SLC45A3, chr1:205626979-205649587 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3747973 chr1:205677148 NUCKS1 [-4799bp] All: C 108,990 15 A vs. G 0.383 (A) 0.35 (G) 0.89 (0.86-0.92) 38 (0-66) 1.69e-12
Meta_image?name=rs3747973

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs823099 chr1:205669322 NUCKS1 [-12625bp] C - 13 A vs. C 0.442 (C) - >1 (-) 24 (-) >0.05
rs78319659 chr1:205658824 SLC45A3 [+9237bp] C - 13 C vs. G 0.033 (C) - <1 (-) 49 (-) >0.05
rs111942467 chr1:205620895 SLC45A3 [-6084bp] C - 13 A vs. G - - <1 (-) 16 (-) >0.05
rs72750910 chr1:205598912 ELK4 C - 13 T vs. C 0.258 (C) - <1 (-) 0 (-) >0.05
rs35504176 chr1:205626904 SLC45A3 [-75bp] C - 13 A vs. G 0.033 (A) 0.325 (A) <1 (-) 0 (-) >0.05
rs34244565 chr1:205626995 SLC45A3 C - 13 C vs. G 0.033 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs1064406 chr1:205589574 ELK4 C - 13 T vs. C 0.025 (T) 0.333 (T) <1 (-) 0 (-) >0.05
rs151174597 chr1:205637908 SLC45A3 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs6593957 chr1:205600653 ELK4 C - 13 T vs. C - - >1 (-) 38 (-) >0.05
rs2185811 chr1:205596870 ELK4 C - 13 T vs. C 0.025 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs34193126 chr1:205596327 ELK4 C - 13 T vs. C 0.025 (C) 0.325 (C) >1 (-) 0 (-) >0.05
rs4951252 chr1:205623680 SLC45A3 [-3299bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12048218 chr1:205594936 ELK4 C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs12048882 chr1:205594617 ELK4 C - 13 T vs. C 0.025 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs34310773 chr1:205592698 ELK4 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs35219050 chr1:205584387 ELK4 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs72749001 chr1:205587013 ELK4 C - 13 A vs. G 0.025 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs72750957 chr1:205658834 SLC45A3 [+9247bp] C - 13 A vs. G - - >1 (-) 37 (-) >0.05
rs7529037 chr1:205637501 SLC45A3 C - 13 C vs. G 0.325 (C) 0.383 (G) <1 (-) 0 (-) >0.05
rs12023314 chr1:205653131 SLC45A3 [+3544bp] C - 13 A vs. G - - >1 (-) 32 (-) >0.05
rs137949511 chr1:205628616 SLC45A3 C - 10 T vs. C - - >1 (-) 6 (-) >0.05
rs1573104 chr1:205636907 SLC45A3 C - 13 A vs. C 0.317 (C) 0.383 (A) >1 (-) 0 (-) >0.05
rs1775139 chr1:205672357 NUCKS1 [-9590bp] C - 13 C vs. G 0.117 (C) 0.425 (G) >1 (-) 36 (-) >0.05
rs1772134 chr1:205651513 SLC45A3 [+1926bp] C - 13 C vs. G - - <1 (-) 25 (-) >0.05
rs11580364 chr1:205653580 SLC45A3 [+3993bp] C - 13 T vs. C - - <1 (-) 27 (-) >0.05
rs76376706 chr1:205634506 SLC45A3 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs823103 chr1:205658832 SLC45A3 [+9245bp] C - 13 A vs. G 0.108 (G) 0.417 (A) <1 (-) 28 (-) >0.05
rs1772133 chr1:205651810 SLC45A3 [+2223bp] C - 13 T vs. C - - >1 (-) 26 (-) >0.05
rs74143155 chr1:205686225 NUCKS1 C - 10 A vs. T - - <1 (-) 29 (-) >0.05
rs71152445 chr1:205620986 SLC45A3 [-5993bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs35381862 chr1:205621839 SLC45A3 [-5140bp] C - 12 A vs. G - - <1 (-) 50 (-) >0.05
rs59957335 chr1:205690235 NUCKS1 C - 10 T vs. C 0.008 (C) - <1 (-) 29 (-) >0.05
rs16856217 chr1:205694122 NUCKS1 C - 10 A vs. G - - <1 (-) 29 (-) >0.05
rs78347477 chr1:205645310 SLC45A3 C - 13 A vs. G 0.075 (A) - <1 (-) 26 (-) >0.05
rs4951256 chr1:205652705 SLC45A3 [+3118bp] C - 13 T vs. C 0.117 (T) 0.442 (C) >1 (-) 29 (-) >0.05
rs4951018 chr1:205636334 SLC45A3 C - 13 A vs. C 0.283 (C) 0.442 (C) >1 (-) 31 (-) >0.05
rs1775147 chr1:205648707 SLC45A3 C - 13 T vs. G 0.1 (T) 0.45 (G) >1 (-) 26 (-) >0.05
rs28721375 chr1:205653261 SLC45A3 [+3674bp] C - 13 T vs. C 0.125 (T) 0.442 (C) >1 (-) 30 (-) >0.05
rs74143846 chr1:205697892 NUCKS1 C - 10 T vs. C 0.008 (C) - <1 (-) 28 (-) >0.05
rs144437550 chr1:205675716 NUCKS1 [-6231bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs823107 chr1:205656022 SLC45A3 [+6435bp] C - 13 A vs. G - - <1 (-) 29 (-) >0.05
rs12023128 chr1:205598225 ELK4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs1775152 chr1:205650138 SLC45A3 [+551bp] C - 13 T vs. C 0.117 (T) 0.442 (C) >1 (-) 26 (-) >0.05
rs1772137 chr1:205649327 SLC45A3 C - 13 T vs. C 0.067 (C) 0.442 (T) <1 (-) 29 (-) >0.05
rs1094648 chr1:205655073 SLC45A3 [+5486bp] C - 13 T vs. C - - <1 (-) 28 (-) >0.05
rs11545017 chr1:205611677 ELK4 [+10587bp] C - 13 A vs. G 0.383 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs76104815 chr1:205694259 NUCKS1 C - 13 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs146414537 chr1:205583253 ELK4 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs148498289 chr1:205693829 NUCKS1 C - 9 A vs. C - - >1 (-) 0 (-) >0.05
rs4951248 chr1:205601119 ELK4 [+29bp] C - 11 A vs. T - 0.342 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]