SNCA, chr4:90645250-90759466 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs356182 chr4:90626111 SNCA [-19139bp] All: C 120,238 21 G vs. A 0.417 (G) 0.375 (A) 1.34 (1.30-1.38) 50 (17-70) 1.85e-82
Meta_image?name=rs356182

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2619367 chr4:90767095 SNCA [+7629bp] All: C 108,990 15 C vs. A 0.308 (C) - 1.15 (1.11-1.19) 1 (0-54) 3.55e-15
rs2583960 chr4:90724869 SNCA All: C 106,157 14 G vs. A 0.183 (G) 0.283 (G) 0.86 (0.83-0.89) 25 (0-61) 4.00e-15
rs6822088 chr4:90764310 SNCA [+4844bp] All: C 108,990 15 C vs. T 0.133 (C) 0.475 (T) 1.20 (1.15-1.26) 6 (0-56) 4.88e-15
rs2736994 chr4:90784528 MMRN1 [-16155bp] All: C 108,990 15 A vs. G 0.133 (A) 0.217 (A) 0.85 (0.82-0.89) 0 (0-39) 5.00e-15
rs10028575 chr4:90788196 MMRN1 [-12487bp] All: C 108,990 15 C vs. T - - 1.17 (1.13-1.22) 0 (0-42) 6.22e-15
rs3775439 chr4:90709741 SNCA All: C 108,990 15 A vs. G 0.142 (A) 0.475 (G) 1.20 (1.15-1.26) 11 (0-49) 6.33e-15
rs6830166 chr4:90744993 SNCA All: C 108,990 15 C vs. T - - 0.83 (0.80-0.87) 11 (0-49) 6.33e-15
rs2619339 chr4:90777468 SNCA [+18002bp] All: C 108,990 15 C vs. G 0.308 (C) - 1.15 (1.11-1.19) 9 (0-47) 6.66e-15
rs2737034 chr4:90777464 SNCA [+17998bp] All: C 108,990 15 G vs. C 0.308 (G) - 1.15 (1.11-1.19) 9 (0-47) 6.66e-15
rs67876224 chr4:90808918 MMRN1 All: C 108,990 15 C vs. T 0.3 (C) - 1.15 (1.11-1.19) 9 (0-46) 1.11e-14
rs1837890 chr4:90736006 SNCA All: C 108,990 15 A vs. C 0.183 (A) 0.283 (A) 0.87 (0.84-0.90) 31 (0-63) 1.88e-14
rs1442143 chr4:90736024 SNCA All: C 108,990 15 A vs. T 0.183 (A) 0.283 (A) 0.87 (0.84-0.90) 31 (0-63) 1.92e-14
rs972880 chr4:90739255 SNCA All: C 108,990 15 A vs. G 0.183 (A) 0.283 (A) 0.87 (0.84-0.90) 31 (0-63) 2.11e-14
rs1442145 chr4:90736923 SNCA All: C 108,990 15 G vs. A 0.183 (G) 0.283 (G) 0.87 (0.84-0.90) 31 (0-63) 2.13e-14
rs2619372 chr4:90736727 SNCA All: C 108,990 15 A vs. G 0.183 (A) 0.283 (A) 0.87 (0.84-0.90) 31 (0-63) 2.18e-14
rs3775434 chr4:90702781 SNCA All: C 108,990 15 G vs. A 0.142 (G) 0.475 (A) 1.20 (1.14-1.26) 14 (0-52) 2.90e-14
rs142059155 chr4:90661018 SNCA All: C 99,532 13 G vs. A - - 1.60 (1.41-1.81) 41 (0-69) 1.95e-13
rs2737020 chr4:90740878 SNCA All: C 107,386 14 G vs. A 0.183 (G) 0.283 (G) 0.87 (0.84-0.91) 34 (0-65) 2.71e-13
rs76106880 chr4:90774082 SNCA [+14616bp] All: C 108,544 14 T vs. A 0.058 (T) - 1.47 (1.32-1.63) 0 (0-36) 6.32e-13
rs55932807 chr4:90753339 SNCA All: C 96,250 12 T vs. A 0.033 (T) - 1.40 (1.27-1.53) 38 (0-69) 1.89e-12
rs10014396 chr4:90712629 SNCA All: C 108,990 15 C vs. T 0.142 (C) 0.175 (C) 1.19 (1.13-1.25) 6 (0-56) 2.24e-12
rs73831836 chr4:90806717 MMRN1 All: C 108,990 15 G vs. T 0.092 (G) 0.267 (G) 1.23 (1.16-1.30) 14 (0-52) 3.19e-12
rs151186370 chr4:90700236 SNCA All: C 108,990 15 T vs. C - - 0.67 (0.60-0.75) 0 (0-53) 3.50e-12
rs72657784 chr4:90788943 MMRN1 [-11740bp] All: C 96,250 12 A vs. G 0.067 (A) - 1.38 (1.26-1.51) 40 (0-70) 3.52e-12
rs79438231 chr4:90800258 MMRN1 [-425bp] All: C 108,990 15 T vs. A 0.092 (T) 0.258 (T) 1.23 (1.16-1.30) 2 (0-55) 3.52e-12
rs3910105 chr4:90682571 SNCA All: C 108,990 15 G vs. A 0.458 (G) 0.442 (G) 0.89 (0.86-0.92) 0 (0-17) 3.71e-12
rs10002435 chr4:90712511 SNCA All: C 108,990 15 G vs. A - - 0.84 (0.80-0.88) 4 (0-55) 4.36e-12
rs72657790 chr4:90806547 MMRN1 All: C 96,250 12 A vs. T 0.042 (A) - 1.38 (1.26-1.51) 40 (0-69) 5.10e-12
rs59559246 chr4:90792765 MMRN1 [-7918bp] All: C 108,990 15 G vs. A 0.075 (G) 0.267 (G) 1.23 (1.16-1.31) 16 (0-53) 7.43e-12
rs10018362 chr4:90703753 SNCA All: C 108,990 15 C vs. T 0.125 (C) 0.183 (C) 1.19 (1.13-1.25) 15 (0-53) 7.52e-12
rs10516849 chr4:90789539 MMRN1 [-11144bp] All: C 108,990 15 G vs. A 0.092 (G) 0.267 (G) 1.22 (1.15-1.29) 0 (0-54) 1.08e-11
rs17016299 chr4:90786665 MMRN1 [-14018bp] All: C 108,990 15 A vs. C 0.092 (A) 0.267 (A) 1.22 (1.15-1.29) 1 (0-54) 1.13e-11
rs7697331 chr4:90600999 SNCA [-44251bp] All: C 108,990 15 A vs. G 0.075 (A) 0.2 (A) 1.21 (1.15-1.28) 0 (0-8) 1.15e-11
rs112645122 chr4:90681236 SNCA All: C 99,532 13 C vs. A 0.025 (C) - 0.66 (0.58-0.74) 35 (0-67) 1.32e-11
rs79392886 chr4:90754441 SNCA All: C 108,990 15 T vs. A 0.008 (T) - 0.68 (0.61-0.76) 17 (0-54) 1.36e-11
rs6848483 chr4:90796613 MMRN1 [-4070bp] All: C 108,990 15 A vs. T 0.092 (A) 0.275 (A) 1.22 (1.15-1.29) 5 (0-56) 1.63e-11
rs73831827 chr4:90794942 MMRN1 [-5741bp] All: C 108,990 15 A vs. G 0.092 (A) 0.267 (A) 1.22 (1.15-1.29) 2 (0-55) 1.76e-11
rs11727074 chr4:90795281 MMRN1 [-5402bp] All: C 108,990 15 C vs. T 0.092 (C) 0.267 (C) 1.22 (1.15-1.29) 2 (0-55) 1.81e-11
rs11721779 chr4:90795356 MMRN1 [-5327bp] All: C 108,990 15 C vs. T 0.092 (C) 0.267 (C) 1.22 (1.15-1.29) 2 (0-55) 1.85e-11
rs6828095 chr4:90807512 MMRN1 All: C 108,990 15 A vs. G 0.092 (A) 0.267 (A) 1.21 (1.15-1.29) 4 (0-55) 1.95e-11
rs6848022 chr4:90803635 MMRN1 All: C 108,990 15 C vs. T 0.092 (C) 0.267 (C) 1.21 (1.15-1.28) 3 (0-55) 2.26e-11
rs59559279 chr4:90799072 MMRN1 [-1611bp] All: C 108,990 15 T vs. C 0.092 (T) - 1.22 (1.15-1.29) 3 (0-55) 2.60e-11
rs2619357 chr4:90752205 SNCA All: C 108,990 15 T vs. C 0.1 (T) 0.008 (T) 0.84 (0.80-0.89) 0 (0-44) 5.46e-11
rs6532197 chr4:90797301 MMRN1 [-3382bp] All: C 106,157 14 G vs. A 0.092 (G) 0.267 (G) 1.22 (1.15-1.29) 10 (0-48) 6.87e-11
rs70963043 chr4:90723787 SNCA All: C 108,990 15 C vs. T - - 0.72 (0.65-0.79) 0 (0-46) 6.95e-11
rs12640100 chr4:90634212 SNCA [-11038bp] All: C 108,990 15 A vs. G 0.033 (A) 0.5 (A) 1.36 (1.24-1.50) 0 (0-52) 3.18e-10
rs12648141 chr4:90654154 SNCA All: C 108,990 15 G vs. C 0.033 (G) 0.5 (G) 1.35 (1.23-1.48) 0 (0-51) 4.10e-10
rs4122861 chr4:90631947 SNCA [-13303bp] All: C 108,990 15 A vs. C 0.033 (A) 0.475 (A) 1.36 (1.24-1.50) 0 (0-48) 4.38e-10
rs3775424 chr4:90665256 SNCA All: C 108,990 15 T vs. C 0.033 (T) 0.5 (T) 1.35 (1.23-1.48) 0 (0-52) 4.68e-10
rs71609573 chr4:90624593 SNCA [-20657bp] All: C 95,137 11 C vs. T 0.025 (C) - 1.64 (1.40-1.91) 28 (0-64) 4.91e-10

Association studies for this region [+]