SIPA1L2, chr1:232533711-232697304 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10797576 chr1:232664611 SIPA1L2 All: C 120,238 21 T vs. C 0.092 (T) 0.092 (T) 1.13 (1.09-1.18) 0 (0-41) 1.76e-10
Meta_image?name=rs10797576

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3855979 chr1:232658615 SIPA1L2 C - 13 A vs. C 0.1 (C) 0.45 (A) <1 (-) 12 (-) >0.05
rs12757122 chr1:232742424 SIPA1L2 [+45120bp] C - 7 A vs. G 0.042 (G) - >1 (-) 0 (-) >0.05
rs9725979 chr1:232486956 SIPA1L2 [-46755bp] C - 13 T vs. C 0.292 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs6704288 chr1:232648020 SIPA1L2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs1890315 chr1:232549986 SIPA1L2 C - 13 T vs. C 0.05 (T) - >1 (-) 13 (-) >0.05
rs12753793 chr1:232657870 SIPA1L2 C - 13 T vs. C 0.075 (T) 0.45 (C) >1 (-) 10 (-) >0.05
rs78328845 chr1:232669781 SIPA1L2 C - 9 A vs. G 0.075 (G) - <1 (-) 0 (-) >0.05
rs78103748 chr1:232500254 SIPA1L2 [-33457bp] C - 13 T vs. C 0.042 (T) 0.125 (T) >1 (-) 38 (-) >0.05
rs6697289 chr1:232740980 SIPA1L2 [+43676bp] C - 13 A vs. G 0.233 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs34040538 chr1:232521872 SIPA1L2 [-11839bp] C - 13 T vs. C 0.108 (T) 0.067 (T) >1 (-) 15 (-) >0.05
rs150373079 chr1:232687865 SIPA1L2 C - 11 T vs. C - - <1 (-) 3 (-) >0.05
rs9660150 chr1:232485906 SIPA1L2 [-47805bp] C - 13 T vs. C 0.292 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs12406825 chr1:232507815 SIPA1L2 [-25896bp] C - 13 A vs. T 0.125 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs116074465 chr1:232732030 SIPA1L2 [+34726bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs56046057 chr1:232610515 SIPA1L2 C - 9 T vs. C - - >1 (-) 15 (-) >0.05
rs6704442 chr1:232664903 SIPA1L2 C - 13 T vs. C 0.075 (C) 0.433 (T) <1 (-) 18 (-) >0.05
rs17176514 chr1:232519256 SIPA1L2 [-14455bp] C - 13 T vs. G 0.158 (T) - >1 (-) 0 (-) >0.05
rs12035516 chr1:232572495 SIPA1L2 C - 7 A vs. G - 0.492 (A) <1 (-) 20 (-) >0.05
rs201425756 chr1:232527862 SIPA1L2 [-5849bp] C - 13 A vs. C - - >1 (-) 23 (-) >0.05
rs140542268 chr1:232603019 SIPA1L2 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs148471932 chr1:232563865 SIPA1L2 C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs144344181 chr1:232564403 SIPA1L2 C - 10 A vs. C - - <1 (-) 0 (-) >0.05
rs77494367 chr1:232501218 SIPA1L2 [-32493bp] C - 13 A vs. G 0.042 (A) 0.15 (A) >1 (-) 38 (-) >0.05
rs2485908 chr1:232527718 SIPA1L2 [-5993bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11586377 chr1:232657595 SIPA1L2 C - 12 T vs. C 0.192 (C) - <1 (-) 0 (-) >0.05
rs16857655 chr1:232694188 SIPA1L2 C - 13 T vs. G - 0.45 (G) >1 (-) 21 (-) >0.05
rs12567012 chr1:232522227 SIPA1L2 [-11484bp] C - 13 T vs. G - 0.475 (T) <1 (-) 22 (-) >0.05
rs3855982 chr1:232719431 SIPA1L2 [+22127bp] C - 13 T vs. C 0.25 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs142069210 chr1:232598767 SIPA1L2 C - 9 C vs. G - - >1 (-) 0 (-) >0.05
rs6682050 chr1:232569943 SIPA1L2 C - 13 T vs. C 0.342 (C) 0.125 (C) <1 (-) 0 (-) >0.05
rs2486022 chr1:232527958 SIPA1L2 [-5753bp] C - 13 A vs. C 0.325 (A) 0.267 (C) >1 (-) 0 (-) >0.05
rs9661059 chr1:232489410 SIPA1L2 [-44301bp] C - 13 T vs. C 0.108 (C) 0.408 (T) <1 (-) 0 (-) >0.05
rs16857696 chr1:232704719 SIPA1L2 [+7415bp] C - 13 T vs. G 0.025 (G) 0.45 (T) <1 (-) 20 (-) >0.05
rs4233063 chr1:232597629 SIPA1L2 C - 12 T vs. C - 0.35 (C) <1 (-) 0 (-) >0.05
rs138183717 chr1:232610289 SIPA1L2 C - 8 T vs. G - - <1 (-) 0 (-) >0.05
rs61823627 chr1:232637725 SIPA1L2 C - 8 T vs. C 0.0 (T) - <1 (-) 0 (-) >0.05
rs57590095 chr1:232703837 SIPA1L2 [+6533bp] C - 13 A vs. T 0.025 (A) 0.45 (T) >1 (-) 20 (-) >0.05
rs61823570 chr1:232564884 SIPA1L2 C - 13 C vs. G 0.217 (C) - <1 (-) 0 (-) >0.05
rs59640110 chr1:232507693 SIPA1L2 [-26018bp] C - 13 T vs. G 0.075 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs12403223 chr1:232698144 SIPA1L2 [+840bp] C - 13 A vs. G 0.025 (A) 0.45 (G) >1 (-) 22 (-) >0.05
rs16856846 chr1:232485096 SIPA1L2 [-48615bp] C - 9 A vs. T - 0.45 (T) <1 (-) 0 (-) >0.05
rs10458346 chr1:232647636 SIPA1L2 C - 13 A vs. C - - <1 (-) 12 (-) >0.05
rs79512033 chr1:232532547 SIPA1L2 [-1164bp] C - 6 T vs. C 0.017 (C) - <1 (-) 49 (-) >0.05
rs149653989 chr1:232595497 SIPA1L2 C - 5 A vs. G - - >1 (-) 19 (-) >0.05
rs57063260 chr1:232584462 SIPA1L2 C - 11 A vs. G - 0.125 (A) >1 (-) 0 (-) >0.05
rs3855980 chr1:232683512 SIPA1L2 C - 12 T vs. C 0.275 (C) 0.475 (C) <1 (-) 24 (-) >0.05
rs2025726 chr1:232653734 SIPA1L2 C - 13 A vs. G 0.075 (G) 0.45 (A) <1 (-) 15 (-) >0.05
rs1547741 chr1:232568293 SIPA1L2 C - 11 A vs. G 0.158 (A) 0.0 (A) <1 (-) 28 (-) >0.05
rs142169857 chr1:232572894 SIPA1L2 C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs12034145 chr1:232572461 SIPA1L2 C - 7 T vs. C - 0.492 (C) >1 (-) 11 (-) >0.05

Association studies for this region [+]