SIPA1L2, chr1:232533711-232697304 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10797576 chr1:232664611 SIPA1L2 All: C 120,238 21 T vs. C 0.092 (T) 0.092 (T) 1.13 (1.09-1.18) 0 (0-41) 1.76e-10
Meta_image?name=rs10797576

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs653428 chr1:232485615 SIPA1L2 [-48096bp] C - 13 A vs. G 0.433 (A) 0.142 (A) <1 (-) 0 (-) >0.05
rs16856913 chr1:232511114 SIPA1L2 [-22597bp] C - 13 A vs. T 0.225 (T) - <1 (-) 0 (-) >0.05
rs10910564 chr1:232729786 SIPA1L2 [+32482bp] C - 13 T vs. C 0.192 (T) - >1 (-) 10 (-) >0.05
rs61826621 chr1:232731221 SIPA1L2 [+33917bp] C - 13 C vs. G 0.192 (G) - <1 (-) 11 (-) >0.05
rs114398385 chr1:232522151 SIPA1L2 [-11560bp] C - 13 C vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs16856905 chr1:232499790 SIPA1L2 [-33921bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs145513766 chr1:232568268 SIPA1L2 C - 7 T vs. C - - <1 (-) 29 (-) >0.05
rs12038451 chr1:232535253 SIPA1L2 C - 13 T vs. G 0.033 (T) 0.342 (G) <1 (-) 15 (-) >0.05
rs10910563 chr1:232729499 SIPA1L2 [+32195bp] C - 13 A vs. T 0.192 (A) - >1 (-) 0 (-) >0.05
rs114437490 chr1:232553661 SIPA1L2 C - 10 A vs. C 0.033 (A) - <1 (-) 12 (-) >0.05
rs600379 chr1:232533015 SIPA1L2 [-696bp] C - 13 T vs. C 0.467 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs28408298 chr1:232510730 SIPA1L2 [-22981bp] C - 13 A vs. G 0.225 (A) - >1 (-) 0 (-) >0.05
rs78668762 chr1:232623746 SIPA1L2 C - 6 A vs. C - - <1 (-) 0 (-) >0.05
rs114942419 chr1:232588130 SIPA1L2 C - 3 T vs. C 0.008 (T) - <1 (-) 64 (-) >0.05
rs55860225 chr1:232728968 SIPA1L2 [+31664bp] C - 13 T vs. C 0.175 (T) - >1 (-) 5 (-) >0.05
rs73109039 chr1:232504811 SIPA1L2 [-28900bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs57043857 chr1:232728970 SIPA1L2 [+31666bp] C - 13 T vs. C 0.192 (T) - >1 (-) 5 (-) >0.05
rs12036020 chr1:232576998 SIPA1L2 C - 11 A vs. T - 0.367 (T) <1 (-) 0 (-) >0.05
rs60568186 chr1:232735373 SIPA1L2 [+38069bp] C - 13 C vs. G 0.183 (G) - <1 (-) 16 (-) >0.05
rs789372 chr1:232524691 SIPA1L2 [-9020bp] C - 13 A vs. C 0.25 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs10495331 chr1:232733031 SIPA1L2 [+35727bp] C - 11 T vs. C - 0.083 (T) >1 (-) 0 (-) >0.05
rs9286796 chr1:232486393 SIPA1L2 [-47318bp] C - 13 A vs. G 0.433 (G) 0.125 (G) >1 (-) 0 (-) >0.05
rs12032811 chr1:232563625 SIPA1L2 C - 9 T vs. C 0.008 (C) 0.492 (T) <1 (-) 49 (-) >0.05
rs4649340 chr1:232499411 SIPA1L2 [-34300bp] C - 13 A vs. G - - >1 (-) 33 (-) >0.05
rs115218394 chr1:232650297 SIPA1L2 C - 8 A vs. G 0.008 (G) - >1 (-) 9 (-) >0.05
rs74832736 chr1:232522484 SIPA1L2 [-11227bp] C - 11 A vs. G 0.067 (A) - >1 (-) 12 (-) >0.05
rs12729264 chr1:232638336 SIPA1L2 C - 12 T vs. C 0.125 (T) - <1 (-) 0 (-) >0.05
rs145444749 chr1:232553833 SIPA1L2 C - 9 C vs. G - - <1 (-) 19 (-) >0.05
rs17176717 chr1:232526512 SIPA1L2 [-7199bp] C - 13 T vs. C 0.05 (C) - <1 (-) 0 (-) >0.05
rs16857060 chr1:232557568 SIPA1L2 C - 9 A vs. G - 0.483 (G) >1 (-) 50 (-) >0.05
rs12026666 chr1:232557273 SIPA1L2 C - 9 T vs. G - 0.483 (T) <1 (-) 50 (-) >0.05
rs75620243 chr1:232488451 SIPA1L2 [-45260bp] C - 13 A vs. G 0.017 (A) 0.017 (A) >1 (-) 19 (-) >0.05
rs6424232 chr1:232661057 SIPA1L2 C - 13 T vs. C - - >1 (-) 16 (-) >0.05
rs12049615 chr1:232556894 SIPA1L2 C - 9 A vs. G - 0.483 (G) >1 (-) 50 (-) >0.05
rs61823568 chr1:232545228 SIPA1L2 C - 13 A vs. G 0.25 (A) - >1 (-) 0 (-) >0.05
rs146355484 chr1:232574968 SIPA1L2 C - 7 C vs. G - - >1 (-) 27 (-) >0.05
rs11579669 chr1:232631259 SIPA1L2 C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs6698163 chr1:232640156 SIPA1L2 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs56728321 chr1:232555389 SIPA1L2 C - 9 T vs. C - 0.475 (C) >1 (-) 53 (-) >0.05
rs146877787 chr1:232569840 SIPA1L2 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs4649385 chr1:232706071 SIPA1L2 [+8767bp] C - 12 A vs. G 0.017 (A) 0.45 (G) >1 (-) 0 (-) >0.05
rs75626602 chr1:232569624 SIPA1L2 C - 7 T vs. C - 0.492 (T) <1 (-) 42 (-) >0.05
rs9793737 chr1:232744032 SIPA1L2 [+46728bp] C - 13 A vs. G - 0.275 (G) >1 (-) 0 (-) >0.05
rs10797579 chr1:232718667 SIPA1L2 [+21363bp] C - 13 T vs. G 0.25 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs612191 chr1:232522748 SIPA1L2 [-10963bp] C - 13 T vs. C 0.25 (C) 0.158 (C) >1 (-) 0 (-) >0.05
rs701168 chr1:232525420 SIPA1L2 [-8291bp] C - 13 A vs. C 0.292 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs6669599 chr1:232732077 SIPA1L2 [+34773bp] C - 13 T vs. G 0.433 (G) 0.15 (G) <1 (-) 5 (-) >0.05
rs35606933 chr1:232512039 SIPA1L2 [-21672bp] C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs16856917 chr1:232519126 SIPA1L2 [-14585bp] C - 13 A vs. T - 0.408 (T) <1 (-) 18 (-) >0.05
rs10910544 chr1:232635414 SIPA1L2 C - 13 T vs. C 0.242 (T) 0.2 (C) <1 (-) 10 (-) >0.05

Association studies for this region [+]