SPON2, chr4:1160720-1202750 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76717949 chr4:1169612 SPON2 C - 8 A vs. G - 0.042 (A) >1 (-) 48 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7671502 chr4:1127010 RNF212 [+19660bp] C - 13 A vs. G 0.417 (A) 0.383 (A) >1 (-) 0 (-) >0.05
rs146213255 chr4:1140531 SPON2 [-20189bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs142386097 chr4:1225144 CTBP1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs1250092 chr4:1210654 CTBP1 C - 13 A vs. G 0.35 (G) 0.25 (G) >1 (-) 0 (-) >0.05
rs6836952 chr4:1166009 SPON2 C - 4 T vs. C 0.017 (T) 0.0 (T) >1 (-) 6 (-) >0.05
rs900020 chr4:1222302 CTBP1 C - 13 A vs. G 0.158 (G) 0.375 (G) <1 (-) 0 (-) >0.05
rs2878539 chr4:1243877 CTBP1 [+136bp] C - 13 T vs. C 0.425 (T) 0.392 (T) >1 (-) 15 (-) >0.05
rs1680056 chr4:1220583 CTBP1 C - 13 A vs. C 0.358 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs730831 chr4:1240299 CTBP1 C - 13 T vs. G 0.025 (G) 0.292 (G) <1 (-) 45 (-) >0.05
rs79407053 chr4:1244218 CTBP1 [+477bp] C - 13 A vs. G - 0.308 (A) >1 (-) 44 (-) >0.05
rs144150451 chr4:1226479 CTBP1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs4974564 chr4:1138334 SPON2 [-22386bp] C - 13 A vs. G 0.333 (G) 0.242 (G) >1 (-) 20 (-) >0.05
rs1481168 chr4:1124000 RNF212 [+16650bp] C - 3 C vs. G - - <1 (-) 60 (-) >0.05
rs3755930 chr4:1237014 CTBP1 C - 11 T vs. C 0.217 (C) 0.275 (C) >1 (-) 61 (-) >0.05
rs76650972 chr4:1185716 SPON2 C - 13 A vs. C 0.075 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs28545482 chr4:1186903 SPON2 C - 13 T vs. C 0.083 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs1250111 chr4:1225795 CTBP1 C - 13 A vs. G 0.15 (G) 0.383 (G) <1 (-) 0 (-) >0.05
rs1250109 chr4:1227951 CTBP1 C - 13 T vs. C 0.15 (C) 0.375 (C) <1 (-) 0 (-) >0.05
rs12508446 chr4:1198957 SPON2 C - 13 T vs. C 0.475 (T) 0.492 (T) >1 (-) 0 (-) >0.05
rs7691582 chr4:1137432 SPON2 [-23288bp] C - 3 T vs. C 0.0 (T) 0.0 (T) >1 (-) 59 (-) >0.05
rs4336168 chr4:1137906 SPON2 [-22814bp] C - 3 T vs. C 0.008 (T) 0.0 (T) >1 (-) 59 (-) >0.05
rs4246689 chr4:1138117 SPON2 [-22603bp] C - 3 T vs. G - - <1 (-) 59 (-) >0.05
rs111340627 chr4:1191699 SPON2 C - 13 A vs. G 0.1 (A) - <1 (-) 0 (-) >0.05
rs2127908 chr4:1128925 RNF212 [+21575bp] C - 13 T vs. C 0.333 (C) 0.25 (C) >1 (-) 24 (-) >0.05
rs1250091 chr4:1212186 CTBP1 C - 13 T vs. C 0.35 (T) 0.242 (T) <1 (-) 25 (-) >0.05
rs6836809 chr4:1150780 SPON2 [-9940bp] C - 3 A vs. C - - <1 (-) 58 (-) >0.05
rs2127911 chr4:1151348 SPON2 [-9372bp] C - 3 T vs. C 0.017 (T) 0.0 (T) >1 (-) 58 (-) >0.05
rs58848442 chr4:1212292 CTBP1 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs4974627 chr4:1129975 RNF212 [+22625bp] C - 13 C vs. G 0.333 (C) 0.25 (C) <1 (-) 24 (-) >0.05
rs35637542 chr4:1140414 SPON2 [-20306bp] C - 13 A vs. G - - >1 (-) 27 (-) >0.05
rs13132174 chr4:1133382 RNF212 [+26032bp] C - 13 C vs. G 0.342 (G) 0.242 (G) >1 (-) 25 (-) >0.05
rs6826705 chr4:1122634 RNF212 [+15284bp] C - 13 A vs. G 0.333 (A) 0.242 (A) <1 (-) 22 (-) >0.05
rs80061036 chr4:1211788 CTBP1 C - 11 A vs. G 0.058 (A) - <1 (-) 40 (-) >0.05
rs6821834 chr4:1234490 CTBP1 C - 13 A vs. G 0.358 (G) 0.25 (G) >1 (-) 0 (-) >0.05
rs2335855 chr4:1237968 CTBP1 C - 13 T vs. C 0.492 (C) 0.408 (C) <1 (-) 11 (-) >0.05
rs3755924 chr4:1238363 CTBP1 C - 13 A vs. G 0.492 (G) 0.408 (G) <1 (-) 11 (-) >0.05
rs3733338 chr4:1241472 CTBP1 C - 13 A vs. G 0.492 (A) 0.425 (A) >1 (-) 10 (-) >0.05
rs1564508 chr4:1244879 CTBP1 [+1138bp] C - 13 A vs. G 0.492 (G) 0.408 (G) <1 (-) 10 (-) >0.05
rs4974541 chr4:1244037 CTBP1 [+296bp] C - 13 A vs. G 0.492 (G) 0.408 (G) <1 (-) 10 (-) >0.05
rs4974629 chr4:1135350 SPON2 [-25370bp] C - 13 A vs. G 0.333 (A) 0.242 (A) <1 (-) 29 (-) >0.05
rs35376712 chr4:1223124 CTBP1 C - 13 A vs. G 0.35 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs4368552 chr4:1128054 RNF212 [+20704bp] C - 13 T vs. C - - >1 (-) 22 (-) >0.05
rs3775094 chr4:1238859 CTBP1 C - 13 A vs. G 0.492 (A) 0.408 (A) >1 (-) 11 (-) >0.05
rs3755931 chr4:1236840 CTBP1 C - 12 T vs. C - 0.15 (T) >1 (-) 42 (-) >0.05
rs3822017 chr4:1236312 CTBP1 C - 13 T vs. C 0.475 (T) 0.408 (T) >1 (-) 11 (-) >0.05
rs2279281 chr4:1245277 CTBP1 [+1536bp] C - 13 T vs. G 0.492 (G) 0.408 (G) <1 (-) 11 (-) >0.05
rs1265922 chr4:1212454 CTBP1 C - 13 T vs. C 0.283 (T) 0.225 (T) <1 (-) 25 (-) >0.05
rs963598 chr4:1147333 SPON2 [-13387bp] C - 13 A vs. C 0.333 (C) 0.242 (C) >1 (-) 24 (-) >0.05
rs76042814 chr4:1125683 RNF212 [+18333bp] C - 13 C vs. G 0.05 (G) 0.083 (G) >1 (-) 50 (-) >0.05
rs1564509 chr4:1236562 CTBP1 C - 13 C vs. G 0.475 (G) 0.408 (G) <1 (-) 11 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.