SLC26A1, chr4:972861-987228 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34311866 chr4:951947 TMEM175 All: C 120,238 21 C vs. T 0.15 (C) 0.075 (C) 1.26 (1.22-1.31) 52 (21-71) 6.00e-41
Meta_image?name=rs34311866

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34311866 chr4:951947 TMEM175 All: C 120,238 21 C vs. T 0.15 (C) 0.075 (C) 1.26 (1.22-1.31) 52 (21-71) 6.00e-41
rs11730111 chr4:942833 TMEM175 All: C 108,990 15 T vs. C 0.133 (T) 0.092 (T) 1.23 (1.17-1.29) 35 (0-65) 2.77e-17
rs10516158 chr4:942439 TMEM175 All: C 108,990 15 T vs. C 0.125 (T) 0.1 (T) 1.23 (1.17-1.29) 35 (0-65) 2.79e-17
rs62294486 chr4:961919 DGKQ All: C 105,041 14 T vs. C 0.333 (T) 0.358 (T) 0.87 (0.84-0.90) 41 (0-69) 2.88e-17
rs62294484 chr4:935571 TMEM175 All: C 108,990 15 G vs. A 0.125 (G) 0.092 (G) 1.25 (1.18-1.32) 31 (0-63) 1.31e-16
rs11248059 chr4:960331 DGKQ All: C 108,990 15 G vs. C 0.142 (G) 0.083 (G) 1.22 (1.16-1.28) 39 (0-67) 1.48e-16
rs748483 chr4:952409 TMEM175 All: C 108,990 15 G vs. A 0.142 (G) 0.058 (G) 1.22 (1.16-1.28) 38 (0-66) 1.75e-16
rs3755958 chr4:963042 DGKQ All: C 108,990 15 A vs. C 0.142 (A) - 1.22 (1.16-1.27) 40 (0-68) 2.06e-16
rs11725653 chr4:963397 DGKQ All: C 108,990 15 T vs. C 0.15 (T) 0.092 (T) 1.22 (1.16-1.27) 40 (0-68) 2.08e-16
rs11728344 chr4:963755 DGKQ All: C 108,990 15 C vs. T 0.142 (C) 0.083 (C) 1.21 (1.16-1.27) 41 (0-68) 2.59e-16
rs11248060 chr4:964359 DGKQ All: C 108,990 15 T vs. C 0.142 (T) 0.092 (T) 1.21 (1.16-1.27) 41 (0-68) 2.84e-16
rs28817103 chr4:934469 TMEM175 All: C 108,990 15 A vs. G 0.042 (A) 0.092 (A) 1.30 (1.22-1.39) 33 (0-64) 1.89e-15
rs4690326 chr4:953698 DGKQ All: C 105,041 14 C vs. A 0.45 (C) 0.425 (C) 0.88 (0.85-0.91) 34 (0-65) 5.44e-15
rs1377587 chr4:961191 DGKQ All: C 105,041 14 G vs. A 0.467 (G) - 0.88 (0.85-0.91) 34 (0-65) 9.55e-15
rs3733345 chr4:954247 DGKQ All: C 105,041 14 T vs. G 0.45 (T) 0.433 (T) 0.88 (0.85-0.91) 36 (0-66) 1.03e-14
rs1051613 chr4:951179 TMEM175 All: C 105,041 14 A vs. G 0.5 (A) 0.267 (A) 0.88 (0.85-0.91) 28 (0-62) 1.92e-14
rs111344337 chr4:967335 DGKQ All: C 105,041 14 G vs. T 0.458 (G) - 1.15 (1.11-1.19) 25 (0-60) 2.20e-14
rs113881148 chr4:967331 DGKQ All: C 105,041 14 C vs. A 0.45 (C) - 1.15 (1.11-1.19) 23 (0-59) 3.85e-14
rs6599389 chr4:939113 TMEM175 All: C 105,041 14 G vs. A - 0.242 (A) 0.81 (0.76-0.85) 41 (0-69) 1.32e-13
rs4690196 chr4:960713 DGKQ All: C 105,041 14 A vs. G 0.458 (A) 0.333 (A) 0.89 (0.86-0.92) 27 (0-61) 1.67e-13
rs1377586 chr4:961373 DGKQ All: C 105,041 14 A vs. G 0.408 (A) 0.317 (A) 0.89 (0.86-0.92) 24 (0-60) 2.22e-13
rs3733349 chr4:954311 DGKQ All: C 105,041 14 T vs. C 0.425 (T) 0.308 (T) 0.89 (0.86-0.92) 22 (0-59) 3.37e-13
rs10017289 chr4:943534 TMEM175 All: C 108,990 15 G vs. C 0.35 (G) 0.35 (G) 0.89 (0.86-0.92) 27 (0-61) 3.64e-13
rs6815138 chr4:941290 TMEM175 All: C 108,990 15 C vs. A 0.367 (C) 0.325 (C) 0.89 (0.86-0.92) 28 (0-61) 4.06e-13
rs13101828 chr4:965720 DGKQ All: C 105,041 14 G vs. A 0.408 (G) 0.317 (G) 0.89 (0.86-0.92) 15 (0-53) 4.22e-13
rs3733344 chr4:951040 TMEM175 All: C 105,041 14 G vs. T 0.392 (G) 0.35 (G) 0.89 (0.86-0.92) 30 (0-63) 5.58e-13
rs34884217 chr4:944210 TMEM175 All: C 105,041 14 C vs. A 0.1 (C) - 0.74 (0.69-0.81) 19 (0-56) 1.56e-12
rs873786 chr4:925376 GAK All: C 105,041 14 T vs. C 0.1 (T) - 0.76 (0.70-0.82) 24 (0-60) 1.69e-12
rs11724804 chr4:965779 DGKQ All: C 105,041 14 A vs. G 0.408 (A) 0.317 (A) 0.89 (0.86-0.92) 18 (0-56) 2.21e-12
rs873785 chr4:925149 GAK All: C 108,990 15 C vs. T 0.375 (C) 0.192 (C) 0.89 (0.86-0.92) 0 (0-37) 6.48e-12
rs11248061 chr4:980896 SLC26A1 All: C 105,041 14 C vs. A - 0.292 (A) 1.14 (1.10-1.19) 13 (0-51) 7.00e-12
rs3733343 chr4:950737 TMEM175 All: C 105,041 14 C vs. T 0.392 (C) 0.342 (C) 0.89 (0.86-0.92) 30 (0-63) 8.02e-12
rs11726637 chr4:972231 DGKQ All: C 105,041 14 G vs. A - - 0.81 (0.76-0.86) 43 (0-70) 9.96e-12
rs4583705 chr4:973036 DGKQ All: C 105,041 14 T vs. C 0.142 (T) 0.092 (T) 1.24 (1.16-1.31) 45 (0-70) 1.47e-11
rs10902761 chr4:947767 TMEM175 All: C 105,041 14 G vs. A 0.367 (G) 0.367 (G) 0.90 (0.87-0.93) 26 (0-61) 2.21e-11
rs2290404 chr4:945225 TMEM175 All: C 105,041 14 G vs. A 0.392 (G) 0.342 (G) 0.90 (0.87-0.93) 31 (0-63) 3.11e-11
rs17783233 chr4:976598 DGKQ All: C 105,041 14 C vs. T 0.142 (C) 0.092 (C) 1.23 (1.16-1.31) 46 (0-71) 3.62e-11
rs28504033 chr4:948640 TMEM175 All: C 105,041 14 A vs. G 0.342 (A) 0.167 (A) 0.90 (0.87-0.93) 15 (0-53) 1.25e-10
rs10008187 chr4:941017 TMEM175 All: C 108,990 15 T vs. C 0.342 (T) 0.15 (T) 0.90 (0.87-0.93) 10 (0-48) 1.67e-10
rs2290403 chr4:942006 TMEM175 All: C 108,990 15 A vs. G 0.342 (A) 0.175 (A) 0.90 (0.87-0.93) 11 (0-49) 1.69e-10
rs11729289 chr4:939206 TMEM175 All: C 108,990 15 A vs. G 0.342 (A) 0.167 (A) 0.90 (0.87-0.93) 10 (0-47) 1.74e-10
rs6813110 chr4:942660 TMEM175 All: C 108,990 15 T vs. C 0.342 (T) 0.167 (T) 0.90 (0.87-0.93) 11 (0-49) 1.79e-10
rs73219733 chr4:1013634 FGFRL1 All: C 102,072 13 T vs. C 0.108 (T) 0.033 (T) 1.20 (1.13-1.27) 0 (0-56) 2.29e-09
rs62294491 chr4:969111 DGKQ All: C 105,041 14 T vs. C 0.142 (T) 0.092 (T) 1.17 (1.11-1.24) 24 (0-60) 5.00e-08
rs11248062 chr4:989022 IDUA C - 9 A vs. G - - <1 (-) 31 (-) <1.00e-06
rs3822019 chr4:951161 TMEM175 All: C 105,041 14 T vs. C 0.125 (T) 0.192 (T) 1.12 (1.07-1.16) 21 (0-58) 5.57e-07
rs77822621 chr4:1008212 FGFRL1 All: C 105,041 14 T vs. C 0.017 (T) - 0.79 (0.72-0.87) 5 (0-57) 6.76e-07
rs11724898 chr4:935933 TMEM175 C - 12 A vs. G - - <1 (-) 26 (-) <1.00e-06
rs2290402 chr4:941518 TMEM175 All: C 98,136 13 T vs. C 0.092 (T) 0.233 (T) 1.12 (1.07-1.17) 23 (0-60) 9.05e-07
rs10016294 chr4:936567 TMEM175 C - 13 A vs. G - - >1 (-) 21 (-) <1.00e-04

Association studies for this region [+]