SLC45A3, chr1:205626979-205649587 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3747973 chr1:205677148 NUCKS1 [-4799bp] All: C 108,990 15 A vs. G 0.383 (A) 0.35 (G) 0.89 (0.86-0.92) 38 (0-66) 1.69e-12
Meta_image?name=rs3747973

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6699849 chr1:205622660 SLC45A3 [-4319bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2096209 chr1:205635425 SLC45A3 C - 13 T vs. C 0.008 (T) 0.0 (T) >1 (-) 0 (-) >0.05
rs4951253 chr1:205623865 SLC45A3 [-3114bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs151258054 chr1:205673916 NUCKS1 [-8031bp] C - 11 T vs. C - - >1 (-) 62 (-) >0.05
rs140566664 chr1:205595153 ELK4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs11805296 chr1:205671448 NUCKS1 [-10499bp] C - 11 A vs. G 0.008 (A) - >1 (-) 62 (-) >0.05
rs77394025 chr1:205675779 NUCKS1 [-6168bp] C - 11 T vs. C 0.008 (C) - <1 (-) 64 (-) >0.05
rs16856211 chr1:205688290 NUCKS1 C - 13 T vs. C 0.1 (C) - >1 (-) 0 (-) >0.05
rs6672675 chr1:205615120 SLC45A3 [-11859bp] C - 13 A vs. C 0.358 (C) 0.317 (C) <1 (-) 22 (-) >0.05
rs56927917 chr1:205633573 SLC45A3 C - 13 T vs. C - - <1 (-) 38 (-) >0.05
rs11579937 chr1:205608132 ELK4 [+7042bp] C - 13 A vs. T 0.133 (T) - >1 (-) 0 (-) >0.05
rs115340720 chr1:205595434 ELK4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12760905 chr1:205607932 ELK4 [+6842bp] C - 13 T vs. C 0.133 (T) 0.0 (T) <1 (-) 0 (-) >0.05
rs12072212 chr1:205613859 ELK4 [+12769bp] C - 13 A vs. G 0.367 (A) 0.333 (A) >1 (-) 15 (-) >0.05
rs74143150 chr1:205631909 SLC45A3 C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs12087328 chr1:205611528 ELK4 [+10438bp] C - 13 T vs. C 0.367 (T) 0.333 (T) >1 (-) 14 (-) >0.05
rs74634341 chr1:205673934 NUCKS1 [-8013bp] C - 13 T vs. C 0.017 (T) - <1 (-) 31 (-) >0.05
rs11579421 chr1:205607227 ELK4 [+6137bp] C - 13 T vs. C 0.367 (C) 0.333 (C) <1 (-) 10 (-) >0.05
rs12739143 chr1:205581063 ELK4 C - 10 T vs. G - - <1 (-) 0 (-) >0.05
rs34239003 chr1:205581693 ELK4 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs150591927 chr1:205675537 NUCKS1 [-6410bp] C - 13 C vs. G - - <1 (-) 32 (-) >0.05
rs116243767 chr1:205652456 SLC45A3 [+2869bp] C - 11 A vs. G - - >1 (-) 49 (-) >0.05
rs74728441 chr1:205676212 NUCKS1 [-5735bp] C - 13 A vs. G 0.017 (G) - >1 (-) 32 (-) >0.05
rs78876197 chr1:205677784 NUCKS1 [-4163bp] C - 13 T vs. C 0.008 (T) - <1 (-) 32 (-) >0.05
rs79375850 chr1:205680414 NUCKS1 [-1533bp] C - 13 A vs. G 0.017 (G) - >1 (-) 32 (-) >0.05
rs80002556 chr1:205685195 NUCKS1 C - 13 A vs. G 0.017 (G) - >1 (-) 33 (-) >0.05
rs78874940 chr1:205685554 NUCKS1 C - 13 T vs. C 0.017 (C) - >1 (-) 33 (-) >0.05
rs78841139 chr1:205692732 NUCKS1 C - 13 A vs. G 0.017 (A) - <1 (-) 34 (-) >0.05
rs67403669 chr1:205635292 SLC45A3 C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs139158037 chr1:205585302 ELK4 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs6685508 chr1:205640904 SLC45A3 C - 13 A vs. G - - <1 (-) 44 (-) >0.05
rs10900516 chr1:205582486 ELK4 C - 13 T vs. G 0.058 (T) 0.342 (T) <1 (-) 0 (-) >0.05
rs79614693 chr1:205584660 ELK4 C - 13 A vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs12048270 chr1:205595068 ELK4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs61822903 chr1:205591308 ELK4 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs77636349 chr1:205582916 ELK4 C - 13 T vs. C 0.033 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs114565068 chr1:205584150 ELK4 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs116507898 chr1:205578980 ELK4 C - 13 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs12043685 chr1:205618523 SLC45A3 [-8456bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs115625671 chr1:205582167 ELK4 C - 13 A vs. G 0.033 (G) 0.025 (G) <1 (-) 0 (-) >0.05
rs11240541 chr1:205594652 ELK4 C - 13 C vs. G 0.058 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs11240540 chr1:205581853 ELK4 C - 13 T vs. C 0.033 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs142077185 chr1:205641216 SLC45A3 C - 10 A vs. T - - <1 (-) 0 (-) >0.05
rs115642143 chr1:205603174 ELK4 [+2084bp] C - 13 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs74144434 chr1:205606073 ELK4 [+4983bp] C - 13 A vs. G 0.15 (G) 0.275 (G) >1 (-) 0 (-) >0.05
rs116664067 chr1:205671001 NUCKS1 [-10946bp] C - 13 A vs. T 0.017 (A) - <1 (-) 7 (-) >0.05
rs12025838 chr1:205600085 ELK4 C - 12 T vs. G 0.025 (G) 0.333 (G) >1 (-) 0 (-) >0.05
rs7545345 chr1:205690941 NUCKS1 C - 13 T vs. C - - >1 (-) 21 (-) >0.05
rs148314264 chr1:205655142 SLC45A3 [+5555bp] C - 11 A vs. G - - >1 (-) 44 (-) >0.05
rs79677312 chr1:205611143 ELK4 [+10053bp] C - 13 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05

Association studies for this region [+]