SLC45A3, chr1:205626979-205649587 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3747973 chr1:205677148 NUCKS1 [-4799bp] All: C 108,990 15 A vs. G 0.383 (A) 0.35 (G) 0.89 (0.86-0.92) 38 (0-66) 1.69e-12
Meta_image?name=rs3747973

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs150855094 chr1:205680864 NUCKS1 [-1083bp] C - 9 A vs. C - - >1 (-) 24 (-) >0.05
rs1123879 chr1:205634315 SLC45A3 C - 13 A vs. G 0.033 (A) 0.025 (A) <1 (-) 13 (-) >0.05
rs113058022 chr1:205651420 SLC45A3 [+1833bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs78623953 chr1:205582574 ELK4 C - 7 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs12565564 chr1:205621169 SLC45A3 [-5810bp] C - 13 A vs. G 0.075 (G) 0.042 (G) >1 (-) 25 (-) >0.05
rs2275753 chr1:205628073 SLC45A3 C - 10 A vs. G 0.017 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs147413161 chr1:205675880 NUCKS1 [-6067bp] C - 4 C vs. G - - >1 (-) 17 (-) >0.05
rs55915134 chr1:205641343 SLC45A3 C - 13 C vs. G 0.075 (G) - <1 (-) 0 (-) >0.05
rs75707661 chr1:205658865 SLC45A3 [+9278bp] C - 13 A vs. T 0.033 (T) - >1 (-) 0 (-) >0.05
rs7520276 chr1:205659491 SLC45A3 [+9904bp] C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs61824661 chr1:205648046 SLC45A3 C - 13 C vs. G 0.05 (G) - <1 (-) 0 (-) >0.05
rs16856094 chr1:205629815 SLC45A3 C - 13 A vs. G 0.033 (A) - <1 (-) 22 (-) >0.05
rs12075381 chr1:205623938 SLC45A3 [-3041bp] C - 13 T vs. C - - <1 (-) 5 (-) >0.05
rs16856148 chr1:205655725 SLC45A3 [+6138bp] C - 13 A vs. G 0.058 (A) - >1 (-) 0 (-) >0.05
rs116793336 chr1:205693560 NUCKS1 C - 12 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs6661827 chr1:205610774 ELK4 [+9684bp] C - 12 T vs. C 0.4 (T) 0.342 (C) >1 (-) 0 (-) >0.05
rs16856160 chr1:205661367 SLC45A3 [+11780bp] C - 13 A vs. G 0.075 (G) - <1 (-) 0 (-) >0.05
rs7542712 chr1:205664544 SLC45A3 [+14957bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs6593958 chr1:205602553 ELK4 [+1463bp] C - 13 A vs. G 0.467 (G) 0.283 (G) <1 (-) 0 (-) >0.05
rs4245717 chr1:205595753 ELK4 C - 13 T vs. C 0.042 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs10900521 chr1:205663956 SLC45A3 [+14369bp] C - 13 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs75486294 chr1:205692044 NUCKS1 C - 12 A vs. G 0.033 (G) - >1 (-) 0 (-) >0.05
rs6593959 chr1:205602677 ELK4 [+1587bp] C - 13 A vs. G 0.467 (A) 0.283 (A) 1 (-) 0 (-) >0.05
rs17347787 chr1:205628308 SLC45A3 C - 13 A vs. G 0.067 (A) - 1 (-) 0 (-) >0.05

Association studies for this region [+]