SNCA, chr4:90645250-90759466 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs356182 chr4:90626111 SNCA [-19139bp] All: C 120,238 21 G vs. A 0.417 (G) 0.375 (A) 1.34 (1.30-1.38) 50 (17-70) 1.85e-82
Meta_image?name=rs356182

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3796661 chr4:90687507 SNCA C - 13 T vs. C 0.033 (T) 0.483 (C) >1 (-) 0 (-) <1.00e-04
rs115413951 chr4:90784640 MMRN1 [-16043bp] All: C 108,990 15 C vs. T 0.017 (C) - 0.80 (0.73-0.88) 0 (0-45) 3.76e-06
rs3857046 chr4:90600771 SNCA [-44479bp] All: C 108,990 15 A vs. G 0.05 (A) 0.058 (A) 0.86 (0.80-0.92) 54 (18-74) 4.47e-06
rs2619365 chr4:90762019 SNCA [+2553bp] All: C 91,155 9 A vs. G 0.05 (A) - 1.43 (1.22-1.66) 34 (0-69) 5.54e-06
rs62305158 chr4:90595817 SNCA [-49433bp] All: C 108,990 15 A vs. G - - 1.16 (1.09-1.24) 50 (10-72) 6.62e-06
rs17015985 chr4:90603210 SNCA [-42040bp] All: C 108,990 15 A vs. G 0.05 (A) 0.058 (A) 0.86 (0.81-0.92) 53 (15-74) 6.81e-06
rs4122858 chr4:90596515 SNCA [-48735bp] All: C 108,990 15 C vs. A 0.05 (C) - 0.85 (0.80-0.92) 54 (17-74) 8.73e-06
rs7656703 chr4:90601889 SNCA [-43361bp] All: C 108,990 15 G vs. A 0.05 (G) 0.058 (G) 0.83 (0.77-0.90) 41 (0-68) 8.79e-06
rs4122859 chr4:90596176 SNCA [-49074bp] All: C 108,990 15 C vs. T 0.05 (C) 0.067 (C) 0.86 (0.80-0.92) 53 (15-74) 1.09e-05
rs7682447 chr4:90598311 SNCA [-46939bp] All: C 108,990 15 A vs. C - - 1.17 (1.09-1.25) 52 (13-73) 1.16e-05
rs2619369 chr4:90733669 SNCA All: C 88,392 8 G vs. A 0.033 (G) - 1.31 (1.16-1.47) 33 (0-70) 1.34e-05
rs13108925 chr4:90602795 SNCA [-42455bp] All: C 99,521 13 C vs. T 0.25 (C) 0.325 (C) 0.90 (0.86-0.94) 0 (0-37) 1.36e-05
rs17016305 chr4:90791381 MMRN1 [-9302bp] All: C 108,990 15 G vs. A 0.483 (G) 0.492 (A) 0.93 (0.90-0.96) 0 (0-37) 1.55e-05
rs7693616 chr4:90792230 MMRN1 [-8453bp] All: C 108,990 15 G vs. T 0.467 (G) 0.492 (T) 0.93 (0.90-0.96) 0 (0-36) 1.61e-05
rs28796128 chr4:90787905 MMRN1 [-12778bp] All: C 108,990 15 C vs. T - - 1.07 (1.04-1.11) 0 (0-41) 1.64e-05
rs10213062 chr4:90600620 SNCA [-44630bp] All: C 108,990 15 C vs. T 0.108 (C) 0.358 (C) 0.89 (0.84-0.94) 34 (0-64) 1.65e-05
rs114828194 chr4:90804532 MMRN1 C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) <1.00e-04
rs11942911 chr4:90601310 SNCA [-43940bp] C - 13 A vs. G 0.075 (G) - <1 (-) 0 (-) <1.00e-04
rs62306262 chr4:90598165 SNCA [-47085bp] C - 13 A vs. T 0.042 (T) 0.033 (T) >1 (-) 55 (-) <1.00e-04
rs7683289 chr4:90598763 SNCA [-46487bp] All: C 108,990 15 A vs. C - - 1.13 (1.07-1.19) 36 (0-66) 1.96e-05
rs3857048 chr4:90608959 SNCA [-36291bp] All: C 108,990 15 T vs. C 0.133 (T) 0.058 (T) 0.90 (0.85-0.94) 43 (0-69) 2.03e-05
rs6814481 chr4:90805660 MMRN1 All: C 108,990 15 T vs. C 0.467 (T) 0.492 (C) 0.94 (0.91-0.97) 0 (0-37) 3.24e-05
rs74390872 chr4:90619032 SNCA [-26218bp] All: C 105,041 14 T vs. C 0.008 (T) 0.183 (T) 1.35 (1.17-1.56) 16 (0-55) 3.32e-05
rs11941682 chr4:90804316 MMRN1 All: C 108,990 15 G vs. T 0.458 (G) 0.492 (T) 0.94 (0.91-0.97) 0 (0-39) 3.37e-05
rs17015990 chr4:90604322 SNCA [-40928bp] All: C 108,990 15 T vs. C 0.05 (T) 0.058 (T) 0.87 (0.81-0.93) 51 (11-73) 3.73e-05
rs6815691 chr4:90772489 SNCA [+13023bp] All: C 108,990 15 G vs. A - - 1.07 (1.04-1.11) 0 (-) 4.25e-05
rs3906628 chr4:90618526 SNCA [-26724bp] All: C 108,990 15 A vs. G 0.125 (A) 0.058 (A) 0.90 (0.85-0.95) 45 (0-70) 5.16e-05
rs11097239 chr4:90795804 MMRN1 [-4879bp] All: C 108,990 15 A vs. C 0.417 (A) 0.492 (C) 0.94 (0.91-0.97) 0 (0-45) 6.33e-05
rs141076413 chr4:90715805 SNCA All: C 105,041 14 T vs. C - - 1.40 (1.19-1.65) 0 (-) 6.79e-05
rs35479630 chr4:90742296 SNCA All: C 105,041 14 A vs. G 0.017 (A) - 0.72 (0.61-0.85) 0 (-) 7.13e-05
rs78679014 chr4:90738839 SNCA All: C 105,041 14 G vs. T 0.017 (G) - 0.72 (0.61-0.85) 0 (-) 7.14e-05
rs62306261 chr4:90598008 SNCA [-47242bp] All: C 108,990 15 G vs. A - - 1.16 (1.08-1.25) 46 (0-70) 9.08e-05
rs116233499 chr4:90641016 SNCA [-4234bp] All: C 105,041 14 T vs. C 0.017 (T) - 1.35 (1.16-1.57) 27 (0-62) 9.23e-05
rs3857050 chr4:90625419 SNCA [-19831bp] All: C 108,990 15 C vs. T 0.133 (C) 0.058 (C) 0.91 (0.86-0.95) 44 (0-70) 1.08e-04
rs10155475 chr4:90738158 SNCA C - 13 C vs. G 0.425 (C) 0.358 (C) <1 (-) 0 (-) <0.05
rs34674090 chr4:90648686 SNCA All: C 105,041 14 G vs. A 0.008 (G) - 1.35 (1.16-1.57) 25 (0-61) 1.35e-04
rs7356228 chr4:90743855 SNCA C - 13 C vs. G 0.425 (G) 0.375 (G) >1 (-) 0 (-) <0.05
rs6812245 chr4:90625714 SNCA [-19536bp] C - 13 A vs. T 0.083 (A) 0.05 (A) <1 (-) 61 (-) <0.05
rs78565744 chr4:90631007 SNCA [-14243bp] C - 6 T vs. C 0.042 (T) - >1 (-) 0 (-) <0.05
rs10029694 chr4:90607077 SNCA [-38173bp] C - 13 C vs. G 0.133 (C) 0.058 (C) <1 (-) 47 (-) <0.05
rs12649704 chr4:90773800 SNCA [+14334bp] C - 13 A vs. T 0.4 (T) 0.367 (T) >1 (-) 0 (-) <0.05
rs33978842 chr4:90718390 SNCA C - 13 C vs. G 0.092 (C) - >1 (-) 0 (-) <0.05
rs765517 chr4:90768889 SNCA [+9423bp] C - 13 A vs. T 0.408 (A) 0.367 (A) <1 (-) 0 (-) <0.05
rs147165312 chr4:90739861 SNCA C - 10 A vs. T - - <1 (-) 1 (-) <0.05
rs1871399 chr4:90783545 MMRN1 [-17138bp] C - 13 C vs. G 0.408 (G) 0.383 (G) >1 (-) 0 (-) <0.05
rs17016251 chr4:90742639 SNCA C - 13 C vs. G 0.483 (C) 0.417 (G) <1 (-) 0 (-) <0.05
rs10009760 chr4:90762622 SNCA [+3156bp] C - 13 A vs. T 0.408 (T) 0.367 (T) >1 (-) 0 (-) <0.05
rs74347922 chr4:90649383 SNCA C - 11 A vs. G 0.017 (G) 0.167 (G) <1 (-) 0 (-) <0.05
rs6824468 chr4:90767210 SNCA [+7744bp] C - 11 T vs. G - - <1 (-) 0 (-) <0.05
rs2351860 chr4:90597048 SNCA [-48202bp] C - 13 C vs. G - - <1 (-) 42 (-) <0.05

Association studies for this region [+]