SIPA1L2, chr1:232533711-232697304 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10797576 chr1:232664611 SIPA1L2 All: C 120,238 21 T vs. C 0.092 (T) 0.092 (T) 1.13 (1.09-1.18) 0 (0-41) 1.76e-10
Meta_image?name=rs10797576

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10797576 chr1:232664611 SIPA1L2 All: C 120,238 21 T vs. C 0.092 (T) 0.092 (T) 1.13 (1.09-1.18) 0 (0-41) 1.76e-10
rs2182431 chr1:232660040 SIPA1L2 All: C 108,990 15 G vs. A 0.108 (G) 0.1 (G) 1.14 (1.09-1.19) 0 (0-49) 1.38e-08
rs10910548 chr1:232658436 SIPA1L2 All: C 108,990 15 G vs. A 0.108 (G) 0.075 (G) 1.14 (1.09-1.20) 0 (0-48) 1.51e-08
rs3902818 chr1:232658704 SIPA1L2 All: C 108,990 15 A vs. G 0.108 (A) 0.1 (A) 1.14 (1.09-1.19) 0 (0-49) 1.55e-08
rs35186494 chr1:232657647 SIPA1L2 All: C 108,990 15 C vs. T 0.108 (C) 0.117 (C) 1.14 (1.09-1.19) 0 (0-47) 2.03e-08
rs11589828 chr1:232669272 SIPA1L2 All: C 108,990 15 A vs. T 0.108 (A) 0.117 (A) 1.14 (1.09-1.19) 0 (0-50) 2.11e-08
rs1326293 chr1:232669682 SIPA1L2 All: C 108,990 15 T vs. G 0.1 (T) 0.117 (T) 1.14 (1.09-1.19) 0 (0-48) 2.27e-08
rs10797575 chr1:232661229 SIPA1L2 All: C 108,990 15 T vs. C 0.183 (T) 0.4 (C) 1.10 (1.05-1.14) 30 (0-62) 5.21e-06
rs6656109 chr1:232665165 SIPA1L2 All: C 108,990 15 C vs. T 0.175 (C) 0.325 (T) 1.09 (1.05-1.14) 28 (0-61) 5.41e-06
rs7532227 chr1:232670146 SIPA1L2 All: C 108,990 15 A vs. G 0.183 (A) 0.35 (G) 1.09 (1.05-1.14) 27 (0-61) 5.93e-06
rs6424234 chr1:232670114 SIPA1L2 All: C 108,990 15 C vs. T 0.183 (C) 0.325 (T) 1.09 (1.05-1.14) 27 (0-61) 6.29e-06
rs7535469 chr1:232659827 SIPA1L2 All: C 108,990 15 T vs. C 0.183 (T) 0.342 (C) 1.09 (1.05-1.14) 30 (0-62) 7.67e-06
rs2357070 chr1:232658363 SIPA1L2 All: C 108,990 15 A vs. G 0.183 (A) 0.333 (G) 1.09 (1.05-1.14) 29 (0-62) 8.01e-06
rs34331262 chr1:232657733 SIPA1L2 C - 13 A vs. G 0.092 (G) 0.117 (G) <1 (-) 0 (-) <1.00e-04
rs16857578 chr1:232669231 SIPA1L2 C - 13 T vs. C 0.1 (T) 0.117 (T) >1 (-) 0 (-) <1.00e-04
rs12096229 chr1:232671405 SIPA1L2 C - 13 A vs. G 0.108 (G) 0.108 (G) <1 (-) 0 (-) <1.00e-04
rs12094095 chr1:232671213 SIPA1L2 C - 13 T vs. C 0.1 (T) 0.108 (T) >1 (-) 0 (-) <0.05
rs10910550 chr1:232672841 SIPA1L2 C - 13 C vs. G 0.108 (C) 0.1 (C) >1 (-) 0 (-) <0.05
rs6424233 chr1:232662866 SIPA1L2 C - 13 C vs. G 0.183 (C) 0.342 (G) >1 (-) 37 (-) <0.05
rs12073680 chr1:232644654 SIPA1L2 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs4649383 chr1:232650867 SIPA1L2 C - 13 T vs. C 0.183 (C) 0.317 (T) <1 (-) 37 (-) <0.05
rs1285676 chr1:232712430 SIPA1L2 [+15126bp] C - 13 T vs. C 0.45 (C) 0.183 (C) >1 (-) 0 (-) <0.05
rs10797578 chr1:232688592 SIPA1L2 C - 12 A vs. G 0.483 (A) 0.167 (A) <1 (-) 0 (-) <0.05
rs789663 chr1:232684827 SIPA1L2 C - 12 T vs. C 0.25 (T) 0.283 (T) >1 (-) 0 (-) <0.05
rs1285678 chr1:232712145 SIPA1L2 [+14841bp] C - 13 A vs. G 0.458 (A) 0.183 (A) <1 (-) 0 (-) <0.05
rs35424499 chr1:232671890 SIPA1L2 C - 13 A vs. G 0.108 (A) - >1 (-) 10 (-) <0.05
rs12563843 chr1:232621995 SIPA1L2 C - 9 C vs. G - 0.317 (C) <1 (-) 21 (-) <0.05
rs1285677 chr1:232712355 SIPA1L2 [+15051bp] C - 13 A vs. C 0.458 (A) 0.183 (A) <1 (-) 0 (-) <0.05
rs2781795 chr1:232708903 SIPA1L2 [+11599bp] C - 13 A vs. G 0.45 (A) 0.183 (A) <1 (-) 0 (-) <0.05
rs789642 chr1:232680293 SIPA1L2 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs17191717 chr1:232718893 SIPA1L2 [+21589bp] C - 10 A vs. G 0.008 (A) - >1 (-) 0 (-) <0.05
rs789644 chr1:232681110 SIPA1L2 C - 12 A vs. C 0.458 (C) 0.383 (C) <1 (-) 0 (-) <0.05
rs789660 chr1:232699536 SIPA1L2 [+2232bp] C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs789639 chr1:232679781 SIPA1L2 C - 12 A vs. G 0.225 (A) 0.358 (A) >1 (-) 0 (-) <0.05
rs2247738 chr1:232701190 SIPA1L2 [+3886bp] C - 13 A vs. C 0.442 (A) 0.167 (A) <1 (-) 0 (-) <0.05
rs1334406 chr1:232687963 SIPA1L2 C - 12 C vs. G 0.292 (G) 0.217 (C) <1 (-) 0 (-) <0.05
rs16857401 chr1:232620920 SIPA1L2 C - 9 A vs. C - 0.317 (A) <1 (-) 31 (-) <0.05
rs2478158 chr1:232690698 SIPA1L2 C - 13 A vs. G 0.417 (A) 0.167 (A) <1 (-) 0 (-) <0.05
rs2243857 chr1:232690086 SIPA1L2 C - 13 A vs. G 0.425 (A) 0.158 (A) <1 (-) 0 (-) <0.05
rs2025725 chr1:232711569 SIPA1L2 [+14265bp] C - 13 A vs. G 0.467 (G) 0.183 (G) >1 (-) 0 (-) <0.05
rs1285679 chr1:232711884 SIPA1L2 [+14580bp] C - 13 A vs. C 0.458 (A) 0.183 (A) <1 (-) 0 (-) <0.05
rs789661 chr1:232684139 SIPA1L2 C - 12 T vs. C 0.483 (T) 0.133 (T) <1 (-) 0 (-) <0.05
rs789662 chr1:232684801 SIPA1L2 C - 12 T vs. C 0.483 (C) 0.142 (C) >1 (-) 0 (-) <0.05
rs789664 chr1:232684859 SIPA1L2 C - 12 T vs. C 0.492 (T) 0.142 (T) <1 (-) 0 (-) <0.05
rs2483845 chr1:232690796 SIPA1L2 C - 13 T vs. G 0.417 (T) 0.158 (T) <1 (-) 0 (-) <0.05
rs796876 chr1:232692908 SIPA1L2 C - 13 T vs. G 0.425 (T) 0.167 (T) <1 (-) 0 (-) <0.05
rs2254220 chr1:232683525 SIPA1L2 C - 12 T vs. G 0.475 (G) 0.25 (G) >1 (-) 0 (-) <0.05
rs3855981 chr1:232683603 SIPA1L2 C - 12 A vs. G 0.45 (G) 0.292 (G) <1 (-) 0 (-) <0.05
rs12049047 chr1:232611486 SIPA1L2 C - 9 T vs. G - 0.325 (G) >1 (-) 33 (-) <0.05
rs12022648 chr1:232610426 SIPA1L2 C - 9 C vs. G - 0.325 (C) <1 (-) 33 (-) <0.05

Association studies for this region [+]