SNCA, chr4:90645250-90759466 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs356182 chr4:90626111 SNCA [-19139bp] All: C 120,238 21 G vs. A 0.417 (G) 0.375 (A) 1.34 (1.30-1.38) 50 (17-70) 1.85e-82
Meta_image?name=rs356182

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2583971 chr4:90747207 SNCA All: C 108,990 15 T vs. C 0.317 (T) - 1.17 (1.13-1.21) 6 (0-57) 7.13e-17
rs74402838 chr4:90779710 SNCA [+20244bp] All: C 108,990 15 A vs. G 0.067 (A) 0.275 (A) 1.34 (1.25-1.43) 0 (0-35) 7.94e-17
rs78942105 chr4:90755403 SNCA All: C 108,990 15 C vs. T 0.067 (C) - 1.42 (1.31-1.55) 0 (0-43) 8.40e-17
rs2619344 chr4:90744248 SNCA All: C 108,990 15 C vs. T - - 0.86 (0.83-0.89) 0 (0-47) 8.72e-17
rs2737008 chr4:90747183 SNCA All: C 108,990 15 A vs. G 0.317 (A) - 1.16 (1.12-1.21) 7 (0-43) 1.01e-16
rs13142587 chr4:90750169 SNCA All: C 108,990 15 T vs. G 0.317 (T) - 1.17 (1.13-1.21) 12 (0-50) 1.64e-16
rs2583976 chr4:90750173 SNCA All: C 108,990 15 C vs. T 0.317 (C) - 1.17 (1.13-1.21) 12 (0-50) 1.64e-16
rs28532850 chr4:90632935 SNCA [-12315bp] All: C 108,990 15 A vs. G 0.058 (A) - 1.49 (1.36-1.64) 7 (0-57) 1.81e-16
rs78806632 chr4:90775280 SNCA [+15814bp] All: C 108,990 15 C vs. T 0.058 (C) - 1.36 (1.26-1.47) 0 (0-46) 2.40e-16
rs79334889 chr4:90769349 SNCA [+9883bp] All: C 108,990 15 A vs. G 0.05 (A) - 1.36 (1.26-1.46) 0 (0-46) 2.47e-16
rs2619351 chr4:90747704 SNCA All: C 108,990 15 G vs. A 0.292 (G) - 1.16 (1.12-1.21) 3 (0-55) 2.80e-16
rs2619352 chr4:90747709 SNCA All: C 108,990 15 T vs. C 0.283 (T) - 1.16 (1.12-1.21) 3 (0-55) 2.81e-16
rs2583965 chr4:90740103 SNCA All: C 107,386 14 T vs. G 0.308 (T) - 1.16 (1.12-1.20) 2 (0-56) 3.05e-16
rs78945589 chr4:90764621 SNCA [+5155bp] All: C 108,990 15 G vs. A 0.058 (G) - 1.36 (1.26-1.46) 0 (0-45) 3.09e-16
rs77476544 chr4:90775398 SNCA [+15932bp] All: C 108,990 15 C vs. A 0.058 (C) - 1.36 (1.26-1.46) 0 (0-45) 3.17e-16
rs3822090 chr4:90704876 SNCA All: C 108,990 15 T vs. C 0.142 (T) 0.467 (C) 1.21 (1.16-1.27) 8 (0-45) 3.43e-16
rs2583990 chr4:90771499 SNCA [+12033bp] All: C 108,990 15 A vs. G 0.15 (A) 0.1 (A) 0.85 (0.82-0.89) 0 (0-50) 4.37e-16
rs3822089 chr4:90704011 SNCA All: C 108,990 15 A vs. G 0.142 (A) 0.475 (G) 1.23 (1.17-1.29) 11 (0-49) 4.62e-16
rs2619360 chr4:90756191 SNCA All: C 108,990 15 T vs. C 0.317 (T) - 1.15 (1.11-1.19) 1 (0-54) 4.84e-16
rs2583961 chr4:90779758 SNCA [+20292bp] All: C 108,990 15 A vs. G 0.167 (A) 0.083 (A) 0.85 (0.82-0.89) 0 (0-47) 4.88e-16
rs79093919 chr4:90781022 MMRN1 [-19661bp] All: C 108,990 15 G vs. T 0.058 (G) - 1.36 (1.26-1.46) 0 (0-46) 4.95e-16
rs2737026 chr4:90779823 SNCA [+20357bp] All: C 108,990 15 A vs. G 0.15 (A) 0.083 (A) 0.85 (0.82-0.89) 0 (0-47) 5.02e-16
rs112475116 chr4:90774436 SNCA [+14970bp] All: C 108,990 15 C vs. T - - 0.71 (0.66-0.77) 0 (0-45) 5.40e-16
rs59852608 chr4:90780629 MMRN1 [-20054bp] All: C 108,990 15 C vs. G 0.058 (C) - 1.37 (1.27-1.48) 0 (0-41) 6.19e-16
rs2736989 chr4:90776257 SNCA [+16791bp] All: C 108,990 15 T vs. C 0.15 (T) 0.1 (T) 0.85 (0.82-0.89) 0 (0-49) 7.74e-16
rs77244248 chr4:90809346 MMRN1 All: C 108,990 15 C vs. T 0.058 (C) - 1.35 (1.26-1.46) 0 (0-46) 9.49e-16
rs17016235 chr4:90737879 SNCA All: C 102,085 14 C vs. G 0.083 (C) 0.342 (C) 1.32 (1.23-1.41) 10 (0-48) 9.72e-16
rs116344822 chr4:90809007 MMRN1 All: C 108,990 15 A vs. G 0.058 (A) - 1.35 (1.26-1.45) 0 (0-46) 1.22e-15
rs78153704 chr4:90808661 MMRN1 All: C 108,990 15 A vs. T 0.058 (A) - 1.35 (1.26-1.45) 0 (0-46) 1.22e-15
rs74601458 chr4:90805553 MMRN1 All: C 108,990 15 A vs. C 0.058 (A) - 1.35 (1.25-1.45) 0 (0-46) 1.33e-15
rs75329999 chr4:90803031 MMRN1 All: C 108,990 15 G vs. A 0.058 (G) - 1.35 (1.25-1.45) 0 (0-46) 1.33e-15
rs75856065 chr4:90804078 MMRN1 All: C 108,990 15 T vs. C 0.05 (T) - 1.35 (1.25-1.45) 0 (0-46) 1.33e-15
rs76572204 chr4:90799451 MMRN1 [-1232bp] All: C 108,990 15 A vs. G 0.058 (A) - 1.35 (1.25-1.45) 0 (0-46) 1.33e-15
rs77825017 chr4:90806200 MMRN1 All: C 108,990 15 G vs. A 0.058 (G) - 1.35 (1.26-1.45) 0 (0-46) 1.33e-15
rs78598237 chr4:90801175 MMRN1 All: C 108,990 15 T vs. C 0.058 (T) - 1.35 (1.25-1.45) 0 (0-46) 1.33e-15
rs3933594 chr4:90636419 SNCA [-8831bp] All: C 108,990 15 G vs. A - - 0.82 (0.78-0.86) 0 (0-33) 1.44e-15
rs2583988 chr4:90760828 SNCA [+1362bp] All: C 108,990 15 T vs. C 0.308 (T) - 1.15 (1.11-1.19) 0 (0-52) 2.00e-15
rs2619364 chr4:90759887 SNCA [+421bp] All: C 108,990 15 G vs. A 0.308 (G) - 1.15 (1.11-1.19) 0 (0-52) 2.00e-15
rs2619366 chr4:90763260 SNCA [+3794bp] All: C 108,990 15 G vs. A 0.308 (G) - 1.15 (1.11-1.19) 0 (0-53) 2.00e-15
rs2583987 chr4:90760221 SNCA [+755bp] All: C 108,990 15 C vs. A 0.308 (C) - 1.15 (1.11-1.19) 0 (0-53) 2.11e-15
rs2583989 chr4:90769422 SNCA [+9956bp] All: C 108,990 15 G vs. A 0.308 (G) - 1.15 (1.11-1.19) 3 (0-55) 2.22e-15
rs2736995 chr4:90762197 SNCA [+2731bp] All: C 108,990 15 C vs. A 0.308 (C) - 1.15 (1.11-1.19) 0 (0-52) 2.33e-15
rs9999231 chr4:90637425 SNCA [-7825bp] All: C 108,990 15 C vs. T 0.108 (C) 0.45 (T) 1.22 (1.16-1.29) 0 (0-31) 2.44e-15
rs1551980 chr4:90774724 SNCA [+15258bp] All: C 108,990 15 A vs. G 0.308 (A) - 1.15 (1.11-1.19) 5 (0-56) 2.66e-15
rs2736993 chr4:90772851 SNCA [+13385bp] All: C 108,990 15 C vs. A 0.308 (C) - 1.15 (1.11-1.19) 2 (0-54) 2.66e-15
rs2737035 chr4:90777213 SNCA [+17747bp] All: C 108,990 15 T vs. C 0.308 (T) - 1.15 (1.11-1.19) 7 (0-43) 2.66e-15
rs115027723 chr4:90809058 MMRN1 All: C 108,990 15 C vs. A 0.058 (C) - 1.37 (1.27-1.48) 0 (0-42) 2.89e-15
rs2736988 chr4:90776345 SNCA [+16879bp] All: C 108,990 15 T vs. C 0.308 (T) - 1.15 (1.11-1.19) 7 (0-44) 2.89e-15
rs2165614 chr4:90805724 MMRN1 All: C 108,990 15 C vs. A 0.308 (C) - 1.15 (1.11-1.19) 8 (0-45) 3.33e-15
rs2619340 chr4:90779518 SNCA [+20052bp] All: C 108,990 15 G vs. C - - 0.87 (0.84-0.90) 6 (0-56) 3.33e-15

Association studies for this region [+]