SPON2, chr4:1160720-1202750 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76717949 chr4:1169612 SPON2 C - 8 A vs. G - 0.042 (A) >1 (-) 48 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79519929 chr4:1134993 SPON2 [-25727bp] C - 13 T vs. C 0.05 (C) 0.075 (C) >1 (-) 49 (-) >0.05
rs77273904 chr4:1136249 SPON2 [-24471bp] C - 13 C vs. G 0.05 (C) 0.083 (C) <1 (-) 49 (-) >0.05
rs79741357 chr4:1135672 SPON2 [-25048bp] C - 13 C vs. G 0.05 (G) 0.083 (G) >1 (-) 49 (-) >0.05
rs12505896 chr4:1171863 SPON2 C - 13 T vs. C - - >1 (-) 23 (-) >0.05
rs17164362 chr4:1129795 RNF212 [+22445bp] C - 13 T vs. C 0.05 (C) 0.083 (C) >1 (-) 48 (-) >0.05
rs1250118 chr4:1224046 CTBP1 C - 13 A vs. G 0.35 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs11723211 chr4:1146108 SPON2 [-14612bp] C - 13 A vs. T 0.05 (A) 0.083 (A) <1 (-) 49 (-) >0.05
rs79373812 chr4:1149810 SPON2 [-10910bp] C - 13 A vs. C 0.05 (A) 0.083 (A) <1 (-) 49 (-) >0.05
rs4974562 chr4:1138137 SPON2 [-22583bp] C - 13 T vs. C - - >1 (-) 25 (-) >0.05
rs76874714 chr4:1118883 RNF212 [+11533bp] C - 13 A vs. G 0.05 (A) 0.083 (A) <1 (-) 49 (-) >0.05
rs79314138 chr4:1126899 RNF212 [+19549bp] C - 13 A vs. G 0.05 (G) 0.083 (G) >1 (-) 49 (-) >0.05
rs76965348 chr4:1122450 RNF212 [+15100bp] C - 13 T vs. C 0.05 (T) 0.083 (T) <1 (-) 48 (-) >0.05
rs10013662 chr4:1157140 SPON2 [-3580bp] C - 3 T vs. C 0.0 (T) 0.0 (T) >1 (-) 56 (-) >0.05
rs112293379 chr4:1122062 RNF212 [+14712bp] C - 13 A vs. C 0.05 (C) 0.083 (C) >1 (-) 49 (-) >0.05
rs11726675 chr4:1125124 RNF212 [+17774bp] C - 13 A vs. G 0.05 (G) 0.083 (G) >1 (-) 49 (-) >0.05
rs144936321 chr4:1112157 RNF212 [+4807bp] C - 13 T vs. C - - >1 (-) 49 (-) >0.05
rs2242279 chr4:1165587 SPON2 C - 13 C vs. G 0.225 (G) 0.25 (G) >1 (-) 0 (-) >0.05
rs11735226 chr4:1121508 RNF212 [+14158bp] C - 13 T vs. C 0.05 (T) 0.083 (T) <1 (-) 49 (-) >0.05
rs78628528 chr4:1111677 RNF212 [+4327bp] C - 13 A vs. G 0.042 (A) 0.083 (A) <1 (-) 49 (-) >0.05
rs79686408 chr4:1242214 CTBP1 C - 13 T vs. C - 0.433 (T) >1 (-) 9 (-) >0.05
rs2242278 chr4:1165516 SPON2 C - 13 A vs. G 0.225 (A) 0.242 (A) <1 (-) 0 (-) >0.05
rs79208163 chr4:1251483 CTBP1 [+7742bp] C - 12 T vs. C - 0.15 (T) >1 (-) 46 (-) >0.05
rs75127841 chr4:1251220 CTBP1 [+7479bp] C - 12 T vs. C - 0.15 (T) >1 (-) 46 (-) >0.05
rs59717591 chr4:1249233 CTBP1 [+5492bp] C - 12 A vs. G - 0.15 (G) <1 (-) 45 (-) >0.05
rs77125345 chr4:1126977 RNF212 [+19627bp] C - 13 T vs. C 0.05 (T) 0.083 (T) <1 (-) 49 (-) >0.05
rs55877603 chr4:1249222 CTBP1 [+5481bp] C - 12 A vs. G - 0.15 (G) <1 (-) 45 (-) >0.05
rs3894355 chr4:1233965 CTBP1 C - 13 A vs. G - 0.4 (A) >1 (-) 0 (-) >0.05
rs78037627 chr4:1250454 CTBP1 [+6713bp] C - 12 T vs. C - 0.15 (T) >1 (-) 45 (-) >0.05
rs62293577 chr4:1169273 SPON2 C - 13 T vs. C 0.133 (C) 0.15 (C) <1 (-) 0 (-) >0.05
rs17164382 chr4:1161190 SPON2 C - 13 T vs. C 0.05 (T) 0.083 (T) <1 (-) 49 (-) >0.05
rs2178443 chr4:1249707 CTBP1 [+5966bp] C - 12 A vs. C - 0.15 (C) <1 (-) 45 (-) >0.05
rs74440259 chr4:1160344 SPON2 [-376bp] C - 13 A vs. G - 0.083 (G) >1 (-) 46 (-) >0.05
rs11731643 chr4:1163650 SPON2 C - 13 T vs. C 0.242 (C) 0.092 (C) >1 (-) 18 (-) >0.05
rs2279280 chr4:1245386 CTBP1 [+1645bp] C - 12 A vs. G - 0.15 (A) >1 (-) 44 (-) >0.05
rs3755919 chr4:1243775 CTBP1 [+34bp] C - 12 T vs. C - 0.158 (C) <1 (-) 43 (-) >0.05
rs73793165 chr4:1247565 CTBP1 [+3824bp] C - 12 A vs. G - 0.15 (A) >1 (-) 44 (-) >0.05
rs1250088 chr4:1215585 CTBP1 C - 13 T vs. C 0.283 (C) 0.233 (C) >1 (-) 30 (-) >0.05
rs11726836 chr4:1152006 SPON2 [-8714bp] C - 13 A vs. G 0.05 (A) 0.083 (A) <1 (-) 48 (-) >0.05
rs17164373 chr4:1158526 SPON2 [-2194bp] C - 13 A vs. G 0.05 (A) 0.083 (A) <1 (-) 49 (-) >0.05
rs56401136 chr4:1194630 SPON2 C - 13 T vs. C 0.267 (C) 0.442 (T) <1 (-) 35 (-) >0.05
rs11538062 chr4:1165764 SPON2 C - 13 T vs. C 0.108 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs76966734 chr4:1164132 SPON2 C - 13 C vs. G 0.05 (G) 0.083 (G) >1 (-) 49 (-) >0.05
rs74856648 chr4:1240092 CTBP1 C - 3 A vs. G 0.025 (A) - >1 (-) 45 (-) >0.05
rs4974591 chr4:1113161 RNF212 [+5811bp] C - 13 A vs. G 0.35 (A) 0.242 (A) <1 (-) 31 (-) >0.05
rs3775110 chr4:1162022 SPON2 C - 12 A vs. G 0.05 (G) 0.083 (G) >1 (-) 53 (-) >0.05
rs12642797 chr4:1245990 CTBP1 [+2249bp] C - 13 A vs. G 0.492 (A) 0.233 (A) >1 (-) 4 (-) >0.05
rs77180393 chr4:1167865 SPON2 C - 13 A vs. G 0.05 (A) 0.083 (A) <1 (-) 48 (-) >0.05
rs17802266 chr4:1158991 SPON2 [-1729bp] C - 13 A vs. C 0.292 (A) 0.1 (A) >1 (-) 3 (-) >0.05
rs75307101 chr4:1130203 RNF212 [+22853bp] C - 12 A vs. T - 0.075 (A) >1 (-) 0 (-) >0.05
rs3775092 chr4:1240962 CTBP1 C - 13 C vs. G 0.492 (G) 0.25 (G) <1 (-) 4 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.