SPAST, chr2:32288680-32382706 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs212742 chr2:32408629 SLC30A6 All: C 108,990 15 C vs. T - - 1.08 (1.04-1.12) 0 (0-38) 1.61e-05
Meta_image?name=rs212742

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs212742 chr2:32408629 SLC30A6 All: C 108,990 15 C vs. T - - 1.08 (1.04-1.12) 0 (0-38) 1.61e-05
rs212754 chr2:32421628 SLC30A6 All: C 108,990 15 A vs. G 0.225 (A) 0.433 (A) 0.93 (0.89-0.96) 0 (0-47) 1.77e-05
rs212747 chr2:32414704 SLC30A6 All: C 108,990 15 A vs. G 0.258 (A) 0.433 (A) 0.93 (0.89-0.96) 0 (0-49) 2.07e-05
rs375050 chr2:32413765 SLC30A6 All: C 108,990 15 C vs. T 0.217 (C) 0.425 (C) 0.93 (0.89-0.96) 0 (0-48) 2.36e-05
rs12611678 chr2:32347785 SPAST All: C 108,990 15 A vs. G 0.267 (A) 0.392 (G) 0.93 (0.89-0.96) 0 (0-43) 2.81e-05
rs11683110 chr2:32349813 SPAST All: C 108,990 15 C vs. T 0.267 (C) 0.392 (T) 0.93 (0.90-0.96) 0 (0-35) 2.90e-05
rs34197800 chr2:32389646 SLC30A6 [-1287bp] All: C 108,990 15 A vs. C 0.217 (A) 0.483 (A) 0.93 (0.90-0.96) 0 (0-43) 3.22e-05
rs13017027 chr2:32291903 SPAST All: C 108,990 15 T vs. C 0.183 (T) 0.333 (T) 0.92 (0.89-0.96) 0 (0-46) 3.47e-05
rs11691939 chr2:32339561 SPAST All: C 108,990 15 T vs. C 0.217 (T) 0.483 (T) 0.93 (0.90-0.96) 0 (0-44) 3.70e-05
rs7574000 chr2:32342888 SPAST All: C 108,990 15 C vs. A 0.208 (C) 0.475 (C) 0.93 (0.90-0.96) 0 (0-44) 3.73e-05
rs13006880 chr2:32355539 SPAST All: C 108,990 15 G vs. A - - 1.08 (1.04-1.12) 0 (0-46) 3.92e-05
rs2280968 chr2:32290040 SPAST All: C 108,990 15 T vs. G 0.217 (T) 0.458 (T) 0.93 (0.90-0.96) 0 (0-38) 3.97e-05
rs13006495 chr2:32355490 SPAST All: C 108,990 15 T vs. C 0.217 (T) 0.475 (T) 0.93 (0.90-0.96) 0 (0-45) 4.12e-05
rs7556942 chr2:32295694 SPAST All: C 108,990 15 A vs. G 0.217 (A) 0.458 (A) 0.93 (0.90-0.96) 0 (0-38) 4.23e-05
rs56322034 chr2:32353013 SPAST All: C 108,990 15 C vs. T 0.217 (C) 0.467 (C) 0.93 (0.90-0.96) 0 (0-45) 4.27e-05
rs2294178 chr2:32353324 SPAST All: C 108,990 15 A vs. C - - 1.08 (1.04-1.12) 0 (0-45) 4.28e-05
rs13013695 chr2:32391231 SLC30A6 All: C 108,990 15 A vs. G 0.175 (A) 0.475 (A) 0.93 (0.89-0.96) 0 (0-46) 4.32e-05
rs6756085 chr2:32336522 SPAST All: C 108,990 15 G vs. A 0.217 (G) - 0.93 (0.90-0.96) 0 (0-31) 4.32e-05
rs35978916 chr2:32400635 SLC30A6 All: C 108,990 15 C vs. T 0.225 (C) 0.425 (C) 0.93 (0.89-0.96) 0 (0-44) 4.44e-05
rs7592239 chr2:32370258 SPAST All: C 108,990 15 A vs. C 0.267 (A) 0.392 (C) 0.93 (0.90-0.96) 0 (0-53) 4.49e-05
rs12991444 chr2:32265125 DPY30 [+244bp] All: C 108,990 15 T vs. G 0.217 (T) 0.458 (T) 0.93 (0.90-0.96) 0 (0-42) 4.81e-05
rs2366547 chr2:32251109 DPY30 All: C 108,990 15 A vs. G 0.217 (A) 0.475 (A) 0.93 (0.90-0.96) 0 (0-42) 5.00e-05
rs6543648 chr2:32330314 SPAST All: C 108,990 15 G vs. A - - 1.08 (1.04-1.12) 0 (0-39) 5.47e-05
rs12468012 chr2:32256381 DPY30 All: C 108,990 15 C vs. A - - 1.08 (1.04-1.12) 0 (0-42) 5.80e-05
rs3769605 chr2:32322456 SPAST All: C 108,990 15 G vs. A 0.225 (G) 0.467 (G) 0.93 (0.90-0.96) 0 (0-36) 7.04e-05
rs11676456 chr2:32331511 SPAST All: C 108,990 15 G vs. A 0.15 (G) 0.392 (G) 0.92 (0.88-0.96) 0 (0-45) 8.06e-05
rs2280972 chr2:32377961 SPAST All: C 108,990 15 T vs. C 0.2 (T) 0.367 (T) 0.93 (0.89-0.96) 0 (0-52) 9.14e-05
rs11683760 chr2:32364093 SPAST All: C 108,990 15 T vs. C 0.267 (T) 0.392 (C) 0.94 (0.90-0.97) 0 (0-46) 1.39e-04
rs11694630 chr2:32376201 SPAST All: C 108,990 15 A vs. G 0.267 (A) - 0.94 (0.91-0.97) 0 (0-38) 2.01e-04
rs7569264 chr2:32316921 SPAST All: C 108,990 15 C vs. A 0.192 (C) 0.383 (C) 0.93 (0.89-0.97) 0 (0-52) 3.05e-04
rs212761 chr2:32429288 SLC30A6 All: C 108,990 15 T vs. C 0.225 (T) 0.458 (T) 0.94 (0.90-0.97) 21 (0-57) 5.16e-04
rs12618002 chr2:32347715 SPAST C - 13 A vs. T 0.258 (T) 0.392 (A) >1 (-) 0 (-) <0.05
rs12996943 chr2:32373645 SPAST C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs114503498 chr2:32306502 SPAST C - 13 A vs. G 0.025 (A) - >1 (-) 8 (-) <0.05
rs212751 chr2:32418808 SLC30A6 C - 13 A vs. T 0.217 (T) 0.433 (T) >1 (-) 0 (-) <0.05
rs34474809 chr2:32318374 SPAST C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs12712326 chr2:32384194 SPAST [+1488bp] C - 13 C vs. G 0.133 (G) - <1 (-) 0 (-) <0.05
rs13428933 chr2:32358864 SPAST C - 13 A vs. C 0.125 (C) - <1 (-) 0 (-) <0.05
rs75288589 chr2:32355214 SPAST C - 13 A vs. G 0.142 (G) - <1 (-) 0 (-) <0.05
rs17011801 chr2:32298072 SPAST C - 13 A vs. T 0.217 (T) 0.458 (T) >1 (-) 0 (-) <0.05
rs138464378 chr2:32248852 DPY30 C - 3 T vs. C - - >1 (-) 82 (-) <0.05
rs34835885 chr2:32325414 SPAST C - 13 A vs. G 0.225 (A) 0.383 (A) <1 (-) 0 (-) <0.05
rs13425083 chr2:32357588 SPAST C - 13 A vs. G 0.125 (G) - <1 (-) 0 (-) <0.05
rs7596656 chr2:32364735 SPAST C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs146818181 chr2:32407746 SLC30A6 C - 4 A vs. C - - <1 (-) 0 (-) <0.05
rs35196278 chr2:32258536 DPY30 C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs3769602 chr2:32381829 SPAST C - 13 A vs. G 0.267 (A) 0.375 (G) <1 (-) 0 (-) <0.05
rs34976640 chr2:32373514 SPAST C - 13 T vs. G - - <1 (-) 0 (-) <0.05
rs7572964 chr2:32372096 SPAST C - 13 A vs. T 0.267 (T) 0.392 (A) >1 (-) 0 (-) <0.05
rs3769603 chr2:32360887 SPAST C - 13 T vs. G 0.225 (T) - <1 (-) 0 (-) <0.05

Association studies for this region [+]