SLC30A6, chr2:32390933-32449448 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs212742 chr2:32408629 SLC30A6 All: C 108,990 15 C vs. T - - 1.08 (1.04-1.12) 0 (0-38) 1.61e-05
Meta_image?name=rs212742

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs139350577 chr2:32479178 NLRC4 C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs7581432 chr2:32395315 SLC30A6 C - 13 A vs. G 0.4 (G) 0.392 (A) >1 (-) 0 (-) >0.05
rs4407291 chr2:32384422 SPAST [+1716bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs7588883 chr2:32397267 SLC30A6 C - 13 A vs. G 0.4 (G) 0.392 (A) >1 (-) 0 (-) >0.05
rs140212900 chr2:32389296 SLC30A6 [-1637bp] C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs10208246 chr2:32386659 SPAST [+3953bp] C - 13 A vs. G 0.425 (G) 0.392 (A) >1 (-) 0 (-) >0.05
rs212749 chr2:32415977 SLC30A6 C - 13 T vs. C 0.4 (T) 0.442 (C) <1 (-) 0 (-) >0.05
rs212741 chr2:32408572 SLC30A6 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs3851308 chr2:32346493 SPAST C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2365556 chr2:32369901 SPAST C - 9 T vs. C - 0.0 (T) <1 (-) 18 (-) >0.05
rs212686 chr2:32434869 SLC30A6 C - 13 T vs. C 0.4 (C) 0.433 (T) >1 (-) 0 (-) >0.05
rs12465351 chr2:32394905 SLC30A6 C - 13 C vs. G 0.4 (C) 0.392 (G) <1 (-) 0 (-) >0.05
rs212687 chr2:32435176 SLC30A6 C - 13 A vs. G 0.4 (G) 0.433 (A) >1 (-) 0 (-) >0.05
rs6717209 chr2:32393949 SLC30A6 C - 13 A vs. C 0.4 (A) 0.392 (C) <1 (-) 0 (-) >0.05
rs2366736 chr2:32392448 SLC30A6 C - 13 A vs. C 0.367 (C) 0.392 (A) >1 (-) 0 (-) >0.05
rs212744 chr2:32411788 SLC30A6 C - 13 C vs. G 0.4 (C) 0.45 (G) <1 (-) 0 (-) >0.05
rs4952209 chr2:32386033 SPAST [+3327bp] C - 13 C vs. G 0.4 (C) 0.392 (G) <1 (-) 0 (-) >0.05
rs145521277 chr2:32364438 SPAST C - 4 A vs. C - - >1 (-) 13 (-) >0.05
rs11124278 chr2:32398512 SLC30A6 C - 13 A vs. G 0.4 (G) - >1 (-) 0 (-) >0.05
rs212753 chr2:32421355 SLC30A6 C - 13 A vs. G 0.392 (G) 0.417 (A) >1 (-) 0 (-) >0.05
rs72796869 chr2:32381964 SPAST C - 12 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs212740 chr2:32408194 SLC30A6 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs6719805 chr2:32364648 SPAST C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs140850143 chr2:32384523 SPAST [+1817bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs212706 chr2:32451132 NLRC4 C - 13 A vs. G 0.333 (A) 0.483 (G) >1 (-) 0 (-) >0.05
rs212708 chr2:32451446 NLRC4 C - 13 A vs. G 0.333 (A) 0.483 (G) >1 (-) 0 (-) >0.05
rs212707 chr2:32451148 NLRC4 C - 13 T vs. C 0.325 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs79921196 chr2:32364213 SPAST C - 13 T vs. G 0.05 (G) - <1 (-) 0 (-) >0.05
rs4519572 chr2:32384375 SPAST [+1669bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs72863940 chr2:32394674 SLC30A6 C - 13 T vs. C 0.408 (T) 0.392 (C) <1 (-) 0 (-) >0.05
rs4952252 chr2:32382961 SPAST [+255bp] C - 13 T vs. C 0.4 (C) 0.375 (T) >1 (-) 0 (-) >0.05
rs116362351 chr2:32408475 SLC30A6 C - 13 T vs. C 0.042 (T) - <1 (-) 16 (-) >0.05
rs72493393 chr2:32353155 SPAST C - 13 T vs. C 0.05 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs212738 chr2:32403322 SLC30A6 C - 13 A vs. T 0.408 (T) 0.392 (A) >1 (-) 0 (-) >0.05
rs78926455 chr2:32344688 SPAST C - 12 T vs. G 0.042 (G) - >1 (-) 53 (-) >0.05
rs76027085 chr2:32403311 SLC30A6 C - 3 T vs. C - - >1 (-) 82 (-) >0.05
rs11676475 chr2:32389190 SLC30A6 [-1743bp] C - 13 T vs. C 0.4 (T) 0.408 (C) <1 (-) 0 (-) >0.05
rs77521523 chr2:32453914 NLRC4 C - 5 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs61045200 chr2:32496875 NLRC4 [+5952bp] C - 12 A vs. G 0.025 (G) - <1 (-) 30 (-) >0.05
rs6716179 chr2:32393076 SLC30A6 C - 13 A vs. C 0.4 (A) 0.383 (C) <1 (-) 0 (-) >0.05
rs147796448 chr2:32464727 NLRC4 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs111934361 chr2:32433536 SLC30A6 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs142098079 chr2:32367593 SPAST C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs151219412 chr2:32468067 NLRC4 C - 5 T vs. G - - <1 (-) 43 (-) >0.05
rs140803144 chr2:32402779 SLC30A6 C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs116366987 chr2:32417845 SLC30A6 C - 4 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs140503946 chr2:32445967 SLC30A6 C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs212703 chr2:32446613 SLC30A6 C - 13 A vs. G 0.392 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs12997026 chr2:32394307 SLC30A6 C - 13 A vs. T 0.4 (T) 0.392 (A) >1 (-) 0 (-) >0.05
rs212756 chr2:32424288 SLC30A6 C - 13 A vs. G 0.392 (A) 0.467 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]