SLC45A3, chr1:205626979-205649587 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3747973 chr1:205677148 NUCKS1 [-4799bp] All: C 108,990 15 A vs. G 0.383 (A) 0.35 (G) 0.89 (0.86-0.92) 38 (0-66) 1.69e-12
Meta_image?name=rs3747973

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141969842 chr1:205643920 SLC45A3 C - 13 T vs. C - - >1 (-) 25 (-) >0.05
rs16856110 chr1:205631767 SLC45A3 C - 13 A vs. G 0.275 (G) 0.45 (G) >1 (-) 30 (-) >0.05
rs34851857 chr1:205600344 ELK4 C - 13 T vs. C 0.042 (T) 0.183 (T) <1 (-) 1 (-) >0.05
rs6673283 chr1:205615791 SLC45A3 [-11188bp] C - 13 A vs. G 0.367 (G) 0.333 (G) <1 (-) 16 (-) >0.05
rs28541323 chr1:205614117 SLC45A3 [-12862bp] C - 13 A vs. G 0.4 (G) 0.358 (G) <1 (-) 9 (-) >0.05
rs3088136 chr1:205601464 ELK4 [+374bp] C - 13 C vs. G 0.158 (G) 0.358 (G) >1 (-) 11 (-) >0.05
rs3761916 chr1:205630893 SLC45A3 C - 13 A vs. G 0.308 (G) 0.433 (A) >1 (-) 0 (-) >0.05
rs4951247 chr1:205597321 ELK4 C - 13 A vs. G 0.092 (A) 0.35 (G) <1 (-) 14 (-) >0.05
rs11589772 chr1:205622275 SLC45A3 [-4704bp] C - 13 T vs. C 0.158 (C) 0.0 (C) >1 (-) 0 (-) >0.05
rs6677015 chr1:205616951 SLC45A3 [-10028bp] C - 13 A vs. G 0.358 (G) 0.333 (G) <1 (-) 16 (-) >0.05
rs114944833 chr1:205666310 NUCKS1 [-15637bp] C - 11 T vs. C - - >1 (-) 47 (-) >0.05
rs55736919 chr1:205629200 SLC45A3 C - 13 A vs. C - - >1 (-) 38 (-) >0.05
rs4573566 chr1:205580316 ELK4 C - 13 T vs. C 0.1 (C) 0.325 (T) >1 (-) 15 (-) >0.05
rs11240545 chr1:205617379 SLC45A3 [-9600bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs1109893 chr1:205616742 SLC45A3 [-10237bp] C - 13 T vs. C 0.35 (C) 0.333 (C) <1 (-) 18 (-) >0.05
rs137948218 chr1:205639192 SLC45A3 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs10751443 chr1:205634853 SLC45A3 C - 13 T vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs10751442 chr1:205634671 SLC45A3 C - 13 A vs. G 0.008 (A) 0.0 (A) >1 (-) 0 (-) >0.05
rs7511727 chr1:205621429 SLC45A3 [-5550bp] C - 13 A vs. G 0.367 (A) 0.292 (A) >1 (-) 17 (-) >0.05
rs72750936 chr1:205622799 SLC45A3 [-4180bp] C - 13 A vs. G 0.367 (G) 0.333 (G) <1 (-) 16 (-) >0.05
rs6687995 chr1:205616810 SLC45A3 [-10169bp] C - 13 A vs. G 0.367 (A) 0.333 (A) >1 (-) 17 (-) >0.05
rs147887712 chr1:205590299 ELK4 C - 13 A vs. G - - <1 (-) 17 (-) >0.05
rs12406231 chr1:205617366 SLC45A3 [-9613bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs3949286 chr1:205610149 ELK4 [+9059bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs7514718 chr1:205622253 SLC45A3 [-4726bp] C - 13 A vs. G 0.233 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs11240544 chr1:205615442 SLC45A3 [-11537bp] C - 13 T vs. C 0.367 (C) 0.333 (C) <1 (-) 15 (-) >0.05
rs12082741 chr1:205614004 ELK4 [+12914bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs59990545 chr1:205631404 SLC45A3 C - 13 A vs. C - - >1 (-) 38 (-) >0.05
rs57847589 chr1:205631456 SLC45A3 C - 13 A vs. G - - >1 (-) 38 (-) >0.05
rs66742105 chr1:205636354 SLC45A3 C - 13 T vs. C - - >1 (-) 37 (-) >0.05
rs55781355 chr1:205638618 SLC45A3 C - 13 C vs. G - - >1 (-) 37 (-) >0.05
rs6684271 chr1:205615567 SLC45A3 [-11412bp] C - 13 A vs. G 0.367 (A) 0.333 (A) >1 (-) 14 (-) >0.05
rs7521095 chr1:205637366 SLC45A3 C - 13 T vs. C - - <1 (-) 37 (-) >0.05
rs72750941 chr1:205633323 SLC45A3 C - 13 T vs. C - - >1 (-) 38 (-) >0.05
rs147074962 chr1:205667076 NUCKS1 [-14871bp] C - 13 A vs. G - - <1 (-) 25 (-) >0.05
rs111407522 chr1:205633983 SLC45A3 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs34087906 chr1:205591676 ELK4 C - 13 A vs. G 0.058 (A) 0.35 (A) <1 (-) 0 (-) >0.05
rs11240543 chr1:205613376 ELK4 [+12286bp] C - 13 T vs. C 0.367 (C) 0.333 (C) <1 (-) 13 (-) >0.05
rs113716138 chr1:205613005 ELK4 [+11915bp] C - 13 T vs. C - - >1 (-) 13 (-) >0.05
rs6680848 chr1:205612278 ELK4 [+11188bp] C - 13 A vs. T 0.367 (T) 0.333 (T) <1 (-) 13 (-) >0.05
rs34847373 chr1:205620746 SLC45A3 [-6233bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs6680742 chr1:205612126 ELK4 [+11036bp] C - 13 A vs. G 0.367 (G) 0.333 (G) <1 (-) 11 (-) >0.05
rs35250853 chr1:205617830 SLC45A3 [-9149bp] C - 13 T vs. C 0.067 (T) 0.35 (T) <1 (-) 0 (-) >0.05
rs147344397 chr1:205633867 SLC45A3 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs34606094 chr1:205651334 SLC45A3 [+1747bp] C - 12 T vs. C - - <1 (-) 24 (-) >0.05
rs35332689 chr1:205620387 SLC45A3 [-6592bp] C - 13 A vs. T - 0.342 (A) <1 (-) 0 (-) >0.05
rs12043720 chr1:205618672 SLC45A3 [-8307bp] C - 13 T vs. C 0.067 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs4951017 chr1:205619324 SLC45A3 [-7655bp] C - 13 T vs. C 0.067 (C) 0.35 (C) >1 (-) 0 (-) >0.05
rs16856082 chr1:205611703 ELK4 [+10613bp] C - 13 C vs. G 0.367 (C) 0.333 (C) >1 (-) 12 (-) >0.05
rs78275044 chr1:205595817 ELK4 C - 13 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05

Association studies for this region [+]