SIPA1L2, chr1:232533711-232697304 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10797576 chr1:232664611 SIPA1L2 All: C 120,238 21 T vs. C 0.092 (T) 0.092 (T) 1.13 (1.09-1.18) 0 (0-41) 1.76e-10
Meta_image?name=rs10797576

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs789647 chr1:232703563 SIPA1L2 [+6259bp] C - 12 A vs. G 0.008 (A) - >1 (-) 11 (-) <0.05
rs2247728 chr1:232700772 SIPA1L2 [+3468bp] C - 12 T vs. C 0.008 (T) - >1 (-) 7 (-) <0.05
rs1285683 chr1:232710264 SIPA1L2 [+12960bp] C - 13 A vs. C 0.333 (C) 0.392 (A) <1 (-) 13 (-) <0.05
rs1285682 chr1:232710367 SIPA1L2 [+13063bp] C - 13 A vs. G 0.333 (G) 0.392 (A) <1 (-) 13 (-) <0.05
rs1285681 chr1:232710853 SIPA1L2 [+13549bp] C - 13 T vs. G 0.333 (G) 0.4 (T) <1 (-) 13 (-) <0.05
rs60555755 chr1:232635443 SIPA1L2 C - 9 T vs. C - 0.333 (C) >1 (-) 0 (-) <0.05
rs140560627 chr1:232525297 SIPA1L2 [-8414bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs80044371 chr1:232687468 SIPA1L2 C - 13 C vs. G 0.008 (G) - <1 (-) 0 (-) <0.05
rs17176234 chr1:232507635 SIPA1L2 [-26076bp] C - 12 A vs. G 0.083 (G) - >1 (-) 5 (-) <0.05
rs2247723 chr1:232700641 SIPA1L2 [+3337bp] C - 13 A vs. G - - >1 (-) 36 (-) <0.05
rs72755387 chr1:232526392 SIPA1L2 [-7319bp] C - 13 C vs. G 0.042 (C) 0.033 (C) >1 (-) 0 (-) <0.05
rs622468 chr1:232508176 SIPA1L2 [-25535bp] C - 13 T vs. C 0.292 (C) 0.15 (C) <1 (-) 0 (-) <0.05
rs72755381 chr1:232522866 SIPA1L2 [-10845bp] C - 13 T vs. C 0.042 (C) 0.008 (C) <1 (-) 0 (-) <0.05
rs111360975 chr1:232521749 SIPA1L2 [-11962bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs145871828 chr1:232527618 SIPA1L2 [-6093bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs58754214 chr1:232722662 SIPA1L2 [+25358bp] C - 12 A vs. T - 0.075 (A) >1 (-) 0 (-) <0.05
rs7543758 chr1:232709032 SIPA1L2 [+11728bp] C - 12 A vs. G - - <1 (-) 11 (-) <0.05
rs72632852 chr1:232521512 SIPA1L2 [-12199bp] C - 10 A vs. G - - >1 (-) 0 (-) <0.05
rs1285672 chr1:232715237 SIPA1L2 [+17933bp] C - 13 A vs. T 0.483 (T) 0.183 (A) <1 (-) 0 (-) <0.05
rs7546863 chr1:232739491 SIPA1L2 [+42187bp] C - 13 T vs. C 0.117 (C) 0.058 (C) >1 (-) 1 (-) <0.05
rs145177302 chr1:232499888 SIPA1L2 [-33823bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs142354682 chr1:232699786 SIPA1L2 [+2482bp] C - 13 T vs. C - - <1 (-) 33 (-) >0.05
rs3120767 chr1:232510005 SIPA1L2 [-23706bp] C - 13 A vs. C 0.3 (C) 0.15 (C) <1 (-) 0 (-) >0.05
rs943140 chr1:232675032 SIPA1L2 C - 13 T vs. G 0.117 (T) 0.25 (T) >1 (-) 0 (-) >0.05
rs622465 chr1:232508183 SIPA1L2 [-25528bp] C - 13 A vs. C 0.292 (A) 0.15 (A) >1 (-) 0 (-) >0.05
rs607869 chr1:232484231 SIPA1L2 [-49480bp] C - 13 A vs. T 0.258 (A) 0.225 (A) >1 (-) 0 (-) >0.05
rs12723021 chr1:232677738 SIPA1L2 C - 13 A vs. G 0.05 (G) - <1 (-) 41 (-) >0.05
rs145027424 chr1:232489426 SIPA1L2 [-44285bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs3120768 chr1:232512873 SIPA1L2 [-20838bp] C - 13 A vs. G 0.292 (G) 0.15 (G) <1 (-) 0 (-) >0.05
rs16857069 chr1:232567489 SIPA1L2 C - 7 T vs. C - 0.5 (C) <1 (-) 42 (-) >0.05
rs7523501 chr1:232734151 SIPA1L2 [+36847bp] C - 13 C vs. G 0.117 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs10910551 chr1:232675605 SIPA1L2 C - 12 T vs. C 0.117 (T) 0.233 (T) >1 (-) 0 (-) >0.05
rs16857511 chr1:232651485 SIPA1L2 C - 4 T vs. C - - <1 (-) 0 (-) >0.05
rs7535595 chr1:232504681 SIPA1L2 [-29030bp] C - 13 T vs. G 0.3 (T) 0.183 (T) <1 (-) 21 (-) >0.05
rs12752619 chr1:232733372 SIPA1L2 [+36068bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs593935 chr1:232484994 SIPA1L2 [-48717bp] C - 13 A vs. T 0.233 (A) 0.158 (A) >1 (-) 0 (-) >0.05
rs9424427 chr1:232486245 SIPA1L2 [-47466bp] C - 13 A vs. C 0.233 (C) 0.167 (C) <1 (-) 0 (-) >0.05
rs143410049 chr1:232523601 SIPA1L2 [-10110bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs7543873 chr1:232679041 SIPA1L2 C - 12 A vs. G 0.292 (A) 0.167 (G) >1 (-) 0 (-) >0.05
rs592522 chr1:232485359 SIPA1L2 [-48352bp] C - 13 A vs. G 0.233 (G) 0.15 (G) <1 (-) 0 (-) >0.05
rs12730108 chr1:232696714 SIPA1L2 C - 13 A vs. G 0.3 (G) - <1 (-) 40 (-) >0.05
rs61823599 chr1:232610345 SIPA1L2 C - 13 C vs. G 0.2 (G) 0.067 (G) <1 (-) 0 (-) >0.05
rs17781131 chr1:232529402 SIPA1L2 [-4309bp] C - 13 C vs. G 0.083 (C) - <1 (-) 0 (-) >0.05
rs3120766 chr1:232507112 SIPA1L2 [-26599bp] C - 13 A vs. G 0.292 (A) 0.175 (A) <1 (-) 18 (-) >0.05
rs10910552 chr1:232675722 SIPA1L2 C - 12 A vs. G 0.117 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs789636 chr1:232676968 SIPA1L2 C - 12 A vs. G 0.333 (G) 0.092 (G) <1 (-) 0 (-) >0.05
rs572880 chr1:232592861 SIPA1L2 C - 13 T vs. C 0.358 (C) 0.175 (C) <1 (-) 0 (-) >0.05
rs10910541 chr1:232621645 SIPA1L2 C - 13 T vs. C 0.233 (T) 0.058 (T) >1 (-) 0 (-) >0.05
rs114225129 chr1:232682702 SIPA1L2 C - 10 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs6682833 chr1:232708430 SIPA1L2 [+11126bp] C - 13 T vs. C - - >1 (-) 36 (-) >0.05

Association studies for this region [+]