SLC30A6, chr2:32390933-32449448 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs212742 chr2:32408629 SLC30A6 All: C 108,990 15 C vs. T - - 1.08 (1.04-1.12) 0 (0-38) 1.61e-05
Meta_image?name=rs212742

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs212742 chr2:32408629 SLC30A6 All: C 108,990 15 C vs. T - - 1.08 (1.04-1.12) 0 (0-38) 1.61e-05
rs212754 chr2:32421628 SLC30A6 All: C 108,990 15 A vs. G 0.225 (A) 0.433 (A) 0.93 (0.89-0.96) 0 (0-47) 1.77e-05
rs212747 chr2:32414704 SLC30A6 All: C 108,990 15 A vs. G 0.258 (A) 0.433 (A) 0.93 (0.89-0.96) 0 (0-49) 2.07e-05
rs449348 chr2:32499150 YIPF4 [-3829bp] All: C 108,990 15 A vs. G - - 1.08 (1.04-1.12) 0 (0-38) 2.24e-05
rs375050 chr2:32413765 SLC30A6 All: C 108,990 15 C vs. T 0.217 (C) 0.425 (C) 0.93 (0.89-0.96) 0 (0-48) 2.36e-05
rs12611678 chr2:32347785 SPAST All: C 108,990 15 A vs. G 0.267 (A) 0.392 (G) 0.93 (0.89-0.96) 0 (0-43) 2.81e-05
rs11683110 chr2:32349813 SPAST All: C 108,990 15 C vs. T 0.267 (C) 0.392 (T) 0.93 (0.90-0.96) 0 (0-35) 2.90e-05
rs34197800 chr2:32389646 SLC30A6 [-1287bp] All: C 108,990 15 A vs. C 0.217 (A) 0.483 (A) 0.93 (0.90-0.96) 0 (0-43) 3.22e-05
rs7574000 chr2:32342888 SPAST All: C 108,990 15 C vs. A 0.208 (C) 0.475 (C) 0.93 (0.90-0.96) 0 (0-44) 3.73e-05
rs13006880 chr2:32355539 SPAST All: C 108,990 15 G vs. A - - 1.08 (1.04-1.12) 0 (0-46) 3.92e-05
rs13006495 chr2:32355490 SPAST All: C 108,990 15 T vs. C 0.217 (T) 0.475 (T) 0.93 (0.90-0.96) 0 (0-45) 4.12e-05
rs56322034 chr2:32353013 SPAST All: C 108,990 15 C vs. T 0.217 (C) 0.467 (C) 0.93 (0.90-0.96) 0 (0-45) 4.27e-05
rs2294178 chr2:32353324 SPAST All: C 108,990 15 A vs. C - - 1.08 (1.04-1.12) 0 (0-45) 4.28e-05
rs13013695 chr2:32391231 SLC30A6 All: C 108,990 15 A vs. G 0.175 (A) 0.475 (A) 0.93 (0.89-0.96) 0 (0-46) 4.32e-05
rs35978916 chr2:32400635 SLC30A6 All: C 108,990 15 C vs. T 0.225 (C) 0.425 (C) 0.93 (0.89-0.96) 0 (0-44) 4.44e-05
rs7592239 chr2:32370258 SPAST All: C 108,990 15 A vs. C 0.267 (A) 0.392 (C) 0.93 (0.90-0.96) 0 (0-53) 4.49e-05
rs7562653 chr2:32478629 NLRC4 All: C 108,990 15 T vs. C 0.208 (T) 0.475 (T) 0.93 (0.89-0.96) 7 (0-43) 4.73e-05
rs410469 chr2:32476992 NLRC4 All: C 108,990 15 T vs. G 0.208 (T) 0.483 (T) 0.93 (0.89-0.96) 8 (0-44) 4.76e-05
rs212736 chr2:32473126 NLRC4 All: C 108,990 15 T vs. C 0.192 (T) 0.392 (T) 0.93 (0.89-0.96) 15 (0-53) 5.82e-05
rs686005 chr2:32493210 NLRC4 [+2287bp] All: C 108,990 15 T vs. C 0.225 (T) 0.458 (C) 0.93 (0.89-0.96) 0 (0-44) 6.78e-05
rs212696 chr2:32441685 SLC30A6 All: C 102,085 14 A vs. G 0.217 (A) 0.383 (A) 0.92 (0.89-0.96) 16 (0-54) 6.95e-05
rs212710 chr2:32455578 NLRC4 All: C 108,990 15 T vs. C - 0.417 (C) 1.08 (1.04-1.12) 3 (0-55) 9.09e-05
rs2280972 chr2:32377961 SPAST All: C 108,990 15 T vs. C 0.2 (T) 0.367 (T) 0.93 (0.89-0.96) 0 (0-52) 9.14e-05
rs11683760 chr2:32364093 SPAST All: C 108,990 15 T vs. C 0.267 (T) 0.392 (C) 0.94 (0.90-0.97) 0 (0-46) 1.39e-04
rs11694630 chr2:32376201 SPAST All: C 108,990 15 A vs. G 0.267 (A) - 0.94 (0.91-0.97) 0 (0-38) 2.01e-04
rs212761 chr2:32429288 SLC30A6 All: C 108,990 15 T vs. C 0.225 (T) 0.458 (T) 0.94 (0.90-0.97) 21 (0-57) 5.16e-04
rs462878 chr2:32438655 SLC30A6 All: C 108,990 15 A vs. G 0.208 (A) 0.342 (A) 0.94 (0.91-0.97) 33 (0-64) 7.30e-04
rs212691 chr2:32438075 SLC30A6 All: C 108,990 15 G vs. A 0.192 (G) 0.35 (G) 0.94 (0.91-0.98) 33 (0-64) 9.94e-04
rs12618002 chr2:32347715 SPAST C - 13 A vs. T 0.258 (T) 0.392 (A) >1 (-) 0 (-) <0.05
chr2:32469984 chr2:32469984 NLRC4 C - 6 A vs. C - - <1 (-) 0 (-) <0.05
rs12996943 chr2:32373645 SPAST C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs212751 chr2:32418808 SLC30A6 C - 13 A vs. T 0.217 (T) 0.433 (T) >1 (-) 0 (-) <0.05
rs12712326 chr2:32384194 SPAST [+1488bp] C - 13 C vs. G 0.133 (G) - <1 (-) 0 (-) <0.05
rs13428933 chr2:32358864 SPAST C - 13 A vs. C 0.125 (C) - <1 (-) 0 (-) <0.05
rs75288589 chr2:32355214 SPAST C - 13 A vs. G 0.142 (G) - <1 (-) 0 (-) <0.05
rs13425083 chr2:32357588 SPAST C - 13 A vs. G 0.125 (G) - <1 (-) 0 (-) <0.05
rs7596656 chr2:32364735 SPAST C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs79698160 chr2:32486384 NLRC4 C - 13 T vs. C 0.05 (T) 0.108 (T) >1 (-) 0 (-) <0.05
rs146818181 chr2:32407746 SLC30A6 C - 4 A vs. C - - <1 (-) 0 (-) <0.05
rs76105852 chr2:32479709 NLRC4 C - 13 C vs. G 0.092 (G) - <1 (-) 0 (-) <0.05
rs805831 chr2:32484228 NLRC4 C - 13 C vs. G 0.217 (C) 0.483 (G) <1 (-) 12 (-) <0.05
rs3769602 chr2:32381829 SPAST C - 13 A vs. G 0.267 (A) 0.375 (G) <1 (-) 0 (-) <0.05
rs34976640 chr2:32373514 SPAST C - 13 T vs. G - - <1 (-) 0 (-) <0.05
rs7572964 chr2:32372096 SPAST C - 13 A vs. T 0.267 (T) 0.392 (A) >1 (-) 0 (-) <0.05
rs3769603 chr2:32360887 SPAST C - 13 T vs. G 0.225 (T) - <1 (-) 0 (-) <0.05
rs3752916 chr2:32354558 SPAST C - 13 T vs. C 0.25 (T) 0.392 (C) <1 (-) 0 (-) <0.05
rs11678119 chr2:32376303 SPAST C - 13 T vs. C - 0.433 (T) >1 (-) 0 (-) <0.05
rs2886393 chr2:32371562 SPAST C - 13 C vs. G 0.267 (C) 0.4 (G) <1 (-) 0 (-) <0.05
rs13008192 chr2:32350427 SPAST C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs11683842 chr2:32364131 SPAST C - 13 A vs. G 0.267 (A) 0.392 (G) <1 (-) 0 (-) <0.05

Association studies for this region [+]