SPON2, chr4:1160720-1202750 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76717949 chr4:1169612 SPON2 C - 8 A vs. G - 0.042 (A) >1 (-) 48 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs878323 chr4:1169813 SPON2 C - 13 T vs. G 0.358 (G) 0.233 (G) >1 (-) 26 (-) >0.05
rs28660089 chr4:1115447 RNF212 [+8097bp] C - 13 A vs. G 0.092 (G) 0.15 (G) <1 (-) 0 (-) >0.05
rs13435166 chr4:1171703 SPON2 C - 13 C vs. G 0.183 (G) - >1 (-) 39 (-) >0.05
rs148518898 chr4:1119766 RNF212 [+12416bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs75777974 chr4:1220680 CTBP1 C - 13 T vs. C 0.067 (T) - <1 (-) 30 (-) >0.05
rs79844196 chr4:1169444 SPON2 C - 13 T vs. C 0.183 (T) - <1 (-) 39 (-) >0.05
rs1250103 chr4:1197552 SPON2 C - 13 A vs. G 0.275 (A) 0.375 (A) <1 (-) 25 (-) >0.05
rs73067776 chr4:1164461 SPON2 C - 13 A vs. G 0.175 (A) - <1 (-) 40 (-) >0.05
rs28578449 chr4:1167230 SPON2 C - 13 T vs. C 0.183 (T) - <1 (-) 39 (-) >0.05
rs6812059 chr4:1166171 SPON2 C - 13 T vs. C 0.183 (T) - <1 (-) 39 (-) >0.05
rs11726554 chr4:1163669 SPON2 C - 13 T vs. C 0.183 (T) - <1 (-) 40 (-) >0.05
rs11724575 chr4:1186876 SPON2 C - 13 T vs. C 0.067 (T) - <1 (-) 45 (-) >0.05
rs73067775 chr4:1164059 SPON2 C - 13 A vs. G 0.183 (A) - <1 (-) 40 (-) >0.05
rs6836335 chr4:1165748 SPON2 C - 13 T vs. C 0.183 (C) - >1 (-) 39 (-) >0.05
rs2279282 chr4:1216033 CTBP1 C - 13 C vs. G 0.467 (G) 0.375 (C) >1 (-) 0 (-) >0.05
rs875475 chr4:1192409 SPON2 C - 13 A vs. G 0.408 (G) 0.358 (A) <1 (-) 3 (-) >0.05
rs11731685 chr4:1163732 SPON2 C - 13 T vs. C 0.175 (C) - >1 (-) 40 (-) >0.05
rs6599284 chr4:1124038 RNF212 [+16688bp] C - 13 T vs. C 0.183 (T) - <1 (-) 40 (-) >0.05
rs17164384 chr4:1161480 SPON2 C - 13 T vs. C 0.183 (T) - <1 (-) 40 (-) >0.05
rs59465697 chr4:1157421 SPON2 [-3299bp] C - 13 C vs. G 0.183 (G) - >1 (-) 40 (-) >0.05
rs6599285 chr4:1125841 RNF212 [+18491bp] C - 13 A vs. G 0.183 (A) - <1 (-) 41 (-) >0.05
rs7690832 chr4:1159250 SPON2 [-1470bp] C - 13 T vs. C 0.183 (T) - <1 (-) 40 (-) >0.05
rs13115903 chr4:1194594 SPON2 C - 13 A vs. T 0.4 (T) 0.192 (T) <1 (-) 16 (-) >0.05
rs2306475 chr4:1207881 CTBP1 C - 13 T vs. C 0.358 (C) 0.4 (C) >1 (-) 0 (-) >0.05
rs7678661 chr4:1179047 SPON2 C - 13 A vs. G 0.183 (G) - >1 (-) 38 (-) >0.05
rs1481167 chr4:1110735 RNF212 [+3385bp] C - 13 T vs. C 0.158 (T) - <1 (-) 40 (-) >0.05
rs73065696 chr4:1148752 SPON2 [-11968bp] C - 13 A vs. G 0.183 (A) - <1 (-) 41 (-) >0.05
rs11734374 chr4:1136773 SPON2 [-23947bp] C - 13 A vs. G 0.183 (G) - >1 (-) 41 (-) >0.05
rs28621675 chr4:1130436 RNF212 [+23086bp] C - 13 C vs. G - - >1 (-) 41 (-) >0.05
rs11247974 chr4:1127972 RNF212 [+20622bp] C - 13 T vs. C - - <1 (-) 40 (-) >0.05
rs11732057 chr4:1131193 RNF212 [+23843bp] C - 13 A vs. G 0.183 (A) - <1 (-) 40 (-) >0.05
rs7690300 chr4:1112642 RNF212 [+5292bp] C - 13 T vs. G 0.183 (G) - >1 (-) 40 (-) >0.05
rs10027895 chr4:1151445 SPON2 [-9275bp] C - 13 T vs. C 0.183 (T) - <1 (-) 41 (-) >0.05
rs73065698 chr4:1148877 SPON2 [-11843bp] C - 13 A vs. G 0.183 (A) - <1 (-) 41 (-) >0.05
rs75690857 chr4:1153161 SPON2 [-7559bp] C - 13 C vs. G 0.183 (C) - <1 (-) 40 (-) >0.05
rs28785628 chr4:1145184 SPON2 [-15536bp] C - 13 C vs. G 0.183 (C) - <1 (-) 40 (-) >0.05
rs10002437 chr4:1157776 SPON2 [-2944bp] C - 13 T vs. C 0.183 (T) - <1 (-) 40 (-) >0.05
rs6820344 chr4:1185522 SPON2 C - 13 A vs. G 0.35 (G) 0.392 (A) <1 (-) 0 (-) >0.05
rs6839063 chr4:1183969 SPON2 C - 13 A vs. T 0.35 (T) 0.367 (A) <1 (-) 0 (-) >0.05
rs7676956 chr4:1120201 RNF212 [+12851bp] C - 13 A vs. G 0.183 (A) - <1 (-) 38 (-) >0.05
rs7679718 chr4:1120930 RNF212 [+13580bp] C - 13 C vs. G 0.183 (G) - >1 (-) 38 (-) >0.05
rs10002248 chr4:1118743 RNF212 [+11393bp] C - 13 A vs. G 0.183 (G) - >1 (-) 39 (-) >0.05
rs28856334 chr4:1178596 SPON2 C - 13 T vs. G 0.183 (T) - <1 (-) 39 (-) >0.05
rs147043452 chr4:1250215 CTBP1 [+6474bp] C - 8 T vs. C - - >1 (-) 21 (-) >0.05
rs6836158 chr4:1111594 RNF212 [+4244bp] C - 13 A vs. G 0.183 (G) - >1 (-) 40 (-) >0.05
rs28855974 chr4:1114909 RNF212 [+7559bp] C - 13 A vs. G 0.183 (G) - >1 (-) 39 (-) >0.05
rs4974540 chr4:1213463 CTBP1 C - 13 T vs. C 0.492 (T) 0.375 (T) >1 (-) 0 (-) >0.05
rs80297768 chr4:1177473 SPON2 C - 13 T vs. C 0.092 (C) - >1 (-) 46 (-) >0.05
rs140937756 chr4:1139124 SPON2 [-21596bp] C - 13 A vs. G - - <1 (-) 43 (-) >0.05
rs74678641 chr4:1134398 SPON2 [-26322bp] C - 13 T vs. C 0.183 (T) - <1 (-) 40 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.