SNCA, chr4:90645250-90759466 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs356182 chr4:90626111 SNCA [-19139bp] All: C 120,238 21 G vs. A 0.417 (G) 0.375 (A) 1.34 (1.30-1.38) 50 (17-70) 1.85e-82
Meta_image?name=rs356182

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs80215036 chr4:90747671 SNCA All: C 105,273 13 G vs. C 0.067 (G) - 1.67 (1.42-1.97) 0 (0-30) 1.00e-09
rs3857047 chr4:90606518 SNCA [-38732bp] All: C 108,990 15 G vs. T 0.058 (G) - 0.86 (0.82-0.90) 40 (0-68) 1.12e-09
rs3910104 chr4:90690748 SNCA All: C 108,990 15 T vs. C 0.408 (T) 0.383 (T) 0.90 (0.87-0.93) 0 (-) 1.23e-09
rs35541731 chr4:90653348 SNCA All: C 108,990 15 T vs. C 0.008 (T) 0.5 (T) 1.36 (1.23-1.51) 0 (0-51) 1.27e-09
rs116227916 chr4:90763239 SNCA [+3773bp] All: C 108,990 15 G vs. A 0.008 (G) - 0.75 (0.68-0.82) 0 (0-54) 1.34e-09
rs80283803 chr4:90764891 SNCA [+5425bp] All: C 108,990 15 A vs. G 0.008 (A) - 0.75 (0.68-0.82) 0 (0-53) 1.67e-09
rs17180453 chr4:90653134 SNCA All: C 103,024 13 T vs. C 0.058 (T) - 1.32 (1.21-1.45) 24 (0-61) 2.34e-09
rs12502363 chr4:90713064 SNCA All: C 108,990 15 A vs. G 0.417 (A) 0.375 (A) 0.91 (0.88-0.94) 0 (-) 2.68e-09
rs11097234 chr4:90713330 SNCA All: C 108,990 15 G vs. C 0.417 (G) 0.375 (G) 0.91 (0.88-0.94) 0 (-) 2.74e-09
rs62306284 chr4:90642531 SNCA [-2719bp] All: C 94,570 11 G vs. A 0.033 (G) - 0.81 (0.75-0.87) 0 (0-45) 3.15e-09
rs78110639 chr4:90610884 SNCA [-34366bp] All: C 99,521 13 A vs. T - - 1.49 (1.30-1.70) 28 (0-63) 4.77e-09
rs7675105 chr4:90644960 SNCA [-290bp] All: C 94,570 11 T vs. C 0.033 (T) - 0.80 (0.75-0.87) 0 (0-46) 1.21e-08
rs75234410 chr4:90742418 SNCA All: C 37,306 12 G vs. A - - 0.72 (0.65-0.81) 11 (0-51) 1.54e-08
chr4:90742427 chr4:90742427 SNCA C - 12 A vs. G - - >1 (-) 11 (-) <5.00e-08
rs12644119 chr4:90603419 SNCA [-41831bp] All: C 108,990 15 A vs. C 0.133 (A) 0.492 (A) 1.15 (1.10-1.21) 0 (0-35) 1.63e-08
rs17016330 chr4:90803192 MMRN1 All: C 108,990 15 C vs. T - - 1.32 (1.19-1.45) 19 (0-56) 4.02e-08
rs11097238 chr4:90746709 SNCA All: C 108,990 15 T vs. C 0.417 (T) 0.375 (T) 0.91 (0.88-0.94) 0 (-) 4.13e-08
rs12642514 chr4:90629397 SNCA [-15853bp] C - 13 A vs. C 0.033 (C) 0.492 (C) <1 (-) 0 (-) <1.00e-06
rs3796665 chr4:90748710 SNCA All: C 108,990 15 A vs. G 0.425 (A) 0.392 (A) 0.91 (0.89-0.94) 0 (-) 5.89e-08
rs7356297 chr4:90746329 SNCA All: C 108,990 15 C vs. T 0.425 (C) 0.375 (C) 0.91 (0.89-0.94) 0 (-) 5.90e-08
rs10433953 chr4:90698964 SNCA All: C 108,990 15 G vs. T - - 0.76 (0.69-0.84) 0 (0-48) 7.21e-08
rs6848726 chr4:90722871 SNCA All: C 108,990 15 T vs. C 0.425 (T) 0.375 (T) 0.92 (0.89-0.95) 0 (-) 8.68e-08
rs2119787 chr4:90734728 SNCA All: C 108,990 15 G vs. A 0.425 (G) 0.375 (G) 0.92 (0.89-0.95) 0 (-) 8.69e-08
rs72503734 chr4:90699779 SNCA All: C 108,990 15 C vs. T 0.025 (C) 0.475 (T) 1.32 (1.19-1.46) 0 (0-47) 9.44e-08
rs3822095 chr4:90736517 SNCA All: C 103,470 14 C vs. T 0.425 (C) 0.367 (C) 0.92 (0.89-0.95) 0 (-) 1.10e-07
rs2572319 chr4:90700329 SNCA All: C 88,392 8 C vs. T 0.05 (C) - 1.35 (1.20-1.52) 48 (0-77) 7.14e-07
rs10025824 chr4:90781538 MMRN1 [-19145bp] All: C 108,990 15 C vs. T 0.408 (C) 0.375 (C) 0.92 (0.89-0.95) 0 (-) 7.88e-07
rs10516848 chr4:90775212 SNCA [+15746bp] All: C 108,990 15 G vs. A 0.408 (G) 0.367 (G) 0.92 (0.89-0.95) 0 (-) 9.04e-07
rs77164054 chr4:90738148 SNCA C - 11 A vs. T 0.017 (A) - <1 (-) 15 (-) <1.00e-06
rs113177203 chr4:90755239 SNCA All: C 32,922 10 A vs. G 0.017 (A) - 0.56 (0.44-0.71) 26 (0-64) 9.25e-07
rs10030935 chr4:90767433 SNCA [+7967bp] All: C 108,990 15 T vs. C 0.408 (T) 0.367 (T) 0.92 (0.89-0.95) 0 (-) 1.14e-06
rs7678651 chr4:90768371 SNCA [+8905bp] All: C 108,990 15 A vs. C 0.408 (A) 0.367 (A) 0.92 (0.89-0.95) 0 (-) 1.14e-06
rs1023777 chr4:90761412 SNCA [+1946bp] All: C 108,990 15 C vs. T 0.408 (C) 0.367 (C) 0.92 (0.89-0.95) 0 (-) 1.29e-06
rs2737032 chr4:90709169 SNCA C - 13 A vs. G 0.117 (G) 0.025 (G) >1 (-) 0 (-) <1.00e-04
rs62305157 chr4:90595639 SNCA [-49611bp] All: C 108,990 15 A vs. G 0.05 (A) - 0.85 (0.80-0.91) 50 (10-72) 1.35e-06
rs356164 chr4:90693476 SNCA C - 13 C vs. G 0.1 (G) - >1 (-) 0 (-) <1.00e-04
rs111578789 chr4:90774120 SNCA [+14654bp] All: C 32,922 10 C vs. T 0.017 (C) - 0.57 (0.45-0.71) 25 (0-64) 1.48e-06
rs12643708 chr4:90773770 SNCA [+14304bp] All: C 106,227 14 A vs. C 0.408 (A) 0.367 (A) 0.92 (0.89-0.95) 0 (-) 1.49e-06
rs6841476 chr4:90772697 SNCA [+13231bp] All: C 108,990 15 C vs. T 0.408 (C) - 0.92 (0.89-0.95) 0 (-) 1.51e-06
rs6532183 chr4:90606054 SNCA [-39196bp] All: C 108,990 15 G vs. A 0.05 (G) 0.05 (G) 0.86 (0.80-0.91) 54 (18-75) 1.71e-06
rs77018683 chr4:90627526 SNCA [-17724bp] C - 12 A vs. T 0.017 (T) - <1 (-) 8 (-) <1.00e-04
rs115094427 chr4:90597902 SNCA [-47348bp] All: C 108,990 15 T vs. C 0.05 (T) - 0.86 (0.80-0.91) 53 (16-74) 2.39e-06
rs137950536 chr4:90597600 SNCA [-47650bp] All: C 108,990 15 T vs. C - - 1.17 (1.10-1.25) 53 (16-74) 2.39e-06
rs146203477 chr4:90597501 SNCA [-47749bp] All: C 108,990 15 A vs. G - - 1.17 (1.10-1.25) 53 (16-74) 2.40e-06
rs4449381 chr4:90596628 SNCA [-48622bp] All: C 108,990 15 A vs. G - - 1.17 (1.10-1.25) 53 (16-74) 2.42e-06
rs72884405 chr4:90596153 SNCA [-49097bp] All: C 108,990 15 T vs. G 0.042 (T) - 0.86 (0.80-0.91) 53 (16-74) 2.44e-06
rs17015982 chr4:90603044 SNCA [-42206bp] All: C 108,990 15 G vs. A 0.05 (G) 0.058 (G) 0.86 (0.80-0.91) 53 (16-74) 2.50e-06
rs7437342 chr4:90597132 SNCA [-48118bp] All: C 108,990 15 A vs. G - - 1.18 (1.10-1.26) 52 (13-73) 2.77e-06
rs2882783 chr4:90596890 SNCA [-48360bp] C - 13 A vs. T - - >1 (-) 56 (-) <1.00e-04
rs3775427 chr4:90687119 SNCA C - 13 A vs. G 0.033 (A) 0.483 (G) >1 (-) 0 (-) <1.00e-04

Association studies for this region [+]