1L C - 11 A vs. G 0.092 (A) - <1 (-) 0 (-) <0.05
rs2523168 chr19:2266821 JSRP1 C - 11 C vs. G 0.208 (G) 0.1 (G) <1 (-) 0 (-) <0.05
rs3746159 chr19:2210269 DOT1L C - 12 T vs. C 0.125 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs2523177 chr19:2274578 C19orf35 [-53bp] C - 11 T vs. C 0.217 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs2865077 chr19:2261021 JSRP1 C - 11 A vs. T - - <1 (-) 0 (-) >0.05
rs8113619 chr19:2263458 JSRP1 C - 11 A vs. T - - <1 (-) 0 (-) >0.05
rs2523169 chr19:2267939 JSRP1 C - 11 A vs. G 0.267 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs76569620 chr19:2200243 DOT1L C - 10 T vs. C 0.05 (T) - >1 (-) 12 (-) >0.05
rs2523175 chr19:2271323 OAZ1 C - 11 A vs. G 0.217 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs2523174 chr19:2271181 OAZ1 C - 11 T vs. C 0.217 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs2240128 chr19:2187276 DOT1L C - 12 T vs. C 0.117 (C) 0.233 (C) >1 (-) 0 (-) >0.05
rs62119668 chr19:2267526 JSRP1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs12974520 chr19:2262505 JSRP1 C - 11 A vs. T - - >1 (-) 0 (-) >0.05
rs76144544 chr19:2197068 DOT1L C - 11 T vs. C 0.025 (T) - >1 (-) 44 (-) >0.05
rs2074457 chr19:2271282 OAZ1 C - 11 T vs. C 0.233 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs10409063 chr19:2276710 C19orf35 C - 11 T vs. C 0.217 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs62119711 chr19:2296903 LINGO3 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs113640510 chr19:2221035 DOT1L C - 11 A vs. G - - >1 (-) 20 (-) >0.05
rs55855802 chr19:2265531 JSRP1 C - 11 T vs. C 0.333 (C) 0.4 (T) <1 (-) 0 (-) >0.05
rs2523173 chr19:2270634 OAZ1 C - 11 T vs. C 0.325 (C) 0.358 (T) <1 (-) 0 (-) >0.05
rs2074458 chr19:2271741 OAZ1 C - 11 A vs. G 0.342 (G) 0.342 (A) <1 (-) 0 (-) >0.05
rs12985777 chr19:2268055 JSRP1 C - 11 T vs. C 0.258 (T) 0.1 (T) >1 (-) 7 (-) >0.05
rs62119704 chr19:2267563 JSRP1 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs2250625 chr19:2270099 OAZ1 C - 11 T vs. C 0.342 (C) 0.333 (T) <1 (-) 0 (-) >0.05
rs3815146 chr19:2192015 DOT1L C - 12 T vs. C 0.367 (T) 0.233 (T) >1 (-) 0 (-) >0.05
rs2523167 chr19:2266434 JSRP1 C - 11 A vs. G 0.342 (G) 0.325 (A) <1 (-) 0 (-) >0.05
rs2854112 chr19:2273836 OAZ1 [+349bp] C - 11 T vs. C 0.35 (C) 0.367 (T) <1 (-) 0 (-) >0.05
rs2854109 chr19:2267198 JSRP1 C - 11 C vs. G 0.342 (C) 0.383 (G) >1 (-) 0 (-) >0.05
rs2854110 chr19:2269142 JSRP1 C - 11 A vs. G 0.267 (G) 0.092 (G) <1 (-) 5 (-) >0.05
rs2158263 chr19:2281997 C19orf35 C - 11 C vs. G 0.242 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs11668896 chr19:2278007 C19orf35 C - 10 T vs. C - - >1 (-) 15 (-) >0.05
rs11671102 chr19:2277987 C19orf35 C - 10 C vs. G - - >1 (-) 16 (-) >0.05
rs45521740 chr19:2245622 SF3A2 C - 10 A vs. G 0.05 (A) - >1 (-) 8 (-) >0.05
rs8112532 chr19:2218549 DOT1L C - 6 T vs. C - - >1 (-) 58 (-) >0.05
rs10418405 chr19:2296098 LINGO3 C - 11 C vs. G 0.192 (C) 0.108 (C) >1 (-) 4 (-) >0.05
rs12462019 chr19:2295984 LINGO3 C - 11 C vs. G 0.2 (G) 0.092 (G) <1 (-) 2 (-) >0.05

Association studies for this region [+]