SHC1, chr1:154934774-154946871 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs71628639 chr1:154988255 ZBTB7B All: C 99,075 12 C vs. A - - 0.59 (0.51-0.68) 0 (0-12) 1.62e-13
Meta_image?name=rs71628639

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs71628639 chr1:154988255 ZBTB7B All: C 99,075 12 C vs. A - - 0.59 (0.51-0.68) 0 (0-12) 1.62e-13
rs34195153 chr1:154913723 PBXIP1 [-2829bp] All: C 99,075 12 C vs. G - - 0.64 (0.55-0.75) 0 (0-32) 3.09e-08
rs114138760 chr1:154898185 PMVK All: C 105,041 14 C vs. G 0.017 (C) - 1.50 (1.27-1.77) 0 (0-24) 2.18e-06
rs41264253 chr1:154918352 PBXIP1 C - 13 A vs. G 0.083 (A) - <1 (-) 0 (-) <0.05
rs3766921 chr1:154935253 PYGO2 C - 13 C vs. G 0.008 (C) - >1 (-) 0 (-) <0.05
rs11585145 chr1:154947496 CKS1B C - 13 A vs. T 0.017 (T) - <1 (-) 0 (-) <0.05
rs1131397 chr1:154938235 SHC1 C - 13 C vs. G 0.017 (C) - >1 (-) 0 (-) <0.05
rs16836580 chr1:154945047 SHC1 C - 13 A vs. G 0.017 (A) - >1 (-) 0 (-) <0.05
rs8191979 chr1:154938662 SHC1 C - 13 T vs. C 0.017 (C) - <1 (-) 0 (-) <0.05
rs12076073 chr1:154944156 SHC1 C - 13 A vs. G 0.017 (G) - <1 (-) 0 (-) <0.05
rs2089247 chr1:154961448 FLAD1 C - 13 T vs. G 0.008 (G) - <1 (-) 0 (-) <0.05
rs2878517 chr1:154961458 FLAD1 C - 13 A vs. G 0.008 (G) - <1 (-) 0 (-) <0.05
rs7528060 chr1:154960019 FLAD1 C - 13 T vs. G 0.008 (G) - <1 (-) 0 (-) <0.05
rs2089248 chr1:154961706 FLAD1 C - 13 A vs. G 0.008 (G) - <1 (-) 0 (-) <0.05
rs59519769 chr1:154963662 FLAD1 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs7535144 chr1:154965113 FLAD1 C - 13 T vs. G - - >1 (-) 1 (-) <0.05
rs7525164 chr1:154968260 LENEP [+1469bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs11587981 chr1:154967952 LENEP [+1161bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs11590058 chr1:154956985 FLAD1 C - 13 T vs. C - - >1 (-) 1 (-) <0.05
rs28851228 chr1:154963946 FLAD1 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs6683093 chr1:154970510 LENEP [+3719bp] C - 13 C vs. G 0.008 (C) - >1 (-) 0 (-) <0.05
rs12075984 chr1:154943881 SHC1 C - 13 A vs. G 0.017 (G) - <1 (-) 0 (-) <0.05
rs6661212 chr1:154946696 SHC1 C - 13 A vs. C 0.017 (C) - <1 (-) 0 (-) <0.05
rs12096640 chr1:154958067 FLAD1 C - 13 T vs. C - - >1 (-) 3 (-) <0.05
rs111845926 chr1:154974920 ZBTB7B [-207bp] C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs113710565 chr1:154970972 ZBTB7B [-4155bp] C - 13 A vs. G 0.008 (G) - <1 (-) 0 (-) <0.05
rs113012729 chr1:154977113 ZBTB7B C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs11264293 chr1:154946517 SHC1 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs10908449 chr1:154955724 FLAD1 [-90bp] C - 13 T vs. C 0.017 (T) - >1 (-) 0 (-) <0.05
rs6696397 chr1:154956662 FLAD1 C - 13 A vs. C 0.008 (A) - >1 (-) 0 (-) <0.05
rs7525580 chr1:154959882 FLAD1 C - 13 A vs. G 0.008 (G) - <1 (-) 9 (-) <0.05
rs112344141 chr1:154983036 ZBTB7B C - 13 T vs. G 0.008 (G) - <1 (-) 0 (-) <0.05
rs147350405 chr1:154922599 PBXIP1 C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs6695407 chr1:154928707 PBXIP1 [+108bp] C - 13 A vs. G 0.017 (A) - >1 (-) 0 (-) <0.05
rs12142017 chr1:154980341 ZBTB7B C - 13 T vs. C 0.075 (C) - <1 (-) 12 (-) <0.05
rs7528548 chr1:154934665 PYGO2 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs11264294 chr1:154979561 ZBTB7B C - 13 T vs. C 0.075 (C) 0.058 (C) <1 (-) 17 (-) <0.05
rs77548871 chr1:154988533 ZBTB7B C - 13 C vs. G 0.025 (C) - <1 (-) 0 (-) <0.05
rs4845700 chr1:154981708 ZBTB7B C - 13 T vs. C 0.117 (C) 0.075 (C) <1 (-) 0 (-) <0.05
rs144819734 chr1:154986334 ZBTB7B C - 4 A vs. G - - >1 (-) 0 (-) <0.05
rs6673081 chr1:154989595 ZBTB7B C - 13 T vs. C 0.417 (T) 0.083 (T) <1 (-) 0 (-) <0.05
rs115973322 chr1:154886959 PMVK [-10251bp] C - 11 A vs. G 0.025 (A) - >1 (-) 1 (-) <0.05
rs75001385 chr1:154910729 PMVK [+1262bp] C - 10 T vs. C 0.025 (T) - >1 (-) 5 (-) <0.05
rs75276445 chr1:154900061 PMVK C - 10 T vs. G 0.025 (T) - >1 (-) 10 (-) >0.05
rs61811895 chr1:154976137 ZBTB7B C - 13 T vs. G 0.133 (T) - <1 (-) 0 (-) >0.05
rs4578216 chr1:154900721 PMVK C - 13 T vs. C 0.308 (C) 0.1 (C) >1 (-) 0 (-) >0.05
rs76664500 chr1:154899275 PMVK C - 11 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs116448674 chr1:154905310 PMVK C - 13 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs6696628 chr1:154906974 PMVK C - 13 T vs. C 0.05 (C) - <1 (-) 34 (-) >0.05
rs11799384 chr1:154906622 PMVK C - 13 C vs. G 0.033 (C) - >1 (-) 34 (-) >0.05

Association studies for this region [+]