SLC50A1, chr1:155107820-155111329 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs35749011 chr1:155135036 KRTCAP2 [-6848bp] All: C 104,595 13 G vs. A - - 0.57 (0.51-0.64) 0 (0-23) 6.10e-23
Meta_image?name=rs35749011

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7365736 chr1:155089883 EFNA1 [-10053bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs72702284 chr1:155079718 EFNA3 [+19704bp] C - 12 A vs. G 0.058 (A) - >1 (-) 36 (-) >0.05
rs11807418 chr1:155094605 EFNA1 [-5331bp] C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs12145362 chr1:155094013 EFNA1 [-5923bp] C - 13 A vs. C 0.4 (A) 0.075 (C) <1 (-) 0 (-) >0.05
rs11264327 chr1:155095107 EFNA1 [-4829bp] C - 13 A vs. G 0.4 (A) 0.083 (G) <1 (-) 0 (-) >0.05
rs7366138 chr1:155088350 EFNA1 [-11586bp] C - 13 A vs. G 0.4 (A) 0.067 (G) <1 (-) 0 (-) >0.05
rs6694256 chr1:155106768 EFNA1 C - 12 T vs. C 0.033 (C) - >1 (-) 22 (-) >0.05
rs11264323 chr1:155090105 EFNA1 [-9831bp] C - 13 T vs. C 0.383 (C) 0.05 (T) >1 (-) 0 (-) >0.05
rs150417359 chr1:155119746 RNU7-150P [+3938bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs146924705 chr1:155082567 EFNA1 [-17369bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs144486053 chr1:155109973 SLC50A1 C - 5 T vs. G - - >1 (-) 0 (-) >0.05
rs4971101 chr1:155157635 TRIM46 [+188bp] C - 12 A vs. G 0.458 (A) 0.217 (G) >1 (-) 11 (-) >0.05
rs11809549 chr1:155143399 KRTCAP2 C - 7 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs2070803 chr1:155157715 TRIM46 [+268bp] C - 12 A vs. G 0.458 (G) 0.192 (A) <1 (-) 9 (-) >0.05
rs34542979 chr1:155133421 KRTCAP2 [-8463bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs34106167 chr1:155129965 KRTCAP2 [-11919bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs10157792 chr1:155119845 RNU7-150P [+4037bp] C - 11 A vs. T 0.417 (A) 0.317 (T) <1 (-) 63 (-) >0.05
rs9426886 chr1:155151754 TRIM46 C - 12 A vs. T 0.458 (T) 0.2 (A) <1 (-) 18 (-) >0.05
rs151256463 chr1:155119641 RNU7-150P [+3833bp] C - 6 C vs. G - - >1 (-) 0 (-) >0.05
rs11264341 chr1:155151493 TRIM46 C - 12 T vs. C 0.458 (T) 0.258 (C) >1 (-) 18 (-) >0.05
rs144875396 chr1:155141857 KRTCAP2 [-27bp] C - 5 T vs. C - - <1 (-) 18 (-) >0.05
chr1:155152763 chr1:155152763 TRIM46 C - 8 A vs. C - - <1 (-) 3 (-) >0.05
rs4971099 chr1:155155608 TRIM46 C - 12 A vs. G - - <1 (-) 2 (-) >0.05
rs12743084 chr1:155161168 MUC1 C - 13 C vs. G - - <1 (-) 2 (-) >0.05
rs6676150 chr1:155123837 RNU7-150P [+8029bp] C - 13 C vs. G - - <1 (-) 1 (-) >0.05
rs112556683 chr1:155089801 EFNA1 [-10135bp] C - 10 C vs. G 0.05 (C) - >1 (-) 17 (-) >0.05
rs146343509 chr1:155062025 EFNA3 [+2011bp] C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs74774418 chr1:155111409 SLC50A1 [+80bp] C - 12 A vs. G 0.058 (A) - <1 (-) 42 (-) >0.05
rs147368691 chr1:155078038 EFNA3 [+18024bp] C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs4971091 chr1:155143768 KRTCAP2 C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs114540418 chr1:155127360 RNU7-150P [+11552bp] C - 9 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs114413971 chr1:155140023 KRTCAP2 [-1861bp] C - 11 A vs. C - - <1 (-) 5 (-) >0.05
rs4971092 chr1:155143946 KRTCAP2 C - 12 T vs. C 0.142 (C) 0.0 (C) <1 (-) 37 (-) >0.05
rs11582489 chr1:155134919 KRTCAP2 [-6965bp] C - 12 A vs. G 0.042 (A) - <1 (-) 24 (-) >0.05
rs75589050 chr1:155065859 EFNA3 [+5845bp] C - 8 A vs. C - - >1 (-) 0 (-) >0.05
rs4971093 chr1:155144300 KRTCAP2 C - 13 A vs. G 0.4 (A) 0.192 (G) >1 (-) 0 (-) >0.05
rs12752585 chr1:155135406 KRTCAP2 [-6478bp] C - 13 A vs. G 0.475 (G) 0.192 (G) >1 (-) 0 (-) >0.05
rs4460629 chr1:155135335 KRTCAP2 [-6549bp] C - 13 T vs. C 0.475 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs4971059 chr1:155148781 TRIM46 C - 13 A vs. G 0.367 (A) 0.192 (G) >1 (-) 0 (-) >0.05
rs4971066 chr1:155105882 EFNA1 C - 13 T vs. G 0.158 (G) 0.117 (T) >1 (-) 13 (-) >0.05
rs4971085 chr1:155138222 KRTCAP2 [-3662bp] C - 13 T vs. C 0.492 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs113314132 chr1:155094189 EFNA1 [-5747bp] C - 13 A vs. G - - >1 (-) 38 (-) >0.05
rs11264337 chr1:155138450 KRTCAP2 [-3434bp] C - 13 T vs. C 0.475 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs115543519 chr1:155083834 EFNA1 [-16102bp] C - 11 A vs. T 0.058 (T) - <1 (-) 40 (-) >0.05
rs113461732 chr1:155094213 EFNA1 [-5723bp] C - 13 T vs. C - - >1 (-) 38 (-) >0.05
rs11584422 chr1:155083360 EFNA1 [-16576bp] C - 11 A vs. G 0.058 (A) - >1 (-) 40 (-) >0.05
rs148970520 chr1:155130617 KRTCAP2 [-11267bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs113485477 chr1:155117977 RNU7-150P [+2169bp] C - 12 T vs. G - - <1 (-) 43 (-) >0.05
rs141942982 chr1:155137395 KRTCAP2 [-4489bp] C - 13 T vs. G - - <1 (-) 40 (-) >0.05
rs111508230 chr1:155153537 TRIM46 C - 13 T vs. C - - <1 (-) 45 (-) >0.05

Association studies for this region [+]