SNCA, chr4:90645250-90759466 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs356182 chr4:90626111 SNCA [-19139bp] All: C 120,238 21 G vs. A 0.417 (G) 0.375 (A) 1.34 (1.30-1.38) 50 (17-70) 1.85e-82
Meta_image?name=rs356182

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs356198 chr4:90682504 SNCA All: C 108,990 15 T vs. C 0.1 (T) 0.033 (T) 0.80 (0.77-0.84) 0 (0-51) 5.12e-23
rs356197 chr4:90682750 SNCA All: C 108,990 15 A vs. G 0.108 (A) 0.033 (A) 0.80 (0.77-0.84) 0 (0-51) 5.36e-23
rs356196 chr4:90682803 SNCA All: C 108,990 15 T vs. A 0.108 (T) - 0.80 (0.77-0.84) 0 (0-51) 5.93e-23
rs1372518 chr4:90757294 SNCA All: C 108,990 15 A vs. C 0.142 (A) 0.108 (A) 0.82 (0.79-0.85) 0 (0-23) 7.83e-23
rs356179 chr4:90628439 SNCA [-16811bp] All: C 108,990 15 C vs. G 0.342 (C) 0.067 (C) 1.19 (1.15-1.23) 38 (0-67) 9.65e-23
rs1372519 chr4:90757309 SNCA All: C 108,990 15 A vs. G 0.142 (A) 0.108 (A) 0.82 (0.79-0.86) 0 (0-22) 1.71e-22
rs1372520 chr4:90757505 SNCA All: C 108,990 15 T vs. C 0.15 (T) 0.1 (T) 0.82 (0.79-0.86) 0 (0-22) 1.75e-22
rs168550 chr4:90685632 SNCA All: C 108,990 15 G vs. C - - 1.25 (1.20-1.31) 16 (0-54) 3.24e-22
rs2737002 chr4:90753180 SNCA All: C 108,990 15 A vs. G 0.117 (A) 0.1 (A) 0.82 (0.79-0.85) 0 (0-39) 6.38e-22
rs2245801 chr4:90757840 SNCA All: C 108,990 15 T vs. C 0.142 (T) 0.092 (T) 0.82 (0.79-0.86) 0 (0-24) 6.95e-22
rs2583962 chr4:90713747 SNCA All: C 108,990 15 C vs. T - - 1.22 (1.17-1.27) 0 (0-48) 7.05e-22
rs1471484 chr4:90754313 SNCA All: C 108,990 15 C vs. T 0.117 (C) 0.1 (C) 0.82 (0.79-0.85) 0 (0-38) 7.26e-22
rs990085 chr4:90754771 SNCA All: C 108,990 15 A vs. G 0.117 (A) 0.1 (A) 0.82 (0.79-0.85) 0 (0-38) 9.05e-22
rs356199 chr4:90682327 SNCA All: C 108,990 15 G vs. A 0.333 (G) 0.0 (G) 1.18 (1.14-1.22) 12 (0-50) 1.41e-21
rs356195 chr4:90683168 SNCA All: C 108,990 15 T vs. C 0.325 (T) 0.0 (T) 1.18 (1.14-1.22) 11 (0-49) 1.73e-21
rs2583963 chr4:90727088 SNCA All: C 108,990 15 C vs. T 0.125 (C) 0.075 (C) 0.82 (0.79-0.86) 0 (0-44) 1.88e-21
rs2197120 chr4:90729602 SNCA All: C 108,990 15 A vs. G 0.125 (A) 0.1 (A) 0.82 (0.79-0.86) 0 (0-44) 2.20e-21
rs2619368 chr4:90729747 SNCA All: C 108,990 15 T vs. G 0.125 (T) 0.1 (T) 0.82 (0.79-0.86) 0 (0-44) 2.23e-21
rs2572318 chr4:90718719 SNCA All: C 108,990 15 C vs. T 0.125 (C) 0.1 (C) 0.82 (0.79-0.86) 0 (0-45) 2.28e-21
rs2583964 chr4:90727218 SNCA All: C 108,990 15 A vs. G 0.133 (A) 0.1 (A) 0.82 (0.79-0.86) 0 (0-44) 2.28e-21
rs2737030 chr4:90710099 SNCA All: C 108,990 15 C vs. T 0.125 (C) 0.1 (C) 0.82 (0.79-0.86) 0 (0-44) 2.29e-21
rs2737025 chr4:90719192 SNCA All: C 108,990 15 A vs. G 0.133 (A) 0.1 (A) 0.82 (0.79-0.86) 0 (0-45) 2.38e-21
rs2737021 chr4:90739992 SNCA All: C 108,990 15 T vs. A 0.142 (T) 0.1 (T) 0.82 (0.79-0.86) 0 (0-44) 2.46e-21
rs2619347 chr4:90745770 SNCA All: C 108,990 15 G vs. A 0.125 (G) 0.1 (G) 0.82 (0.79-0.86) 0 (0-47) 4.23e-21
rs2737010 chr4:90746466 SNCA All: C 108,990 15 G vs. A 0.125 (G) 0.1 (G) 0.82 (0.79-0.86) 0 (0-47) 4.24e-21
rs2619349 chr4:90746646 SNCA All: C 108,990 15 G vs. T 0.125 (G) 0.1 (G) 0.82 (0.79-0.86) 0 (0-47) 4.30e-21
rs3113355 chr4:90745345 SNCA All: C 108,990 15 A vs. T 0.125 (A) 0.1 (A) 0.82 (0.79-0.86) 0 (0-47) 4.52e-21
rs1811442 chr4:90747751 SNCA All: C 108,990 15 C vs. T 0.125 (C) 0.1 (C) 0.83 (0.79-0.86) 0 (0-49) 5.49e-21
rs356187 chr4:90692468 SNCA All: C 108,990 15 T vs. C 0.325 (T) 0.0 (T) 1.18 (1.14-1.22) 10 (0-48) 5.75e-21
rs356188 chr4:90691537 SNCA All: C 108,990 15 C vs. T 0.125 (C) 0.1 (C) 0.82 (0.79-0.86) 0 (0-44) 6.21e-21
rs2619341 chr4:90741773 SNCA All: C 108,990 15 A vs. G 0.125 (A) 0.108 (A) 0.82 (0.79-0.86) 0 (0-44) 7.08e-21
rs34806123 chr4:90684122 SNCA All: C 108,990 15 G vs. A 0.1 (G) 0.483 (A) 1.45 (1.34-1.57) 0 (0-37) 7.74e-21
rs35495602 chr4:90684123 SNCA All: C 108,990 15 G vs. A 0.1 (G) 0.483 (A) 1.45 (1.34-1.57) 0 (0-37) 7.84e-21
rs2619355 chr4:90748374 SNCA All: C 108,990 15 A vs. C 0.125 (A) 0.092 (A) 0.83 (0.79-0.86) 0 (0-49) 7.94e-21
rs356192 chr4:90687927 SNCA All: C 108,990 15 G vs. A 0.317 (G) 0.0 (G) 1.18 (1.14-1.22) 13 (0-51) 8.02e-21
rs1442148 chr4:90748846 SNCA All: C 108,990 15 T vs. A 0.125 (T) 0.1 (T) 0.83 (0.79-0.86) 0 (0-49) 8.40e-21
rs2583979 chr4:90750588 SNCA All: C 108,990 15 A vs. T 0.125 (A) 0.092 (A) 0.83 (0.79-0.86) 0 (0-49) 9.49e-21
rs2583978 chr4:90750326 SNCA All: C 108,990 15 A vs. C 0.125 (A) 0.1 (A) 0.83 (0.79-0.86) 0 (0-50) 9.76e-21
rs184810 chr4:90697979 SNCA All: C 108,990 15 C vs. T 0.125 (C) 0.1 (C) 0.82 (0.79-0.86) 0 (0-46) 1.38e-20
rs356163 chr4:90696827 SNCA All: C 108,990 15 A vs. C 0.317 (A) - 1.18 (1.14-1.22) 10 (0-48) 1.50e-20
rs356191 chr4:90688120 SNCA All: C 108,990 15 A vs. G 0.125 (A) 0.1 (A) 0.83 (0.79-0.86) 0 (0-47) 2.04e-20
rs356162 chr4:90697157 SNCA All: C 108,990 15 C vs. T 0.125 (C) 0.108 (C) 0.83 (0.79-0.86) 0 (0-49) 2.08e-20
rs2583972 chr4:90747411 SNCA All: C 108,990 15 T vs. G 0.15 (T) 0.092 (T) 0.83 (0.80-0.86) 0 (0-48) 2.61e-20
rs356184 chr4:90703233 SNCA All: C 108,990 15 A vs. G 0.317 (A) 0.0 (A) 1.17 (1.14-1.22) 7 (0-43) 3.07e-20
rs356185 chr4:90704617 SNCA All: C 108,990 15 A vs. G 0.317 (A) - 1.17 (1.13-1.21) 7 (0-43) 3.79e-20
rs2737033 chr4:90707947 SNCA All: C 108,990 15 C vs. T 0.317 (C) - 1.17 (1.13-1.21) 5 (0-56) 4.55e-20
rs983361 chr4:90761944 SNCA [+2478bp] All: C 108,990 15 T vs. G 0.15 (T) 0.092 (T) 0.83 (0.80-0.87) 0 (0-20) 9.28e-20
rs35897584 chr4:90742692 SNCA All: C 108,990 15 G vs. A 0.083 (G) 0.333 (G) 1.33 (1.25-1.42) 0 (0-49) 3.52e-19
rs2737028 chr4:90717016 SNCA All: C 108,990 15 A vs. G 0.142 (A) 0.1 (A) 0.83 (0.80-0.87) 0 (0-43) 3.94e-19
rs6830383 chr4:90745113 SNCA All: C 108,990 15 A vs. C - - 0.76 (0.71-0.81) 5 (0-56) 9.07e-19

Association studies for this region [+]