SPAST, chr2:32288680-32382706 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs212742 chr2:32408629 SLC30A6 All: C 108,990 15 C vs. T - - 1.08 (1.04-1.12) 0 (0-38) 1.61e-05
Meta_image?name=rs212742

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79921196 chr2:32364213 SPAST C - 13 T vs. G 0.05 (G) - <1 (-) 0 (-) >0.05
rs4519572 chr2:32384375 SPAST [+1669bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs216544 chr2:32318806 SPAST C - 13 A vs. G 0.367 (A) 0.408 (G) <1 (-) 0 (-) >0.05
rs72863940 chr2:32394674 SLC30A6 C - 13 T vs. C 0.408 (T) 0.392 (C) <1 (-) 0 (-) >0.05
rs4952252 chr2:32382961 SPAST [+255bp] C - 13 T vs. C 0.4 (C) 0.375 (T) >1 (-) 0 (-) >0.05
rs2886394 chr2:32337010 SPAST C - 7 A vs. T 0.017 (T) - >1 (-) 0 (-) >0.05
rs116362351 chr2:32408475 SLC30A6 C - 13 T vs. C 0.042 (T) - <1 (-) 16 (-) >0.05
rs72493393 chr2:32353155 SPAST C - 13 T vs. C 0.05 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs212738 chr2:32403322 SLC30A6 C - 13 A vs. T 0.408 (T) 0.392 (A) >1 (-) 0 (-) >0.05
rs28394079 chr2:32336434 SPAST C - 6 A vs. C 0.042 (C) - >1 (-) 0 (-) >0.05
rs78926455 chr2:32344688 SPAST C - 12 T vs. G 0.042 (G) - >1 (-) 53 (-) >0.05
rs76027085 chr2:32403311 SLC30A6 C - 3 T vs. C - - >1 (-) 82 (-) >0.05
rs11676475 chr2:32389190 SLC30A6 [-1743bp] C - 13 T vs. C 0.4 (T) 0.408 (C) <1 (-) 0 (-) >0.05
rs678251 chr2:32250361 DPY30 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs146060544 chr2:32273240 DPY30 [+8359bp] C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs6716179 chr2:32393076 SLC30A6 C - 13 A vs. C 0.4 (A) 0.383 (C) <1 (-) 0 (-) >0.05
rs142098079 chr2:32367593 SPAST C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs141211816 chr2:32313644 SPAST C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs140803144 chr2:32402779 SLC30A6 C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs116366987 chr2:32417845 SLC30A6 C - 4 T vs. C 0.008 (T) - <1 (-) 0 (-) >0.05
rs78871913 chr2:32296134 SPAST C - 11 C vs. G 0.017 (C) - <1 (-) 39 (-) >0.05
rs12997026 chr2:32394307 SLC30A6 C - 13 A vs. T 0.4 (T) 0.392 (A) >1 (-) 0 (-) >0.05
rs212756 chr2:32424288 SLC30A6 C - 13 A vs. G 0.392 (A) 0.467 (A) <1 (-) 0 (-) >0.05
rs534993 chr2:32244821 DPY30 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs212752 chr2:32419903 SLC30A6 C - 13 T vs. C 0.383 (T) 0.458 (T) <1 (-) 0 (-) >0.05
rs62142121 chr2:32394392 SLC30A6 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs148749808 chr2:32427357 SLC30A6 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs146067341 chr2:32427027 SLC30A6 C - 10 T vs. G - - >1 (-) 0 (-) >0.05
rs146367647 chr2:32427731 SLC30A6 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs151126637 chr2:32428448 SLC30A6 C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs144272217 chr2:32313928 SPAST C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs4952207 chr2:32383078 SPAST [+372bp] C - 13 T vs. C 0.342 (T) 0.483 (C) <1 (-) 0 (-) >0.05
rs144787144 chr2:32287180 SPAST [-1500bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2280973 chr2:32378604 SPAST C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs72796885 chr2:32432200 SLC30A6 C - 8 A vs. T 0.025 (A) - <1 (-) 0 (-) >0.05
rs6733481 chr2:32390834 SLC30A6 [-99bp] C - 13 A vs. C 0.083 (C) - >1 (-) 14 (-) >0.05
rs144047842 chr2:32330747 SPAST C - 13 T vs. C - - <1 (-) 16 (-) >0.05
rs56272862 chr2:32379663 SPAST C - 11 A vs. G 0.075 (G) - <1 (-) 11 (-) >0.05
rs72796871 chr2:32393157 SLC30A6 C - 11 A vs. G 0.083 (A) - >1 (-) 11 (-) >0.05
rs6543652 chr2:32400764 SLC30A6 C - 5 A vs. G 0.008 (A) 0.0 (A) >1 (-) 0 (-) >0.05
rs116794237 chr2:32363711 SPAST C - 5 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs143272442 chr2:32338434 SPAST C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs147721392 chr2:32381715 SPAST C - 11 C vs. G - - >1 (-) 0 (-) >0.05
rs12474598 chr2:32390368 SLC30A6 [-565bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs4258846 chr2:32402636 SLC30A6 C - 13 T vs. C - 0.392 (T) <1 (-) 0 (-) >0.05
rs6543651 chr2:32365022 SPAST C - 6 A vs. G 0.017 (G) 0.0 (G) >1 (-) 0 (-) >0.05
rs149742165 chr2:32293827 SPAST C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs212750 chr2:32417022 SLC30A6 C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs141901048 chr2:32319337 SPAST C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs76909380 chr2:32387508 SLC30A6 [-3425bp] C - 5 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05

Association studies for this region [+]